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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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          >>>>>>>>>RAP2.2                 <----------DOF2
        <---------ARR11(3)             <---------ARR11(1)
       <---------CCA1(2)               <---------ARR14(2)                   <---------DAG2
      --------->AHL20(1)               --------->ARR14(2)                <---------ALFIN1
      --------->ARR11(3)               ------->TEIL        --------->ARR11(3)            --------->GLK1(2)
      <---------ARR11(3)              <---------CCA1(2)---------->DOF2 <---------At5g28300
      <---------AHL20(1)              <---------ARR14(1)   <---------ARR11(3)<----------DOF2   -----
--------At4g35610            <-----------GT1         --------->YAB1   <-----------GT1   <---------GLK1(2)
------->At4g35610         <---------MYB46(3)  <---------YAB1  ----------------------->TaNAC69(2)
 
atgctgaaatatatctaaattttagtcatttgttactcttcgtatctttatgctaatgaaaagatagttgtttttaccacctttctggtcaaattctgaa  9595900
                                                      ------->MYC2
                                                      <-------MYC2                              ----
                                                      <-------MYC3                              ----
                                                     <---------ANAC58           --------->ARR11(3)
                                       <----------DOF2------->MYC3          ---------->DOF2     ----
                               <-----------HVH21     <---------ANAC58<----------DOF2    <---------ATHB12
-->TEIL                  <------ZmHOX2a(1) <-----------GT1   <---------ATHB12   <---------ARR11(3)
 
cctttggttatctggtttgtctactctaggaatgtgtcatgtcttttttccctcaaacgtgccattcattttctttagtaaaaggtcttcaatgactaca  9596000
                                                                                                  --
     <---------TOE2(2)                                                              <------ZmHOX2a(2)
  <---------ANAC58                            <------MYB46(1)                      --------->ARR11(3)
  <---------ANAC58                            <------MYB83 --------->ZAT18 <----------DOF2      ----
----->ANAC58               ---------->DOF2   --------->MYB111(1)        <-----------GT1         ----
----->ANAC46     <-----------HVH21           --------->MYB59 ---------->DOF2       <---------ARR11(3)
----->ANAC58    <---------ZAT6              <--------P     <---------ZAT14 <---------DAG2   --------
 
agcaagcgtatgttatttagtgtcatttcatagagcgaagccttgtagtaggtcgaatagagtgcaaagaagtgtttactttatcagatcatataacaca  9596100
                                                        <---------AHL20(1)
         <---------AHL20(2)                             <---------AHL20(2)
         <-----------GT1                                --------->AHL20(2)
   --------->ANAC55(2)                             --------->AHL20(2)                  -------------
   <---------ANAC55(2)                             --------->AHL20(1)             <---------HSFC1(2)
------->YAB1                                       <---------AHL20(1)             --------->HSFC1(2)
----->ANAC58         --------->At4g35610           <---------AHL20(2)            --------->ANAC58
----->ANAC58<----------DOF2     <----------DOF2   --------->AHL20(2)             --------->ANAC58 <-
->ZAT6------->TEIL   <---------At4g35610          <---------AHL20(2)         --------->CCA1(2)    <-
 
agtatcatgtattttctttttgtttgctgatatttcttttgttactgagataattttattttatttgtattttagtcaagagacaagcttcttagagcat  9596200
                                                                                ------->MYC2
                                                                                <-------MYC4
                                                                                ------->MYC3
                                                                                <-------PIF5
                                                                                <-------MYC3
                                                                                ------->PIF4
                                                                                ------->MYC4
                                                                                ------->PIF5
                                                                                <-------PIF4
                                                                               --------->ANAC58
                                                                               <---------TGA1a
                                                                               --------->ANAC58
                                                                               --------->ANAC46
                                                                               --------->TGA1a
                                                                              ------->TEIL
                                                                             <---------ALFIN1
                                                                         --------->At4g35610
                                                                       ------->MYC2
                                --------->ARR11(3)                     <-------PIF5
                        ----------->HVH21                              ------->PIF5
                       <---------ANAC58                                ------->MYC4
                  <-----------RAV1(1)                                  ------->MYC3
                  <---------REM1(1)                                    <-------MYC2                -
                 --------->ARR11(3)                                    <-------MYC3               --
                <---------At4g35610                                   --------->HSFB2a(1)     ------
        ------->TEIL   <---------ANAC58          --------->AHL20(2)  ------->TEIL             ------
      XXXXXXXXXXXXXXXXXXXX>MIR419      <---------MYB52(1)         <---------MYB52(2)          ------
     --------->ICU4   --------->At4g35610        <---------AHL20(2)------->GAMYB<-------MYC2<-------
     <---------ATHB12 <---------At4g35610    ----------->GT1      --------->MYB46(3)       ---------
-------->WRI1<---------At4g35610<---------ARR11(3) <------------CBF======================MYC_MYB  --
--------ANAC58<-----------RAV1(2)     <-----------HVH21         --------->MYB52(1)    <------------CBF
--------ANAC58================RAV    --------->ANAC46  <-----------HVH21--------->ALFIN1  <---------
 
ttcgagcaatgaatgctgcagatgttgctgaccaagttctccgtcaagttgataaattggtcagaaataacgaacgtgctgcacgtgaaaattggtcagg  9596300
--------->At5g28300
---------->GT1
------->ANAC58
--->ANAC58                                                     --------->KAN4(2)                <---
--->AtLEC2                                    *TSS            <---------ICU4                  ------
--->ANAC58                       <----------DOF2             <---------YAB1          --------->YAB1
----RAV1(2)                      <---------DAG2  --------->REM1(1)                  <---------YAB1
>WRKY18(1)                <-----------GT1   --------->ZAT6 --------->YAB1    --------->O2     ------
------->ANAC58       <----------DOF2   <----------DOF2  <----------DOF2      <---------O2   <-------
--HVH21        <---------YAB1 ------>ZmHOX2a(1)  --------->ANAC46<---------ICU4   --------->YAB1<---
 
caaggtaaatgttttgttttcattctttatttcctactttttctttagctctacatcacctttgatcattctgaccagtaacgtctcatgataaacctac  9596400
                                                 --------->MYB52(1)
                                            ---------->DOF2
                                         <-----------HVH21
                                       ------>ZmHOX2a(2)
                                      <---------At4g35610
    <---------KAN4(2)                 <------ZmHOX2a(2)                   <---------YAB1
-------DOF2                          --------->ARR14(2)                  <---------------------WRI1
>MYB83<-----------GT1                --------->ARR11(3)         --------->LBD16
>MYB46(1)                            <---------ARR14(2)        <---------ALFIN1               <-----
--MYB59  <-----------RAV1(2)         <---------ARR11(3) <---------ICU4 --------->ICU4      <--------
------DAG2              --------->YAB1--------->At4g35610      <-----------RAV1(2)<---------ATHB12
 
ttttcagaataaccaggtgattagtcatcaaaattcttgggatctgtcaaagaaacgaataatgccccagggtgaagatgatacaatcaatggagaggtt  9596500
                   --------->ZAT6
                 --------->YAB1
           --------->ANAC58            --------->ANAC58
           --------->ANAC58            --------->ANAC58
           --------->ANAC46         -------->ZAP1
          --------->SPL7         --------->WRKY12                                              -----
      <---------------AtSPL3     ----------->HVH21                                         ---------
      --------------->AtSPL8  ------->TEIL                      <---------REM1(2)          <--------
---P <---------ANAC46       <-------TEIL<---------ZAT2    ------->TEIL                    --------->GLK1(1)
-AtMYB61<---------SPL7     --------->AtLEC2            <---------ATHB12                   <---------GLK1(1)
 
gctccgaagcgcgtacgccataatactaacatgcatttgacccagcaagttcaaacaaatgaatccctacagggacctgtctctatcaatggcatttcct  9596600
                                                            <----------DOF2
                                                           <---------ANAC58
                                                       <------MYB83
                                                      <---------MYB46(3)
                                                     <---------WOX13(1)
                                                   --------->YAB1
                                                   --------->ATHB12
                                                   <------------ATHB5
                                                   <---------ICU4                       ------>NtERF2
                                                   <--------ATHB1                    --------->ZAT2
                                                   -------->ATHB1                    <---------ZAT2
                            <---------ZAT14       --------->ICU4<---------ANAC58     <---------At4g35610
        <----------DOF2     --------->ZAT14       <---------ATHB12                   --------->At4g35610
    ------->GAMYB      --------->WRKY38(1)        <---------YAB1<---------ANAC58    --------->ARR14(2)
   --------->MYB46(3)  --------->WRKY12           <---------ATHB51                  <---------ARR14(2)
->ZmHOX2a(1)         <-------GAMYB   --------->MYB46(3)<------MYB46(1)    <------ZmHOX2a(1) <-------
>ARR14(2)            <---------At4g35610       ------------>ATHB5  --------->At4g35610--------->ATERF1(1)
-ARR14(2)            --------->At4g35610  ----------->GT1  <---------ANAC58        <------ZmHOX2a(1)
 
ctggtaaccatctttcggacagtgagttgactccagtggaacaaatggtttcaatgattggtgctttgcttgctgaaggagacagaggagctgcctcact  9596700
                                  <---------ANAC46
                                 <---------At4g35610                                         -------
                              <---------ANAC58                                               <------
                            <---------YAB1                                         <-------MYC3
                          --------->CCA1(2)                                        ------->MYC3
                          --------->GLK1(1)                                       --------->TGA1a
                          <---------GLK1(1)          --------->YAB1               <---------TGA1a
                         <---------ARR14(2)        --------->ANAC58               <---------O2
                         <---------ARR11(3)        --------->ANAC58               --------->O2
                         --------->ARR14(2) --------->YAB1                       <---------TOE1(2)
    <---------YAB1     --------->LBD16   ----------->GT1                        <---------ALFIN1  <-
--ALFIN1         <-------TEIL <---------ANAC58 --------->YAB1                 <-----------------AGL1
 
tgaaattctcatttctaagcttcatccagatatgcttgctgatatagtaataacaagcatgaaacacttgcctagtacccctcccacgttggcaagttca  9596800
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AGI:  At1g27595.1   
Description:  similar to ESP4 (ENHANCED SILENCING PHENOTYPE 4), binding [Arabidopsis thaliana] (TAIR:AT5G01400.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61552.1); contains domain PTHR15245:SF6 (PTHR15245:SF6); contains domain PTHR15245 (PTHR15245)
Range:  from: 9596347    to: 9603242    Orientation: Forward
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.