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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
--------------->
AGL15
------>
ZmHOX2a(1)
<---------------
AGL15
------->
MYC2
------->
PIF5
<-------
MYC4
------->
MYC4
<-------
MYC2
------->
MYC3
<-------
MYC3
<-------
PIF5
<<<<<<<<<<
ABI5
--------->
ANAC55(2)
<---------
ANAC55(2)
<<<<<<<<<<
AtMYC2
--------->
bZIP60(2)
<<<<<<<<<<
HY5
--------->
TGA1a
<---------
O2
--------->
O2
--------->
TOE1(3)
<--------
ABF1
<---------
MYB59
<---------
TGA1a
--------->
DEAR3(1)
--------->
LBD16
------>
NtERF2
<---------
At4g35610
<---------
ALFIN1
<---------
LBD16
<---------
ALFIN1
--------->
At4g35610
--------->
AtMYB61
--------->
MYB52(1)
<------
NtERF2
<---------
YAB1
--------->
MYB46(3)
--------->
ARR14(2)
------>
NtERF2
--------->
MYB52(1)
<-----------
GT1
<---------
ARR14(2)
<-----------------
PIF3(1)
--------->
ICU4
<---------
ICU4
---------->
DOF2
<-----------
HVH21
----------->
RAV1(1)
--------->
YAB1
--------->
ANAC58
-------->
ANAC46
------>
NtERF2
--------->
MYB46(3)
--------->
ANAC58
--------
-------->
ANAC58
<---------
ETT(1)
<---------
MYB46(3)
--------->
TOE2(3)
----------->
GT1
-------->
ANAC58
--------->
ANAC46
<---------
ANAC46
<---------
ANAC55(2)
----------->
GT1
acgcgccacgtgtcctcttattagcaaactccgacataatggtagccgagagcgggtaatcaccaccgatacctaaaccaagaaagaaccggaaaaaacc
7258300
--------->
ANAC58
--------->
ANAC58
--------->
ANAC55(1)
--------->
ANAC46
--------->
ANAC58
---------->
DOF2
-
<---------
REM1(2)
--------->
MYB52(1)
--------->
YAB1
-
<---------
ZAT14
--------->
AtMYB61
<---------
ICU4
-
--------->
ZAT14
------->
GAMYB
--------->
ICU4
--
--------->
ZAT18
--------->
ANAC58
--------->
YAB1
<-
<---------
TGA1a
--------->
ANAC58
--------->
YAB1
<--
====================================
MYC_MYB
<------
ZmHOX2a(2)
---
<---------
O2
<---------
LBD16
--------->
MYB46(3)
<---------
YAB1
<---
============================
bZIP_DOF
--------->
YAB1
----
============================
bZIP_DOF
<---------
TOE1(3)
----
--------->
DEAR3(2)
--------->
DAG2
<---------
TOE2(3)
<------
--------->
TOE1(3)
<---------
ZAT18
--------->
ANAC58
--------->
ARR11(3)
--------->
LBD16
--------->
YAB1
--------->
TGA1a
---------->
DOF2
--------->
At4g35610
<---------
ANAC46
--------->
TOE2(3)
--------->
ALFIN1
--------->
MYB46(3)
<---------
ARR11(3)
<---------------
->
MYB52(1)
--------->
ZAT6
<---------
AtMYB61
--------->
RAP2.6(2)
<------
ZmHOX2a(1)
---------->
DOF2
<----
gaggctaaccataacacaagaccgacgagtggtgcacacggaaaagccacaaccaaaggagctaaggatcataataatcaaacaaagtccgtagactcgg
7258400
------>
MYB46(1)
------>
MYB83
===============================================
MYC_MYB
--------->
DREB2C(2)
------->
GAMYB
--------->
DEAR3(2)
------>
NtERF2
-------->
DEAR3(1)
-------->
MYB46(3)
--------->
LBD16
---------->
HVH21
<---------
O2
------->
ATERF1(1)
--------->
O2
<---------
ANAC58
-----
NtERF2
<---------
WRKY38(1)
===========================
bZIP_DOF
-------
ATERF1(1)
===========================
bZIP_DOF
<---
--->
NtERF2
<---------
WRKY12
--------->
WRKY38(1)
<---------
ANAC58
------
------
DEAR3(1)
------->
GAMYB
--------->
TGA1a
<---------
ANAC46
--------->
ALFIN1
------->
HVH21
==========================
MYC_MYB
<---------
DEAR3(1)
<---------
DEAR3(1)
----->
DEAR3(1)
--------->
DEAR3(1)
--------->
WRKY12
--------->
DAG2
--------->
RAP2.6(3)
---
DEAR3(1)
----------->
HVH21
----------->
HVH21
------>
NtERF2
<-----------------------
TaNAC69(2)
--------
TaNAC69(2)
--------->
MYB52(1)
<---------
TGA1a
---------->
DOF2
---------->
DOF2
<------
--
NtERF2
<-----------
HVH21
--------->
ZAT6
<---------
ANAC46
<---------
SPL7
--------->
MYB52(1)
cgacgaccgactcggtcaccgaggtaaccgaagactagttgacccgtggctgtgccgagtaaagcgatggcgtaagaagttgaaagaacggctgtgttga
7258500
--------->
At5g28300
----------->
GT1
<---------
DEAR3(2)
<---------
DEAR3(1)
<---------
WRKY18(1)
<-----------
HVH21
----------->
HVH21
<---------
ANAC58
-
<--------
HAHB4
<---------
SPL7
----
--------->
YAB1
------>
ZmHOX2a(2)
<----
<-------
GAMYB
<---------
ICU4
<------
ZmHOX2a(2)
--------->
LBD16
<---------
At5g28300
--------->
ICU4
--------->
ARR11(3)
--------->
ANAC46
------
WOX13(1)
<---------
ATHB12
<---------
ARR11(3)
--------->
ANAC58
--->
ATHB12
<---------
ICU4
--------->
YAB1
--------->
AtLEC2
<---------
ANAC58
<---------
LBD16
---
YAB1
--------->
YAB1
<---------
AtLEC2
---------->
DOF2
<---------
At1g77200
--------->
ANAC58
ttgagtcaccgttgtaataaacatgactaatcattttcatgaccggtgctatgcagaaaagatcgtatgcgtcggtgaatagacccattcccgctactat
7258600
<------
MYB83
<----------
DOF2
<------
MYB46(1)
<---------
DAG2
<---------
TOE1(2)
--------->
TOE2(3)
--------------->
AGL15
<---------------
AGL15
----------------->
AG
<-
----------------->
AGL1
-------
--------->
ANAC58
<---------
TOE2(2)
<---------
ARR14(2)
--------->
ANAC46
<---------
MYB52(1)
--------->
GLK1(2)
<----------
DOF2
--------->
ANAC58
--------->
ATHB12
--------->
GLK1(2)
----->
ZmHOX2a(2)
---------->
DOF2
<-----------------
AGL1
<---------
ARR14(2)
----->
YAB1
--------->
REM1(1)
<---------
ARR11(3)
<---------
MYB46(3)
--------->
ARR14(2)
-----
YAB1
<---------
YAB1
<-------
TEIL
------>
NtERF2
<------
NtERF2
<---------
At4g35610
<-
gatcgctttgaaatggtaccattgtgttcgagctacatcaagcgacgacaatacctttatcggcat
cgttggtttttttatctgagattccgaatccaga
7258700
------
-------
<---------
YAB1
----------->
GT1
--------->
ICU4
<---------
YAB1
<-----------
GT1
<---------
ICU4
<----------
DOF2
<----------
DOF2
<---------
HSFC1(2)
------>
ZmHOX2a(2)
<----------
DOF2
--------->
HSFC1(2)
<------
ZmHOX2a(2)
<------------------------
ANAC81
--------->
HSFB2a(1)
<---------
ARR11(3)
<------------------------
ANAC81
----------->
GT1
--------->
ICU4
<---------
ARR14(2)
---------
DOF2
<---------
ANAC58
--------->
MYB52(2)
<---------
YAB1
--------->
GLK1(2)
-->
LBD16
<------------------------
ANAC81
<---------
HSFB2a(1)
--------->
ARR11(3)
--------
DAG2
<---------
ANAC58
<---------
MYB46(3)
--------->
YAB1
--------->
ARR14(2)
gctttttttttttttttttgcttctttccttttggtttgttatatcgaaatttcgaattcatgatgagtgaaacagaacaaggatctttataacgattaa
7258800
<---------
YAB1
<---------
YAB1
<------------
CBF
--------->
KAN4(1)
<---------
DAG2
<---------
KAN4(1)
<------
ZmHOX2a(1)
<----------
DOF2
<----------
DOF2
<---------
KAN4(2)
--------->
HSFB2a(2)
<-------
--->
YAB1
---------->
ID1
--------->
ATHB12
---------->
TaMYB80
--------->
LBD16
--------
-->
AHL20(2)
<---------
YAB1
<---------
AtLEC2
--------->
ARR11(3)
<---------
MYB52(1)
<-
taagtctctttgtcattttcattactttattggtatgagcatggaatatgcttatgattttgactccgaggaagacttagtcagtttgtttgtaagagct
7258900
--------------->
AtSPL3
--------->
ZAT14
--------->
ATHB51
<-------
TEIL
<---------
YAB1
<---------
DEAR3(2)
<-----------
RAV1(1)
--------->
ICU4
<---------
MYB46(3)
<<<<<<<<<
GATA-1
<---------
TOE2(3)
<---------
DEAR3(1)
<-----------
GT1
---------->
DOF2
<---------
ICU4
<---------
MYB52(1)
--
ARR11(3)
<---------
bZIP60(1)
--------->
YAB1
<-----------
GT1
->
ARR11(3)
--------->
bZIP60(1)
<---------
YAB1
<-----------
GT1
<-----------
HVH21
---------
DOF2
<-----------------
AGL1
<------------
CBF
--------->
AHL20(2)
tctttttatctatgttgtcacattaaggcacaacatcataattgtttgaatttttctagccaaattaaaccgtcggttcagtactgttttagtttcggtt
7259000
<---------
ALFIN1
----------->
RAV1(1)
------->
GAMYB
--------->
MYB52(1)
--------->
ANAC58
--------->
ANAC46
--------->
ANAC55(2)
------
--------->
ANAC58
----------->
RAV1(1)
<---------
ARR14(2)
<-----
<---------
MYB111(1)
--------->
ZAT6
--------->
ARR14(2)
------
<---------
ZAT14
--------->
ANAC55(1)
<---------
GLK1(2)
------
--------->
CCA1(2)
<---------
ANAC55(2)
--------->
MYB52(1)
<------
<---------
ANAC55(2)
--------->
At5g28300
--------->
ANAC46
<-----------
GT1
-------
--------->
ANAC55(2)
----------->
GT1
<---------
MYB52(2)
--------->
YAB1
<------
tgatcacttattgagaaatgagaacagtaactactaacaagtaacagcaacactgccaacacagaaacaatattaacggattctcagttt
gatgaaatca
7259100
<---------
O2
==================
bZIP_DOF
<---------
ANAC55(2)
--------->
O2
--------->
ANAC58
--------->
ANAC58
--------->
TGA1a
--------->
ARR11(3)
--------->
bZIP60(1)
----------->
GT1
--------->
ANAC55(2)
--------->
MYB52(1)
--------->
ANAC58
--------->
bZIP60(2)
--->
ATHB12
--------->
ANAC58
<---------
bZIP60(1)
<-----------
GT1
----
ICU4
--------->
AtLEC2
<---------
TGA1a
<---------
ARR11(3)
-->
ATHB1
--------->
GLK1(1)
==================
bZIP_DOF
--->
YAB1
<---------
CCA1(1)
<-----------
HVH21
---------->
DOF2
<---------
ANAC58
---
YAB1
--------->
ARR14(2)
--------->
GLK1(2)
--------->
DAG2
<---------
ANAC58
-->
ICU4
<---------
ARR14(2)
<---------
ARR11(3)
---------->
DOF2
<---------
AtLEC2
---
ATHB12
<---------
RVE1(1)
--------->
ARR11(3)
------>
ZmHOX2a(1)
<---------
YAB1
<----------
DOF2
ttgtgaaaacggatatttagcaaaatcatgcaaaatctacagagtcacgtcctaaaagtaaaagatttatccttgcatgctgtttgattcgctttccttc
7259200
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AGI:
At1g20860.1
Description:
phosphate transporter family protein. Identical to Inorganic phosphate transporter 1-8 (PHT1-8) [Arabidopsis Thaliana] (GB:Q9SYQ1;GB:Q1PFU6); similar to phosphate transporter family protein [Arabidopsis thaliana] (TAIR:AT1G76430.1); similar to General substrate transporter [Medicago truncatula] (GB:ABN06033.1); contains InterPro domain Major facilitator superfamily MFS-1 (InterPro:IPR011701); contains InterPro domain Major facilitator superfamily; (InterPro:IPR007114); contains InterPro domain Sugar transporter, conserved site; (InterPro:IPR005829); contains InterPro domain MFS general substrate transporter (InterPro:IPR016196)
Range:
from: 7253996
to: 7258666
Orientation: Reverse
Links:
TAIR
MIPS
AGI:
At1g20870.1
Description:
similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G54850.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66281.1); contains InterPro domain HSP20-like chaperone (InterPro:IPR008978)
Range:
from: 7259091
to: 7260764
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.