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Chromosome 1
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Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<---------
ARR14(2)
<---------
TOE1(3)
--------->
YAB1
<---------
TOE2(3)
<---------
ZAT6
<---------
ANAC46
<----------
DOF2
<------
NtERF2
--------->
ARR11(3)
--------->
At4g35610
<---------
GLK1(2)
--------->
CCA1(2)
----------->
HVH21
<---------
At4g35610
--------->
ARR14(2)
--------->
ARR11(1)
---------->
DOF2
------>
NtERF2
<---------
ARR11(3)
--------->
ARR11(3)
<----------
DOF2
<---------
MYB46(3)
<---------
ARR14(2)
<---------
ARR14(2)
<---------
TOE2(3)
---------->
DOF2
--------->
MYB55(2)
<---------
YAB1
----------->
GT1
-----
GAMYB
<---------
DEAR3(1)
--------->
ALFIN1
--------->
YAB1
<---------
ZAT14
------
MYB46(3)
--------->
At4g35610
<---------
DEAR3(1)
--------->
ICU4
--------->
ZAT14
<---
-----
YAB1
<---------
ORA47(1)
------->
GAMYB
------>
NtERF2
--------->
GLK1(2)
----------->
ARR10
ggttgaggctttaaggccggtgaaagatgggattgcaacggtggctgaggttactgaggccat
gatgaagattcttttagagtagtgataagatttgggt
7043300
--------->
DAG2
*
TSS
---------->
DOF2
<---------
MYB46(3)
---------->
DOF2
<---------
ANAC46
<---------
ANAC46
---------->
ID1
----------->
GT1
------------>
CBF
--------->
ANAC58
<---------
TOE2(3)
<---------
AtMYB61
--------->
ALFIN1
<------
ZmHOX2a(1)
--------->
ANAC58
-------
DOF2
<----------
DOF2
<-----------
RAV1(1)
--------->
CCA1(2)
---------->
DOF2
tttaagtttttcgtttagctttggttcgatcgagtttatgagtttttatgtgg
tgaaagagagaaagtgagataggacaatggatggctctaaaagcaaa
7043400
<---------
TGA1a
<---------
O2
<---------
bZIP60(2)
----------->
HVH21
<---------
TGA1a
<---------
ANAC46
----------->
GT1
<---------
ANAC58
<---------
WOX13(1)
<---------
ANAC58
<--------
P
<---------
bZIP60(1)
=============================
MYC_MYB
==================================
MYC_MYB
<------
MYB46(1)
--------->
bZIP60(1)
<------
MYB83
--------->
TGA1a
<---------
MYB46(3)
<---------
O2
<------
ZmHOX2a(1)
<------------
CBF
--------->
O2
<---------
ANAC46
--------->
ATHB12
<---------
GLK1(2)
<---------
bZIP60(2)
<---------
YAB1
--------->
ARR11(3)
--------->
ICU4
---------->
DOF2
<---------
WOX13(1)
<---------
bZIP60(2)
--------->
ALFIN1
<--
================================================
bZIP_DOF
<---------
ANAC46
---
ctccataaaaaaacaagttatctataaagacgcgttgtgattggttgattttagatactgtgtcgtgacatggcattatgaggtggaggatgtttgtcca
7043500
<---------
ANAC46
<---------
TGA1a
--------->
ANAC55(2)
<---------
ANAC55(2)
<---------
ANAC58
<---------
ANAC46
<---------
bZIP60(2)
=========================================
bZIP_DOF
<---------
O2
--------->
bZIP60(1)
<---------
bZIP60(1)
--------->
O2
--------->
TGA1a
----------->
STF1
<-------
TEIL
<---------
ANAC58
--------->
ARR11(3)
<---------
TOE1(3)
<---------
ANAC58
-
--------->
DAG2
<---------
ANAC58
<--------
<---------
TOE2(3)
<------
NtERF2
<---------
ANAC58
--------->
WRKY38(1)
===============================
bZIP_DOF
<---------
ANAC58
--------->
WRKY45
---------->
DOF2
----------->
TGA1
<---------
ANAC46
--------->
WRKY12
--------->
AHL20(2)
----------->
HVH21
--------->
DAG2
----------
-----
MYC3
--------->
CCA1(2)
--------->
ALFIN1
---------->
DOF2
<----------
DOF2
---->
MYC3
--------->
YAB1
<---------
WOX13(1)
<---------
YAB1
<----------
DOF2
<-
cgttttaaataaagataaggttcttgaatgacgtggcgtttttatattagtattttgtgataaagcgtgtttacaaatgggccttaatgggctttgacca
7043600
--------->
TOE1(3)
<---------
ANAC55(1)
<---------
ANAC55(2)
<---------
ANAC58
<---------
ANAC58
<---------
ANAC46
<-----------------------
TaNAC69(2)
<----------------------
TaNAC69(1)
<-
--------->
MYB52(1)
--------------->
AGL15
<-
<---------
MYB52(2)
========================================================================
--------->
ANAC58
----------------->
AG
--------->
TOE2(3)
<-
--------->
ANAC55(2)
<-----------
GT1
--------------------->
WRI1
<-
<---------
ANAC55(2)
<---------
CCA1(1)
------>
ZmHOX2a(1)
-------
--------->
ANAC58
<---------
RVE1(1)
--------->
TOE2(3)
--------
-------->
WRKY18(1)
--------->
ANAC58
---------->
ID1
<----------
DOF2
---------
-
WRKY18(1)
--------->
ANAC58
<-----------
GT1
<---------
ANAC46
<-------------
->
HVH21
<---------
O2
<---------
ARR11(3)
<---------
ICU4
<---------
ANAC58
--------->
TOE2(3)
----------
HVH21
--------->
ANAC46
--------->
ICU4
<---------
ANAC58
--------------
tggtcaagtaacgtgaacaacacgatatttttccatttttgtaatttttcctcattcttagtttcgttttcaagggctcttttcttataccctaaaaagt
7043700
<----------
DOF2
<---------
TOE1(2)
------>
ZmHOX2a(1)
<---------
ANAC46
------>
ZmHOX2a(2)
<-------
TEIL
<------
ZmHOX2a(2)
--------->
ALFIN1
--------->
ARR14(2)
--------->
ZAT2
*
TSS
<---------
ARR14(2)
<---------
ZAT2
--------
ANAC58
------>
ZmHOX2a(2)
<---------
DEAR3(1)
--------
ANAC46
==============
HOX2a_HOX2a
<---------
ANAC58
==
MADS_MADS
===============
HOX2a_HOX2a
<---------
ANAC58
--------
ANAC58
<------
ZmHOX2a(2)
<------
NtERF2
--------
ANAC55(1)
--------->
ARR14(2)
--------->
ETT(1)
---->
GT1
<---------
ARR14(2)
<---------
ANAC46
->
DAG2
--------->
YAB1
--------->
LBD16
<-----------
HVH21
<--
->
DOF2
<------
ZmHOX2a(2)
--------->
LBD16
<---------
LBD16
<---------
bZIP60(1)
<--
--
AGL15
<---------
GLK1(1)
--------->
ARR14(2)
--------->
bZIP60(1)
----
->
AGL15
----------->
GT1
--------->
GLK1(1)
<---------
ARR14(2)
<-----------
RAV1(1)
<---
ta
cttgtagatcaaaatcgaaaatca
atgggaactccagaatcatcgagagagccatgtccggatcggatcctagatgatgtcggaggtgcgtttgcgat
7043800
<---------
ANAC58
<------
NtERF2
--------->
ATERF1(1)
<---------
ORA47(2)
<---------
RRTF1(1)
------>
NtERF2
<---------
ATERF1(1)
<---------
DEAR4(2)
=============================
HOX2a_HOX2a
<---------
RAP2.3(1)
<------
ZmHOX2a(2)
<---------
ERF1
--------->
ARR14(2)
--------->
DEAR3(1)
<---------
ARR14(2)
--------->
ATERF1(2)
<---------
MYB46(3)
--------->
ATERF1(1)
<------
MYB46(1)
<---------
ABI4(1)
<------
MYB83
<---------
At4g35610
--------->
WRKY18(1)
<---------
MYB46(3)
--------->
ZAT2
<---------
DEAR3(1)
--------->
MYB55(2)
<---------
ZAT2
<---------
RAP2.3(3)
<---------
AtMYB61
--------->
GLK1(1)
<---------
ANAC46
<---------
MYB46(3)
<------
NtERF2
--------->
LBD16
<---------
MYB52(1)
--------->
ATERF1(1)
<---------
ANAC58
<-------
GAMYB
--------->
LBD16
<---------
RAP2.3(1)
<-----------
RAV1(1)
<------
NtERF2
------>
NtERF2
<---------
MYB46(3)
------>
NtERF2
<---------
ATERF1(1)
<---------
At4g35610
<------
ZmHOX2a(1)
--------->
LBD16
<---------
DEAR3(1)
---
-------
ANAC58
<-----------
GT1
<---------
LBD16
<---------
LBD16
----
-------
ANAC58
<-----------
ARR10
----------------------->
TaNAC69(2)
------
----->
MYB55(2)
<---------
CCA1(2)
--------->
REM1(1)
<---------
CCA1(2)
<----------
DOF2
------
MYB46(3)
<---------
ARR14(1)
--------->
GLK1(2)
<---------
DEAR3(1)
<---------
RAP2.3(2)
<---------
KAN4(2)
gggtgctgttggtggatcagcgtatcacctcataagaggaatctacaactctcccggcggagctcgtctctccggcggcgttcaagctttgagaatgagc
7043900
<------
MYB46(1)
<------
MYB83
<---------
AtMYB61
--------->
ALFIN1
<---------
ANAC58
<---------
ANAC46
<---------
ANAC46
--------->
ALFIN1
<-----------
HVH21
--------->
ANAC58
--------->
ALFIN1
--------->
ANAC58
--------->
LBD16
<---------------
AtSPL3
<---------
ANAC46
<------
MYB83
<---------
ANAC58
<------
MYB46(1)
--------->
AtLEC2
--------->
HSFC1(2)
<---------
DEAR3(1)
<-------
TEIL
<---------
At4g35610
<---------
AtMYB61
<------
ZmHOX2a(2)
--------->
At4g35610
--------->
REM1(2)
<-------
GAMYB
--------->
ANAC58
--------->
ANAC46
---------->
DOF2
<---------
ANAC58
--------->
TOE2(3)
--------->
ANAC46
--------->
CCA1(2)
<------
NtERF2
<---------
HSFC1(2)
--------->
TOE1(3)
--------->
ANAC58
<---------
ARR11(3)
<---------
HSFB2a(2)
<---------
LBD16
--------->
TOE1(2)
--------->
ZAT18
--------->
ARR11(3)
--->
NtERF2
<---------
HSFB2a(1)
--------->
ANAC46
<---------
ANAC58
--------->
ARR14(2)
----->
ZAT18
<------
ZmHOX2a(1)
<---------
ANAC58
--------->
TOE2(2)
<---------
SPL7
<---------
ARR14(2)
--->
At4g35610
--------->
HSFB2a(1)
<----------
DOF2
<---------
ANAC58
---------->
DOF2
<-
gggccgagaagcggaggaagcttctccgtgtggggtggtctttactcaaccttcgattgtgcgttggtgtacgcaagacaaaaggaagatccatggaact
7044000
<---------
ARR14(2)
--------->
ARR14(2)
<---------
HSFB2a(1)
--------->
MYB46(3)
<-----------
HVH21
>>>>>>>>>>>>>>>>>
LFY
<---------
ANAC46
------>
NtERF2
<---------
ANAC58
<---------
At4g35610
<---------
ANAC58
<---------
MYB46(3)
<---------
ZAT18
<---------
MYB52(1)
--------->
ARR14(2)
<-----------
RAV1(1)
--------->
ZAT14
------>
ZmHOX2a(1)
<---------
ARR14(2)
--------->
ALFIN1
<-----------
RAV1(1)
<---------
GLK1(1)
--------->
At4g35610
<---------
ANAC46
==============================
HOX2a_HOX2a
<------
NtERF2
<---------
DEAR3(1)
----
------>
ZmHOX2a(2)
--------->
HSFB2a(1)
------>
NtERF2
------>
ZmHOX2a(2)
--------->
ALFIN1
====================================
HOX2a_HOX2a
<---------
ANAC58
<------
NtERF2
<----
--------
ARR11(3)
<------
ZmHOX2a(1)
<---------
ANAC58
<----------
DOF2
<-------
GAMYB
cgatcttatctggtgcagccactggaggattcctctcgttgcgtcaaggcttaggcgcgtctgctagatcggctttagtcggaggtgtgttgttggctat
7044100
--------->
At4g35610
<---------
At4g35610
<---------
ZAT2
<---------
YAB1
--------->
MYB52(1)
------->
TEIL
----------->
GT1
--------->
LBD16
--------->
AtLEC2
<------
MYB46(1)
<---------
ANAC46
<------
ZmHOX2a(2)
<--------
P
<---------
LBD16
--------->
ARR11(3)
<------
ZmHOX2a(1)
--------->
ZAT14
<---------
ARR11(3)
----->
YAB1
--------->
YAB1
<---------
ZAT14
<---------
ARR14(2)
<-----------
GT1
-----
YAB1
<------
MYB83
---------->
DOF2
<---------
ZAT18
<------
ZmHOX2a(1)
<----------
DOF2
<--
gatagaaggagttggtatcatgttaaacaaagttcagagtactgcgcataacgagcagttcatggaggatcatgcagctacttctttaccatatggtatg
7044200
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AGI:
At1g20340.1
Description:
DRT112 (DNA-damage-repair/toleration protein 112); copper ion binding / electron carrier. Identical to Plastocyanin major isoform, chloroplast precursor (DRT112) [Arabidopsis Thaliana] (GB:P42699;GB:Q9LN26); similar to plastocyanin [Arabidopsis thaliana] (TAIR:AT1G76100.1); similar to Plastocyanin, chloroplast precursor (GB:P00289); contains InterPro domain Blue (type 1) copper domain; (InterPro:IPR000923); contains InterPro domain Blue (type 1) copper subtype; (InterPro:IPR011572); contains InterPro domain Cupredoxin (InterPro:IPR008972); contains InterPro domain Plastocyanin; (InterPro:IPR002387); contains InterPro domain Blue (type 1) cop
Range:
from: 7042419
to: 7043353
Orientation: Reverse
Links:
TAIR
MIPS
AGI:
At1g20350.1
Description:
ATTIM17-1 (Arabidopsis thaliana translocase inner membrane subunit 17-1); P-P-bond-hydrolysis-driven protein transmembrane transporter. similar to ATTIM17-2 (Arabidopsis thaliana translocase inner membrane subunit 17-2), P-P-bond-hydrolysis-driven protein transmembrane transporter [Arabidopsis thaliana] (TAIR:AT2G37410.1); similar to ATTIM17-2 (Arabidopsis thaliana translocase inner membrane subunit 17-2), P-P-bond-hydrolysis-driven protein transmembrane transporter [Arabidopsis thaliana] (TAIR:AT2G37410.2); similar to protein translocase [Brassica rapa] (GB:ABL97987.1); contains InterPro domain Mitochondrial import inner membrane translocase
Range:
from: 7043703
to: 7044582
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.