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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
>>>>>>>>>
RAP2.2
<----------
DOF2
<---------
ARR11(3)
<---------
ARR11(1)
<---------
CCA1(2)
<---------
ARR14(2)
<---------
DAG2
--------->
AHL20(1)
--------->
ARR14(2)
<---------
ALFIN1
--------->
ARR11(3)
------->
TEIL
--------->
ARR11(3)
--------->
GLK1(2)
<---------
ARR11(3)
<---------
CCA1(2)
---------->
DOF2
<---------
At5g28300
<---------
AHL20(1)
<---------
ARR14(1)
<---------
ARR11(3)
<----------
DOF2
-----
--------
At4g35610
<-----------
GT1
--------->
YAB1
<-----------
GT1
<---------
GLK1(2)
------->
At4g35610
<---------
MYB46(3)
<---------
YAB1
----------------------->
TaNAC69(2)
atgctgaaatatatctaaattttagtcatttgttactcttcgtatctttatgctaatgaaaagatagttgtttttaccacctttctggtcaaattctgaa
9595900
------->
MYC2
<-------
MYC2
----
<-------
MYC3
----
<---------
ANAC58
--------->
ARR11(3)
<----------
DOF2
------->
MYC3
---------->
DOF2
----
<-----------
HVH21
<---------
ANAC58
<----------
DOF2
<---------
ATHB12
-->
TEIL
<------
ZmHOX2a(1)
<-----------
GT1
<---------
ATHB12
<---------
ARR11(3)
cctttggttatctggtttgtctactctaggaatgtgtcatgtcttttttccctcaaacgtgccattcattttctttagtaaaaggtcttcaatgactaca
9596000
--
<---------
TOE2(2)
<------
ZmHOX2a(2)
<---------
ANAC58
<------
MYB46(1)
--------->
ARR11(3)
<---------
ANAC58
<------
MYB83
--------->
ZAT18
<----------
DOF2
----
----->
ANAC58
---------->
DOF2
--------->
MYB111(1)
<-----------
GT1
----
----->
ANAC46
<-----------
HVH21
--------->
MYB59
---------->
DOF2
<---------
ARR11(3)
----->
ANAC58
<---------
ZAT6
<--------
P
<---------
ZAT14
<---------
DAG2
--------
agcaagcgtatgttatttagtgtcatttcatagagcgaagccttgtagtaggtcgaatagagtgcaaagaagtgtttactttatcagatcatataacaca
9596100
<---------
AHL20(1)
<---------
AHL20(2)
<---------
AHL20(2)
<-----------
GT1
--------->
AHL20(2)
--------->
ANAC55(2)
--------->
AHL20(2)
-------------
<---------
ANAC55(2)
--------->
AHL20(1)
<---------
HSFC1(2)
------->
YAB1
<---------
AHL20(1)
--------->
HSFC1(2)
----->
ANAC58
--------->
At4g35610
<---------
AHL20(2)
--------->
ANAC58
----->
ANAC58
<----------
DOF2
<----------
DOF2
--------->
AHL20(2)
--------->
ANAC58
<-
->
ZAT6
------->
TEIL
<---------
At4g35610
<---------
AHL20(2)
--------->
CCA1(2)
<-
agtatcatgtattttctttttgtttgctgatatttcttttgttactgagataattttattttatttgtattttagtcaagagacaagcttcttagagcat
9596200
------->
MYC2
<-------
MYC4
------->
MYC3
<-------
PIF5
<-------
MYC3
------->
PIF4
------->
MYC4
------->
PIF5
<-------
PIF4
--------->
ANAC58
<---------
TGA1a
--------->
ANAC58
--------->
ANAC46
--------->
TGA1a
------->
TEIL
<---------
ALFIN1
--------->
At4g35610
------->
MYC2
--------->
ARR11(3)
<-------
PIF5
----------->
HVH21
------->
PIF5
<---------
ANAC58
------->
MYC4
<-----------
RAV1(1)
------->
MYC3
<---------
REM1(1)
<-------
MYC2
-
--------->
ARR11(3)
<-------
MYC3
--
<---------
At4g35610
--------->
HSFB2a(1)
------
------->
TEIL
<---------
ANAC58
--------->
AHL20(2)
------->
TEIL
------
XXXXXXXXXXXXXXXXXXXX>
MIR419
<---------
MYB52(1)
<---------
MYB52(2)
------
--------->
ICU4
--------->
At4g35610
<---------
AHL20(2)
------->
GAMYB
<-------
MYC2
<-------
<---------
ATHB12
<---------
At4g35610
----------->
GT1
--------->
MYB46(3)
---------
-------->
WRI1
<---------
At4g35610
<---------
ARR11(3)
<------------
CBF
======================
MYC_MYB
--
--------
ANAC58
<-----------
RAV1(2)
<-----------
HVH21
--------->
MYB52(1)
<------------
CBF
--------
ANAC58
================
RAV
--------->
ANAC46
<-----------
HVH21
--------->
ALFIN1
<---------
ttcgagcaatgaatgctgcagatgttgctgaccaagttctccgtcaagttgataaattggtcagaaataacgaacgtgctgcacgtgaaaattggtcagg
9596300
--------->
At5g28300
---------->
GT1
------->
ANAC58
--->
ANAC58
--------->
KAN4(2)
<---
--->
AtLEC2
*
TSS
<---------
ICU4
------
--->
ANAC58
<----------
DOF2
<---------
YAB1
--------->
YAB1
----
RAV1(2)
<---------
DAG2
--------->
REM1(1)
<---------
YAB1
>
WRKY18(1)
<-----------
GT1
--------->
ZAT6
--------->
YAB1
--------->
O2
------
------->
ANAC58
<----------
DOF2
<----------
DOF2
<----------
DOF2
<---------
O2
<-------
--
HVH21
<---------
YAB1
------>
ZmHOX2a(1)
--------->
ANAC46
<---------
ICU4
--------->
YAB1
<---
caaggtaaatgttttgttttcattctttatttcctactttttcttt
agctctacatcacctttgatcattctgaccagtaacgtctcatgataaacctac
9596400
--------->
MYB52(1)
---------->
DOF2
<-----------
HVH21
------>
ZmHOX2a(2)
<---------
At4g35610
<---------
KAN4(2)
<------
ZmHOX2a(2)
<---------
YAB1
-------
DOF2
--------->
ARR14(2)
<---------------------
WRI1
>
MYB83
<-----------
GT1
--------->
ARR11(3)
--------->
LBD16
>
MYB46(1)
<---------
ARR14(2)
<---------
ALFIN1
<-----
--
MYB59
<-----------
RAV1(2)
<---------
ARR11(3)
<---------
ICU4
--------->
ICU4
<--------
------
DAG2
--------->
YAB1
--------->
At4g35610
<-----------
RAV1(2)
<---------
ATHB12
ttttcagaataaccaggtgattagtcatcaaaattcttgggatctgtcaaagaaacgaata
atgccccagggtgaagatgatacaatcaatggagaggtt
9596500
--------->
ZAT6
--------->
YAB1
--------->
ANAC58
--------->
ANAC58
--------->
ANAC58
--------->
ANAC58
--------->
ANAC46
-------->
ZAP1
--------->
SPL7
--------->
WRKY12
-----
<---------------
AtSPL3
----------->
HVH21
---------
--------------->
AtSPL8
------->
TEIL
<---------
REM1(2)
<--------
---
P
<---------
ANAC46
<-------
TEIL
<---------
ZAT2
------->
TEIL
--------->
GLK1(1)
-
AtMYB61
<---------
SPL7
--------->
AtLEC2
<---------
ATHB12
<---------
GLK1(1)
gctccgaagcgcgtacgccataatactaacatgcatttgacccagcaagttcaaacaaatgaatccctacagggacctgtctctatcaatggcatttcct
9596600
<----------
DOF2
<---------
ANAC58
<------
MYB83
<---------
MYB46(3)
<---------
WOX13(1)
--------->
YAB1
--------->
ATHB12
<------------
ATHB5
<---------
ICU4
------>
NtERF2
<--------
ATHB1
--------->
ZAT2
-------->
ATHB1
<---------
ZAT2
<---------
ZAT14
--------->
ICU4
<---------
ANAC58
<---------
At4g35610
<----------
DOF2
--------->
ZAT14
<---------
ATHB12
--------->
At4g35610
------->
GAMYB
--------->
WRKY38(1)
<---------
YAB1
<---------
ANAC58
--------->
ARR14(2)
--------->
MYB46(3)
--------->
WRKY12
<---------
ATHB51
<---------
ARR14(2)
->
ZmHOX2a(1)
<-------
GAMYB
--------->
MYB46(3)
<------
MYB46(1)
<------
ZmHOX2a(1)
<-------
>
ARR14(2)
<---------
At4g35610
------------>
ATHB5
--------->
At4g35610
--------->
ATERF1(1)
-
ARR14(2)
--------->
At4g35610
----------->
GT1
<---------
ANAC58
<------
ZmHOX2a(1)
ctggtaaccatctttcggacagtgagttgactccagtggaacaaatggtttcaatgattggtgctttgcttgctgaaggagacagaggagctgcctcact
9596700
<---------
ANAC46
<---------
At4g35610
-------
<---------
ANAC58
<------
<---------
YAB1
<-------
MYC3
--------->
CCA1(2)
------->
MYC3
--------->
GLK1(1)
--------->
TGA1a
<---------
GLK1(1)
--------->
YAB1
<---------
TGA1a
<---------
ARR14(2)
--------->
ANAC58
<---------
O2
<---------
ARR11(3)
--------->
ANAC58
--------->
O2
--------->
ARR14(2)
--------->
YAB1
<---------
TOE1(2)
<---------
YAB1
--------->
LBD16
----------->
GT1
<---------
ALFIN1
<-
--
ALFIN1
<-------
TEIL
<---------
ANAC58
--------->
YAB1
<-----------------
AGL1
tgaaattctcatttctaagcttcatccagatatgcttgctgatatagtaataacaagcatgaaacacttgcctagtacccctcccacgttggcaagttca
9596800
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AGI:
At1g27595.1
Description:
similar to ESP4 (ENHANCED SILENCING PHENOTYPE 4), binding [Arabidopsis thaliana] (TAIR:AT5G01400.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61552.1); contains domain PTHR15245:SF6 (PTHR15245:SF6); contains domain PTHR15245 (PTHR15245)
Range:
from: 9596347
to: 9603242
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.