Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                            <---------MYB52(1)                         --------->LBD16                        --------->ANAC55(2)                        --------->ANAC46                        <---------ANAC55(2)                        ----------->GT1                                                   --------->GLK1(2)                       <-------TEIL                                                      <---------GLK1(2)                     --------->AGP1                                                      <---------ARR14(2)                     <---------ARR11(3)                                        --------->ANAC55(2)                     <---------ARR14(2)                                        --------->ANAC55(1)                     --------->ARR14(2)                                        ----------->GT1       ----------->GT1<------ZmHOX2a(2)                                        --------->ANAC58      ------>ZmHOX2a(2)------>ZmHOX2a(2)               <---------ARR14(2)      <---------ANAC55(2)   --------->ATHB12 --------->GLK1(1)            <-------TEIL                  --------->ANAC46  <---------YAB1    <---------GLK1(1)       <-----------RAV1(2)    --------->YAB1      <---------YAB1 -------->YAB1    --------->LBD16          <------ZmHOX2a(2)   ---------->DOF2 --------->ANAC58     -   aaacatgatcggaaaatttccgagatccgtaacttgaaattggcgatcaggttcgagtattcagtaaaagaataacaaaaaacgtaattccgattctgaa  7128500                                                     <---------ANAC58                                                     <---------ANAC46                                                     <---------ANAC58                                                 <---------GLK1(1)                                              --------->LBD16                                            <---------LBD16 --------->GLK1(2)                                     <-------TEIL<---------At4g35610                       ---------->DOF2     --------->MYB52(1)             --------->YAB1          ----------->GT1     --------->AHL20(2) --------->GLK1(1)       <---------YAB1            <-         ------->TEIL--------->AtMYB61     <---------At5g28300 --------->MYB59                   <--- --------->DOF2---------->DOF2<---------AHL20(2)--------->ARR14(2)<--------P                   <-----   atgaaagaatgaacgtgaaaagaccaaaagaaataaatattcatttaccggagatgcttgaaaatcaggtagactatgatagcgatgttgaggcgctcgt  7128600          --------->ATHB12          <---------ICU4          --------->YAB1                                               ------>NtERF2      <------ZmHOX2a(1)                                        <---------CCA1(2)     <------MYB83                                            <---------ALFIN1     <------MYB46(1)                                       ------>NtERF2                    <--------    --------->MYB59                                       --------->ANAC58                  ---------   <--------P                                             --------->RAP2.6(2)             <---------MYB46(3) <------MYB46(1)                                          --------->ANAC46                --------->MYB55(2) <------MYB83                             <---------AtMYB61<------NtERF2                  --------->ABI4(2) -------P<---------YAB1--------------->AtSPL8             --------->ANAC58          --------->MYB52(1) ------REM1(1) <---------YAB1           <----------DOF2  --------->SPL7--------->LBD16   --------->ALFIN1 --GAMYB --------->ICU4<---------------AtSPL3          <---------SPL7<---------LBD16<---------DOF5.7(2)   tgtaggtaggaatgattatgctatacttgtacttcttctctcctttggtctccatctcgtccgccatctcttccggcgagttttggtaacggtggttcct  7128700                      <------NtERF2                      --------->ATERF1(1)                     <-----------HVH21                     <---------RAP2.6(3)            ----------->GT1                                 <                    --------->DEAR3(1)         --------->YAB1                     <-----------------AGL1         <-----------HVH21                   <---------AHL20(2)                   <-----------------AGL3         --------->LBD16                     --------->AHL20(2)          --------->ANAC58           -        ----------->GT1            *TSS  <------ZmHOX2a(1)               --------->ANAC58           -        <---------ANAC55(2)        --------->YAB1 <---------ICU4        --------->DAG2        <------ -ARR14(2)        --------->At4g35610   --------->ICU4                 ---------->DOF2 <------------CBF >ARR14(2)        <---------At4g35610  <---------TOE2(3)        <----------ID1    <-----------------AGL2   tcgtcttaacccgtgaaatcagccgtcgtctgtacaaaaataaggattaaaataatgtcaaatatagggactaaaaagcaagtttctcaaattgggccta  7128800                                      ---------->DOF2                     *TSS                               --------->WOX13(1)                      <---------At4g35610     ------                              <---------AHL20(2)                       --------->At4g35610     ------ ---------AHL20(2)            --------->AHL20(2)    ----------->GT1    ----------->RAV1(2)    ------- -------->AHL20(2)         --------->YAB1  <----------DOF2      --------->WOX13(1)            ------- ---------->TBP  ---------->DOF2     <------ZmHOX2a(1)       <-----------HVH21                ------- ---MYB59     ----------->TBP--------->AHL20(2)---------->DOF2------------>CBF        <----------DOF2   atataaatatgggcctatataaagcccaaaaataaatcaggaaagctttaaaagaggtaaactcgtcaatcgcatctgagtcgctcttctttccttccgc  7128900       <----------DOF2    <-----------GT1 <---------AHL20(2) >NtERF2                                                                                      <------ --->LBD16                                          <---------ANAC46                          ------- -->ANAC58                                    <---------TOE1(3)                           ----------- -->ANAC46               ---------->DOF2      <---------TOE2(3)      --------->At4g35610--------->LBD16 -->ANAC58           <---------ZAT6      --------->WOX13(1)  ---------->DOF2         --------->MYB52(1)   catttttttctttctaggttgcagagttaaaggagaaggttttcaattagggttttgtagagagaaagatgagccgaagtttgggaataccggtgaagct  7129000                             --------->ALFIN1                          <---------DEAR3(1)                          <---------DREB2C(2)           <-----------RAV1(2)   <---------At4g35610                     <---------ZAT6          <------NtERF2   <---------ANAC46        <----------DOF2      <---------ANAC46   --------->ANAC46    ----------->HVH21     --------->DEAR3(1)        <---------ANAC58         -----   --------->O2        ----------->TGA1     <------NtERF2              <---------ANAC58         <----   <---------O2      <---------ANAC58     <---------DEAR3(1)        <---------WOX13(1)          <---- ---HSFC1(2)      <---------CCA1(2) ---------->DOF2               --------->ATHB12          <-------- -->HSFC1(2)  <-----------HVH21  --------->At4g35610             <---------YAB1           <---------- >HVH21------>NtERF2 <---------ANAC58 ---------->DOF2      <------ZmHOX2a(1)   <------ZmHOX2a(1)-----   tcttcacgaggcctcaggtcatatcgtgacggtggagctaaagagcggcgagctttacagaggaagtatgattgagtgtgaggataactggaactgtcag  7129100                                                           <---------AHL20(2)    --------->ARR11(3)                         <------ZmHOX2a(2)    <---------ARR14(2)                        --------->ARR11(3)    <---------ARR11(3)                        <---------ARR11(3)    --------->ARR14(2)                        --------->ARR14(2)   <------ZmHOX2a(1)                          <---------ARR14(3) ---->At4g35610                               --------->ARR14(3) -----ZAT2                                    <---------ARR14(2) -----At4g35610   ------>NtERF2<---------At4g35610        --------->AHL20(2) ---HVH21      <---------At5g28300            <---------AGP1                               <---------ANAC58 --AtMYB77<---------ANAC46     --------->At4g35610    <-------TEIL                         <---------ANAC58 ---->ZAT2<---------ANAC55(2) --------->MYB52(1)------>ZmHOX2a(2)                    <---------TOE2(2)   ctcgaggatattacttataccgccaaggtaatcaactgatactctgaagatctcgattcattttatatgagactgttttttgaaccataggtttcgtttc  7129200                                            --------->At4g35610                                            <---------At4g35610                                            --------->ZAT2                                            <---------ZAT2                                       <------MYB83                                   --------->ARR11(1)                                <---------AHL20(2)                      <-------GAMYB<---------ARR14(2)                       <---------ANAC58           <---------TOE2(3)     ----------->ARR10                    <---------TOE2(3)  <XXXXXXXXXXXXXXXXXXXXXXXMIR829.1 <---------GLK1(2) <---------ARR14(2)  <---------WOX13(1) <---------AHL20(2)  ----------->GT1   <------MYB46(1)    <---------ANAC46  <---------ANAC58 <---------YAB1    <---------ZAT18 --------->ARR14(2)--------->ARR14(2)<<<<<<<<<RAP2.2   aatttcattgtttgatgttagtgctgttaaaaccctagatttggtgagctgggcaaatttgctgggaaattttagattgcttcttattttaagttctaag  7129300                                                          ----------->HVH21                                                    ------>ZmHOX2a(1)                                                  ------>ZmHOX2a(2)                                                --------->ARR11(3)                   <-------TEIL                 <---------ARR11(3)                                 --           --------->TOE2(3)                <---------ANAC58                        <---------ANAC46        <---------ARR14(2)                  --------->ANAC55(2)                 --------->ZAT14   <--        --------->ARR14(2)                  <---------ANAC55(2)                 <---------ZAT14 =====        --------->GLK1(2)----------->GT1    <---------ANAC46               <---------YAB1       <----     <---------TOE2(3)   <---------ANAC46   <---------ANAC58         --------->AHL20(2)         -----   tgagattaagaatccttgaaattcatgctgtataaaaccctagaatgcgtgatcctgccagtgacattagataaattttgactgtagggtatagtctcct  7129400  Previous    Next  AGI:  At1g20575.1    Description:  dolichyl-phosphate beta-D-mannosyltransferase, putative / dolichol-phosphate mannosyltransferase, putative / mannose-P-dolichol synthase, putative. similar to glycosyl transferase family 2 protein [Arabidopsis thaliana] (TAIR:AT2G39630.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62025.1); contains InterPro domain Glycosyl transferase, family 2 (InterPro:IPR001173) Range:  from: 7126762    to: 7128735    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g20580.1    Description:  small nuclear ribonucleoprotein, putative / snRNP, putative / Sm protein, putative. similar to SMD3 (SNRNP CORE PROTEIN SMD3) [Arabidopsis thaliana] (TAIR:AT1G76300.1); similar to unknown [Picea sitchensis] (GB:ABK21888.1); contains InterPro domain Like-Sm ribonucleoprotein, core; (InterPro:IPR001163); contains InterPro domain Like-Sm ribonucleoprotein, eukaryotic and archaea-type, core; (InterPro:IPR006649); contains InterPro domain Like-Sm ribonucleoprotein-related, core (InterPro:IPR010920) Range:  from: 7128874    to: 7130632    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.