Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                            <---------ANAC46                                                          <---------ANAC58                                                          <---------ANAC58                                                         <---------LBD16                                                      <---------ANAC58                                                      <---------ANAC58                                 ---------->DOF2  <---------ANAC58                     ------>ZmHOX2a(1)                            ------>ZmHOX2a(1)     <---------ANAC58          --------->ATHB12                           <---------LBD16     ------->PIF5                 --------->ATHB51                  <---------CCA1(2)            <-------PIF5                <---------YAB1 --DOF2 <---------ZAT18 <-----------GT1 --------->WRKY38(1)--------->LBD16 <---------AHL20(2)   gtagaactagtggtcttcttgtatattttcctggctaaagaattgaccacgagcttgtttgcgggtctcaaactgatattattggtctcctccaaggagg  6471400                                                                                    <------ZmHOX2a(1)                                                                                   <----------ID1                                                                                   ----------->GT1                                                                              <---------ICU4                                                                              <--------HAHB4                                                                              --------->ATHB12                                                                             --------->ICU4                                                                             <---------YAB1                                                                           <-----------------AGL1                                     --------->ARR14(2)                    <-----------------AG                                     <---------ARR14(2)                   <-------TEIL            <--                                --------->ANAC46                       <---------DEAR3(2)   ---------                             --------->ZAT14                          ===============================                       ------>ZmHOX2a(1) ------>ZmHOX2a(1)            ------>ZmHOX2a(2)     ---------   --------->MYB46(3)===========================HOX2a_HOX2a           =====================HOX2a_HOX2a --------->ARR14(2)  ------>ZmHOX2a(2)   ====================================HOX2a_HOX2a    ---------   ctcgaaccgcttcttcaatttgatcctcttcttcactcaaatcctcttcttcaatctcatactcttcttcgatcggttcatcattaggaaaaataagcaa  6471500                   --------->LBD16                  --------->LBD16    --------->ANAC58    --------->ANAC46                             <---------At5g28300    --------->ANAC58                   --------->LBD16                                  --------->ANAC58 ----ZmHOX2a(1)  <---------LBD16      <---------ANAC58                                  --------->ANAC58 >ANAC58         --------->LBD16      <---------ANAC58        ----------->GT1          --------->SPL7 ====HOX2a_HOX2a<---------LBD16       <---------ANAC46   ----------->RAV1(1)         <---------SPL7 >ANAC46  <---------ATHB12           <---------LBD16  ----------->RAV1(1)          --------------->AtSPL8 >ANAC58 <-----------ARR10   <-----------GT1 --------->MYB52(2)        --------->At4g35610        <--   ggacacaagcaaatcatcccccggagaatagtcacctcttgcgggattagttactgcaacaacatagaaaattagctcaaatatcgcagtaccccattcc  6471600                                                     <---------ANAC58                                                     <------MYB83                                                     <------MYB46(1)                                                     <---------ANAC46                                                     <---------ANAC58                                       ----------->GT1            <---------WOX13(1)                                      <---------TOE2(3)<---------ANAC46         <---------MYB52(1)         --------->ICU4  <---------AtMYB61         --------->DOF5.7(2)   --------->ANAC58     --------->MYB55(2)        --------->TOE2(3)      --------->ANAC58     --------->MYB46(2)               --------->GLK1(1)       ----------->GT1         --------->ANAC46     --------->MYB111(2)              <---------GLK1(1)      --------->ICU4       ------>ZmHOX2a(1)        <---------MYB46(3)             <------ZmHOX2a(1) --------->YAB1        --------->ARR14(2)           --------->MYB111(1)   --------------->AGL15 -------CCA1(2)        <---------ARR14(2)   --------->ICU4      --------->ATHB12 <---------TOE2(3)   atatcgtaatcgttaattagctctgaatcctccaagaaataatgtaatttttgtttggtgggaaactgattgttttcttcgttgaggaattcttcgataa  6471700                                                                                      --------->ARR11(3)                                                                                      <---------ARR11(3)                                                                                     --------->YAB1                                                                                    <---------YAB1                                                                                <---------ANAC46                                                                                <---------ANAC55(2)                                                                                <---------ANAC55(1)                                                                                --------->ANAC55(2)                              <---------ETT(2)                               <---------WOX13(1)                           ------->GAMYB                                   --------->ATHB12                          --------->MYB46(3)                               <---------ICU4                          <------------AtMYB77                            --------->ICU4                          --------->DEAR3(2)                   <----------DOF2  <---------ANAC58                        --------->ARR14(2)                 <------NtERF2  <---------YAB1                        <---------ARR14(2)                ------>NtERF2<---------MYB46(3)                    <---------ZAT6                   --------->ZAT18  <---------WOX13(1)    <--------    ------->TEIL--------->ZAT14                     --------->ALFIN1  <--------P<---------ANAC58   acgatgtatcagtaaatgtgtagtcgtaaccgtcgatatttgcattcactgagagtgtgccagcgttttctggttgatgattgcgtatgatattgtggta  6471800                  <---------WOX13(1)                 <------------CBF                --------->ATHB12                                                                  <--              <---------WOX13(1)                                                           <---------            --------->ATHB12                  --------->AHL20(1)                          <---------TOE2(3)            <---------ICU4                    --------->AHL20(2)                      <----------DOF2           <---------YAB1             ----------->GT1                                <---------ANAC58           --------->ICU4             <---------YAB1      --------->YAB1             <---------ANAC46 -TOE2(3)--------->YAB1    ---------->DOF2    <---------AHL20(2)                     <---------ANAC58   gaaatctattctcatgattgattgaagaaaaaagaagatgatgaaaaataaaataagaaatcaaaatgttgatggaatttgtgtctggcgtttatgttgt  6471900                                                                  <---------YAB1                                                                <---------AHL20(2)                                  <---------AHL20(1)           --------->AHL20(2)                     --------->GLK1(2)                         --------->ICU4                    --------->ARR14(2)                  ----------->RAV1(1)                    <---------ARR14(2)                <------NtERF2            <---------AHL20(2)    <---------AHL20(2) <---------DEAR3(2)       <---------MYB52(1)         --------->AHL20(2)--------->ETT(1)<---------AHL20(2)      --------->TOE2(3)        ------->TEIL         <---------DEAR3(1)                     <---------GLK1(1)     ----------->GT1<---------GLK1(2)              --------->RAP2.6(3)          <---------AHL20(2) ---------HVH21    <------ZmHOX2a(1)   <---------AHL20(2)  <---------ARR11(3)   --------->AHL20(2) --RAV1(1)<-----------TBP <---------AtLEC2         --------->ATERF1(1) <-----------GT1 <---------HSFB2a(2)   tgtcacaacgttatttatagaggattctgcatgcattttatttttttgatggggtcggcaacatatttattattttccatttttaaatactagaaatctg  6472000                           <---------MYB111(1)                           --------->MYB46(3)                     <---------YAB1                     <-----------GT1                  <---------YAB1                --------->YAB1               --------->ICU4               --------->AHL20(2)               <---------AHL20(2)               <---------ATHB51            <---------AHL20(2)                                                    --------->DAG2           <---------AHL20(2)                                               --------->LBD16           --------->AHL20(2)--------->MYB52(1)                            ----------->GT1       <---------AHL20(2)  <---------MYB52(2)                  <---------MYB46(3)--------->DAG2       --------->AHL20(2)  <---------MYB46(2)                <------------CBF   ---------->DOF2    <----------DOF2--------->YAB1                         ------------>CBF<---------LBD16 <-----------GT1<---------ICU4  ------->GAMYB     ----------->HVH21 ----------------->AGL1   atttaacttttaattaaataattatactaactaacggcgttactacgcttgtttgacacatacaattgttgacaaaaccggaaaaaggtgttttgcatcg  6472100                                    --------->ANAC46                                  <---------ALFIN1                            --------->REM1(1)                           <------NtERF2                          ------>NtERF2                          ----------->RAV1(1)                        --------->RAP2.3(1)                       ------>NtERF2--------->ANAC58                       <---------ATERF1(1)                       --------->LBD16                      --------->LBD16                      <---------DEAR3(1)                                                        <----                     <---------LBD16--------->ANAC58      <---------O2                          <----              ---------->DOF2  --------->ANAC46      ------>ZmHOX2a(2)                        <------         --------->ANAC58----------->HVH21         <---------ARR11(3)         <-----------RAV1(2)         ----------->GT1<------NtERF2              --------->ARR11(3)    --------->ANAC58   ---------         --------->ANAC58--------->DEAR3(1)     <---------WOX13(1)       --------->ANAC46  <---------YAB1       --------->MYB52(1)<---------ETT(2)     --------->ATHB12           --------->ANAC58--------->YAB1   gcaaatacaaaacggaaaaagaccccggcgacaacaccacgcactagttcattgatcttcacatggcaacttgaaacgacacaggggacaatcgtgattg  6472200                                                                          <---------AHL20(1)                                                                          <---------ARR11(3)                                                                          --------->ARR11(3)                                                                          --------->AHL20(1)                                                                     <---------YAB1     ----------------->AGL1                       <-----------GT1  --------->YAB1     <-----------------AGL1  ---------->DOF2  --------->AHL20(2)   ----------->GT1      <---------TOE1(3) --MYB46(1)               --------->TOE2(3)   <---------ARR11(3)  ----------->GT1       <---------TOE2(3) --MYB83              --------->YAB1          --------->AHL20(1)  <---------YAB1    --------->TOE2(3) ---WOX13(1)         <-------TEIL      <---------ETT(2)         --------->YAB1    <---------ARR11(3) >ATHB12      <------ZmHOX2a(1)       ---------->ARF1  ----------->GT1   --------->AHL20(2)   <------   gtctcaaaccagtttaggacacattcatcgtcaaagtcatgtctaccatatattacgacgttacaagaatgataaatatatcaatatgttaatgttttta  6472300  Previous    Next  AGI:  At1g18760.1    Description:  zinc finger (C3HC4-type RING finger) family protein. similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT3G13228.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN74950.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Ubiquitin interacting motif (InterPro:IPR003903); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 6471141    to: 6471815    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.