Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                      --------->ANAC58                                                                              --------->ANAC58                                                                              --------->ANAC58                                                                            ---------->DOF2        -- -------ANAC58                                                           --------->ANAC58         --- -------ANAC58                                                           --------->ANAC46    -------- ------ZAT2                       <---------At4g35610                    --------->ANAC58 --------->TOE2(3) ->ZAT2              <---------ARR14(2)            --------->TOE2(3)    ------->GAMYB     --------->YAB1 --ZAT2              --------->ARR14(2)           --------->ZAT6 --------->TOE1(3)  --------->ANAC58 ->At4g35610   <-----------GT1    --------->At4g35610      --------------->AtSPL8 ---------->DOF2 <--   gctggtctgagagtattcaaccatatactcataggcatcagactgagcattaaccctagtctcagtaccttcaacaggcaaagcaaaagcatccataacg  8111600                                                        --------->LBD16                                                      <------NtERF2                                                      <---------LBD16                                                     ------>NtERF2       <-----------GT1                               --------->MYB52(1)   <---------ALFIN1 ------->ATHB12                                     <---------ALFIN1  --------->MYB46(3) ------>ICU4                             ------>ZmHOX2a(2)      <---------ANAC58 ->MYB52(1)         <---------At5g28300<---------ARR11(3)       <---------ANAC46 -------YAB1       <-----------GT1     --------->ARR11(3)       <---------ANAC58   atgattgtatcaccctcggttttaccctgcataagacccatgatctcgattgtgccaccggagcgagcgtgaaccaccatcttgagaagagcaagggctg  8111700                                                                                                  ---                                                                                               ------                                                                                               <-----                                                                                             --------                                                                                      <---------ARR14(2)                                                                                      --------->ARR14(2)                               <---------ATERF1(1)          <---------ANAC58          --------->ARR11(3)                           ------>ZmHOX2a(2)    <---------ZAT2                       <---------KAN4(1)                         --------->ARR14(2)     --------->ZAT2                       --------->KAN4(1)                         <---------ARR14(2)    ------>ZmHOX2a(1)          <------NtERF2      <-------                        <------ZmHOX2a(1)    ----------->RAV1(2)        <---------DEAR3(1) <---------                  --------->MYB111(1)   <---------ANAC58    <---------ANAC58        <---------KAN4(2)           <----------DOF2 ===========================HOX2a_HOX2a       --------->DEAR3(1)<----------  ----------->HVH21   --------->MYB59   <---------ANAC58    <---------ANAC46        ---------->TaMYB80   agatgtgaacgcgcttgaagtagttaggatcggaggcccatggcttctcctgctggattttggcttgtgaagcgtcgtcgtagtggaatatactgtcgga  8111800                                                                            ------>MYB83                                                                            ------>MYB46(1)                                                                         --------->HSFB2a(1)          <---------DEAR3(2)                                             <---------HSFB2a(1)          <------MYB46(1)                                                --------->HSFC1(2)          <------MYB83                                                   <---------HSFC1(2)          --------->MYB52(2)                                           <---------ARR14(2)        <---------MYB52(1)                                        <---------bZIP60(2)      <---------MYB46(3)                                          <---------ANAC46 ------>At4g35610                                              ----------->HVH21 --->ATERF1(1)                                               --------->At4g35610 -NtERF2<--------P                                           <---------At4g35610 ->ETT(1) <---------MYB46(3)                          --------->ANAC46 --------->ARR14(2) --ANAC46<---------MYB46(3)                  <---------CCA1(2) ----------->TGA1 --HVH21<---------MYB55(1)            --------->ZAT2 ------>ZmHOX2a(1)<------ZmHOX2a(1) -RAV1(1)<---------AtMYB61            <---------At4g35610   <---------MYB46(3)                    ---   ggctgaatcggttggttccactgggagaatgttgttctctagctcccatgtcttcctcgcgatggctgacgaggaaccttccattgaaatcgacttcgaa  8111900                                                                                                    <                                                                                                    <                                                                                            <--------                                                                                         --------->AGP1                                                                                         <---------ARR11(3)                                                                                         --------->ARR11(3)                                                                                        <---------GLK1(1)                      <----------DOF2                                     --------->ANAC58 ------>ZmHOX2a(2)                     <---------ANAC58                        ---------->DOF2            --------->GLK1(1) -------->GT1        <---------ANAC58--------->ATHB12    ---------->DOF2  --------->ANAC58<------ZmHOX2a(2)   gagtagaataaatctagggttttgcttaatcgcgagaattgatttgagggtttgagtcagaaagaaagaagaaggcaaacaaatagagagagatctttgg  8112000                                                        --------->ARR14(2)                                                        <---------ARR14(2)                                              <---------------AGL15                                              --------------->AGL15                    --------->HSFB2a(2)      <-----------------AGL1              <---------MYB52(1)             <-----------------AGL3                            <-----    ----------->GT1<---------ANAC58          --------->ANAC55(2)                              ------- ---------ANAC58   <---------ANAC46        <-----------GT1                         --------->TOE1(3) ---------ANAC58   <---------ANAC58        <---------AHL20(2)                      --------->TOE2(3)< --DOF2  <-----------GT1                *TSS <-----------------AGL2   --------->YAB1  <-----------GT1   gttcttgggttaaaccggtttgcgagaacaaaactcaaaatggatttacttaatatgggatttggggactaatgctaatccaaaacattaaccatataaa  8112100                                              <----------DOF2                                     <---------ARR11(3)                                     --------->AHL20(1)                 <---------------AtSPL8   ---------->ID1                 --------------->AtSPL8  <-----------GT1           --------->AHL20(1)        <---------AHL20(1)                         <---------ATHB12           --------->AHL20(2)        --------->ARR11(3)                   <---------HSFB2a(2)           <---------AHL20(2)       <---------AHL20(2)                    --------->HSFB2a(2)       -    <---------TOE2(3)            <---------AHL20(2)                    <---------YAB1               < <---------YAB1 <------------CBF--------->AHL20(2)  <---------YAB1   <----------DOF2               -- ----AHL20(2) <---------YAB1<---------YAB1<-----------GT1           <---------------AGL15       ----- -->AHL20(2)<---------AHL20(2)  <---------AHL20(2)<---------AHL20(2)--------------->AGL15     <------ ---------AHL20(2)          <---------AHL20(2)<---------DAG2      <-----------GT1   <-----------RAV1(1)   atttttatggaaatttaatattgtacattttttattaaatatttttccctttttatttttagtttgtttaacttttatagaaatcaatgttggcaaatca  8112200                                                                                          -----------                                                                          --------->AHL20(1) ---------->GT1                                             --------->ARR11(1)        ---------->DOF2 ------ZmHOX2a(1)       --------->MYB46(3)           <---------ALFIN1     <---------ARR11(3) --------->GT1         -------->P                  ----------->RAV1(1)    --------->ARR11(3) ----->DOF2           --------->WOX13(1)    <-----------RAV1(1)           <---------AHL20(1) ---ATHB12  <---------ATHB12            <---------ATHB12  ----------->ARR10 --------->TOE2(3) -------   aaggataaattccagtcattgtatcaaccaattggtatagaaatcaatgttggcaacacatagatttggcatacaatatcttaaatcacaaagcgtaaaa  8112300                                              --------->ATHB51                                              <---------ICU4                                           --------->YAB1                                          <-------TEIL                                        <-------MYC3                                        <-------MYC2                                     <---------ALFIN1                                              <-                               <---------GLK1(1)                                                   <-                               --------->GLK1(1)                                                   --                              --------->ARR11(3)                                                   <-                        <---------ANAC58------->MYC2             <---------At4g35610         --------               --------->AtLEC2--------->CCA1(2)     <---------------AGL15                   <------- >GT1     <---------At4g35610 <---------ARR11(3)   <-----------GT1                           -------- --->DOF2------->TEIL   <---------ANAC58------->MYC3>>>>>>>>>>>>>>>>>LFY <---------YAB1     <--------   gaagagtaatgcatctcatgcatatttcttgagatatccacacatgcataatttcaccaatgtagtaagcttattttgatagcatgttcaacttatatat  8112400          <---------ANAC58        <---------YAB1 --------ANAC46 --------ANAC58 --------->GT1                                    --------->WRKY18(1) --------ANAC58                               ---------->DOF2                      ---------->DOF2 ->AHL20(1)     <---------DAG2       <----------DOF2                             <------ZmHOX2a(2) <- --AHL20(1)     <----------DOF2     ------>ZmHOX2a(2)             <---------YAB1 ==================== ->ARR11(3)  <---------WRKY18(1)  --------->ARR11(3)         ---------->ID1--------->YAB1       <---- -CCA1(2) <---------ANAC58        <---------ARR11(3)    <----------DOF2   <---------YAB1 --------->At4g35610   tgtgtgaattatgcttgactttatggcatagacgttgatctttagctataaagtcaagcttttgtcttctcattctatcatcgatcaaagcatctaaatc  8112500  Previous    Next  AGI:  At1g22920.1    Description:  AJH1/CSN5A/JAB1 (COP9 SIGNALOSOME 5A). Identical to COP9 signalosome complex subunit 5b (CSN5B) [Arabidopsis Thaliana] (GB:Q8LAZ7;GB:O23130;GB:O82524;GB:Q84WE7); similar to AJH2/CSN5/CSN5B (COP9-SIGNALOSOME 5B), protein binding [Arabidopsis thaliana] (TAIR:AT1G71230.1); similar to putative JUN kinase activation domain binding protein [Medicago sativa] (GB:AAC26484.1); contains InterPro domain Mov34-1 (InterPro:IPR003639); contains InterPro domain Mov34/MPN/PAD-1 (InterPro:IPR000555) Range:  from: 8109703    to: 8112040    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.