Search
Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
Go to graphical and table display
1 10 20 30 40 50 60 70 80 90 100
--------->
ANAC46
-----
<---------
ANAC55(2)
--------->
ANAC58
<-----
--------->
AtLEC2
--------->
ANAC58
----------->
GT1
------
--------->
ZAT14
--------->
DAG2
--------->
ANAC58
<----------
ID1
-----------
--->
MYB46(3)
<---------
ZAT14
---------->
DOF2
--------->
ANAC58
---------->
DOF2
<---------
RAP2.6(2)
->
MYB52(1)
--------->
ZAT6
<-------
TEIL
--------->
ANAC46
--------->
YAB1
<----------
DOF2
<
actctgaaacttcatatcagtacaatgcaaatacataaagtgatcaaactcacacaagacacattttctatcaaaaagaaaaaactttgcgactgacccg
8957500
--------->
CCA1(2)
<---------
ARR14(2)
<---------
ARR11(3)
--------->
ARR14(2)
<---------
TOE1(3)
--------->
LBD16
<---------
TOE2(3)
<---------
TOE2(3)
--------->
ARR14(2)
--------->
DAG2
---------->
DOF2
<---------
ATHB12
<---------
ARR14(2)
---------->
DOF2
---->
LBD16
------>
MYB46(1)
<------
ZmHOX2a(1)
<------
ZmHOX2a(2)
----
ANAC55(2)
--------->
MYB46(3)
<----------
ID1
<---------
ARR11(3)
--->
ANAC55(2)
<-----------
GT1
====================================
HOX2a_HOX2a
<----
>
HVH21
---------->
DOF2
------>
MYB83
--------->
ANAC58
--------->
ARR11(3)
<----
---------
YAB1
---------->
DOF2
--------->
ANAC58
<-------
TEIL
<-----------------
AGL1
tgattaaagttacaaagccaaagtaaccaatcgctcttaacatgtaaggaacaaatccagatatgagttcatcaagatcacactcgtaaaggaaatgact
8957600
<------
ZmHOX2a(2)
--------->
AGP1
<---------
ARR14(2)
--------->
ANAC58
--------->
ZAT18
--------->
DAG2
--------->
YAB1
<---------
YAB1
<---------
ANAC58
---------->
DOF2
<---------
YAB1
--------->
YAB1
<---------
ANAC58
--------->
HSFB2a(2)
<---------
ARR14(2)
--------->
ICU4
<-------
TEIL
<---------
HSFB2a(2)
--------->
ARR14(2)
<---------
ANAC58
--------->
GLK1(2)
-----
DAG2
--------->
ANAC58
<---------
GLK1(2)
<---------
ANAC58
<---------
GLK1(2)
---
------
DOF2
---------->
DOF2
<---------
ANAC46
---------->
DOF2
--------->
ARR14(2)
ttatgttctaaaaagcaaaacccagaaagggattctcataacaacttcgcttgtacagaaattataagagaaagagattcgtgcccagatcgaaattgag
8957700
<------
ZmHOX2a(1)
<------
NtERF2
--------->
LBD16
<---------
LBD16
<------
NtERF2
--------->
ATHB12
--------->
ATERF1(1)
--------->
ICU4
<---------
ATERF1(1)
--------->
At4g35610
--------->
ZAT14
<---------
DEAR3(1)
<---------
ANAC46
<---------
ZAT18
<-----------
HVH21
<---------
ANAC58
<---------
ZAT14
----------->
RAV1(2)
--------->
ANAC55(2)
<---------
MYB52(1)
--------->
GLK1(2)
<---------
ANAC58
--------->
CCA1(2)
--------->
YAB1
<----
<---------
ARR14(2)
--------->
ALFIN1
<------
ZmHOX2a(1)
--------->
MYB52(2)
----------->
GT1
<--
--------->
ALFIN1
--------->
DEAR3(1)
--------->
YAB1
<-----------
HVH21
<---------
YAB1
-----
------>
MYB52(1)
--------->
ETT(2)
<------
NtERF2
<------
ZmHOX2a(1)
<---------
ATHB12
-------
taagggtggagaac
ctggtcgccggaggagatggaggcgtaatcagaggaaggagagacgctgttagtggagtcactcat
gatggagtaagaagagaaga
8957800
--------->
HSFC1(2)
<---------
HSFC1(2)
<---------
HSFB2a(1)
--------->
ANAC58
----------->
HVH21
--------->
ANAC58
-----
ARR14(2)
<<<<<<<<<
SARD1
<---------
ICU4
----
-----
TEIL
<<<<<<<<<
CBP60g
--------->
AHL20(2)
--------->
WOX13(1)
---->
ARR14(2)
------>
MYB83
--------->
HSFB2a(1)
--------->
ALFIN1
<-----
---->
ARR10
------>
MYB46(1)
<----------
DOF2
<---------
ZAT14
<---------
WRKY38(1)
ttcactcactgaccaaaaccaaatttcatggaagcatctttgaataaatatcacaagagttgagagagagagaagtgagggagaatagtcaatgagagga
8957900
<<<<<<<<<
TBF1
<------------
<<<<<<<<<
TBF1
<---------
ANAC55(2)
--------->
ARR14(2)
----------->
GT1
<---------
ARR14(2)
---------->
DOF2
---------->
DOF2
<-----------
ARR10
------>
DOF2
<---------
YAB1
--------->
ALFIN1
<-----------
HVH21
<<<<<<<<<
TBF1
-
ZmHOX2a(1)
---------->
DOF2
*
TSS
XXXXXXXXXXXXXXXXXXX>
MIR156A-F
<---------
MYB46(3)
------
aaagaaaagaaacgtgaatcaaagaagaaatatgaa
aaacgatgagagaagagagtgaggcaaagaagttttgtcagagcggttcttcttcttcttcgtc
8958000
--------->
ATHB12
<---------
AHL20(2)
<--
<---------
YAB1
<------
ZmHOX2a(2)
--------->
AHL20(2)
<--
<-----------
TBP
<---------
MYB46(3)
--------->
ANAC55(2)
<----------
DOF2
---
<----------
DOF2
<---------
AtMYB61
--------->
ANAC46
---------->
ID1
--------->
YAB1
--------------->
AGL15
--------->
At4g35610
--------->
ANAC55(2)
<-----------
GT1
---
------------
ANAC81
--------->
ALFIN1
<----------
DOF2
<-----------
GT1
<---------
AHL20(2)
<---
---->
ID1
<------------
CBF
<---------
At4g35610
--------->
LBD16
<-----------
GT1
------>
ZmHOX2a(1)
ttcttcctttttattggataagcagtggtcgttttcagatcacactttctccctccgtaactattcacgtttttttctttttaattttcctatcacaaaa
8958100
<---------
DAG2
<----------
DOF2
<----------
DOF2
<---------
ANAC58
<----------
DOF2
<---------
ANAC58
<-----------
GT1
---------->
ID1
-------
AHL20(2)
<---------
MYB52(1)
-------
ICU4
<-------
GAMYB
<---------
MYB52(1)
------>
ATHB51
<---------
MYB46(3)
------>
AHL20(2)
--------->
MYB52(2)
<---------
MYB46(3)
<----------
DOF2
<-
------
AHL20(2)
<-------
TEIL
<-----------
GT1
------->
TEIL
--------->
MYB52(1)
<-
ttatttcttttcttttttggttcgttgctttatttctgtttgttatttggaaatggacctttaatgcatataacagaaaaattgcatatagttttctcaa
8958200
--------->
ICU4
--------->
YAB1
--------->
AHL20(2)
<---------
AHL20(2)
<---------
YAB1
<---------
AHL20(2)
<--
--------->
At5g28300
--------->
AHL20(2)
<----------
DOF2
------>
MYB46(1)
----------->
GT1
<<<<<<<<<
TBF1
<--
--------
DAG2
------>
MYB83
----------->
GT1
<---------
AHL20(2)
--------->
ANAC55(2)
<--
---------
DOF2
<---------
YAB1
-------->
P
--------->
ALFIN1
--------->
AHL20(2)
<---------
ANAC55(2)
<--
actttatgtcaaagtttttataaattcacctacaagggaagtgtggtaaatgtttgatataaattgtattatataattatgtattcttcttctttttttt
8958300
--------->
WRKY18(1)
----------->
GT1
<---------
CCA1(1)
<---------
TOE2(3)
<---------
RVE1(1)
<---------------
AtSPL3
--------->
ARR11(3)
<---------
AHL20(2)
<---------
ARR11(3)
<---------
MYB52(1)
<---------
ICU4
--------->
MYB52(1)
--------->
ANAC46
-------
AtLEC2
--------->
TOE1(2)
<---------
YAB1
--------->
ARR14(2)
--------->
TOE1(2)
-------
ANAC58
--------->
ANAC55(2)
--------->
ICU4
<---------
ARR14(2)
--------->
TOE2(2)
-------
ANAC58
<-------
TEIL
--------->
TOE2(3)
---------->
DOF2
<---------
ARR11(3)
<---------
-------
ANAC46
------->
TEIL
--------->
ANAC46
<---------
AHL20(2)
------->
TEIL
gcttggacgttgtttaatgtacgtatgaattgtatacctcattattcagatatttaaaagaaccggtcaaaatcatctattgaatctacgactctttgtt
8958400
Previous
Next
AGI:
At1g25500.1
Description:
choline transporter-related. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G13760.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42110.1); contains InterPro domain Protein of unknown function DUF580 (InterPro:IPR007603)
Range:
from: 8955236
to: 8957936
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.