Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                      --------->ARR14(2)                                             <-----------HVH21                                           --------->ATERF1(1)                                           <------NtERF2                                          <---------DEAR3(2)                                         <---------DEAR3(1)                                        <---------ABI4(1)                                        <------NtERF2                                        <-------                                        --------->ATERF1(1)                               <---------LBD16                                       ------>NtERF2<---------ARR14(2)                 --------->KAN4(2)                                       <---------ATERF1(1)                            <---------HSFC1(2)                                       <---------ORA47(2)                             --------->HSFB2a(1)                                       <---------DEAR4(2)                             --------->KAN4(1)                                      --------->ATERF1(2)                             --------->HSFC1(2)                                      <---------RAP2.6(2)                             <---------KAN4(1)                                      <---------ATERF1(2)                             <---------HSFB2a(1)                                      <---------DEAR3(1)                        --------->ANAC58                                     --------->ATERF1(1)                        --------->ANAC46   --                                <---------ANAC58    <---------ARR11(3)          --------->O2---------           <---------MYB52(1)   <---------ANAC58   <---------CCA1(2)            --------->ANAC58-----          <-------GAMYB--------->YAB1<---------ORA47(1)             <---------ZAT6   <---------KAN4(2) -------->YAB1        <---------YAB1 <---------LBD16<-----------ARR10         <---------ALFIN1<------ ---------ICU4<---------YAB1 <----------DOF2--------->ALFIN1 <----------DOF2 --------->DEAR3(1) -----   catcatcaagtccgttatagtagtatcatacctttcttggccggcggtgtcccatatctgagcctttatagtcttatcgcccacgcgaacattccggtaa  6266500                                                                                       --------->ATERF1(1)                                                                                      <---------ATERF1(1)                                                                                    --------->ATERF1(1)                                                                                    <------NtERF2                                                                                  <---------ANAC46                                                                                  <---------DEAR3(1)                                                                                 <------NtERF2                                                                                 <---------LBD16                                                                                 --------->ATERF1(1)                  <---------DEAR3(2)                                            ------>NtERF2    <---                  <---------MYB46(3)                                            <---------ATERF1(1)                  <------MYB46(1)                                               <---------RAP2.3(1) --MYB52(1)       <------MYB83                            ---------->DOF2      <---------RAP2.3(3)  - -------->DOF2   <---------DEAR3(1)                 --------->GLK1(2)          <---------ATERF1(2)  - >LBD16         <---------ORA47(1)        <---------CCA1(2)                    --------->ATERF1(2)<-- ---->ANAC58  <---------MYB46(3) ------->GAMYB  --------->HSFB2a(2)            <---------DEAR3(1)---- --P         <---------AtMYB61   --------->ANAC46  --------->ARR14(2)         --------->SPL7------>ZmHOX2a(1) ---->ANAC58<---------MYB52(1)--------->MYB52(1)<---------HSFB2a(2)         ----------->HVH21  ------   gcaaagtctactccgatggtcggtttagagtctaaccgaaactcatctctcgagaacctcgaaaggaggtttgattttccgacggcggagtctcctatca  6266600                                            --------->LBD16                                            ------>NtERF2                                           --------->ANAC58                                           --------->DEAR3(1)                                           --------->ANAC46                                           --------->ANAC58                                          <---------LBD16                        <---------YAB1                                         ------>ZmHOX2a(1)                      <---------AHL20(1)  ------>NtERF2                  <---------TOE2(2)                              <---------AHL20(2) --------->DEAR3(1)              <---------TOE1(2)                              --------->AHL20(2) --------->DREB2C(2)             --------->SPL7                                 --------->AHL20(1) <---------ALFIN1              <---------SPL7                               <---------CCA1(1) ------At4g35610              --------->TOE1(1)                             <---------RVE1(1) -------->DEAR4(2)            --------->TOE2(1)                            <---------AHL20(1) -------->ORA47(2)           --------------->AtSPL8                        --------->AHL20(1) -------ALFIN1               <---------------AtSPL3                        <---------ARR11(3)      -- ----->At4g35610             --------------->AtSPL3                        --------->ARR11(3)  ------ --->YAB1           <---------ALFIN1 --------->ARR14(2)                  ----------->ARR10     ------   gcaccgccttgaataggtagtcgcactcttcgtcgtacgattcctccgccatgctctatggtgttcaagtttgataagatattatattagtaaatcgaag  6266700                                            ---------->DOF2                                           <------ZmHOX2a(1)                                 --------->ARR14(2)                                 <---------ARR14(2)                             =====================HOX2a_HOX2a                             ------>ZmHOX2a(2)                 =================================HOX2a_HOX2a               ---------->DOF2 -------->DOF2   <------ZmHOX2a(2)   --------->LBD16                       <------ZmHOX2a(1) --->ANAC58    =====================HOX2a_HOX2a                         <---------LBD16         <---- --->ANAC58    <------ZmHOX2a(1)<---------GLK1(1)                 ------->TEIL        --------->ZAT6   caaaaggaagttgagaaggatcaatggatgatcgaaatccgaagaggaaagggtttgttttatgtaagaacctctcaggaaagtctttccactaagtata  6266800                                                               --------->ARR11(3)                                                               <---------ARR11(3)                                                             --------->ANAC58                      --------->YAB1                    <---------ETT(1)         <---------AHL20(2)                             <----------ID1                             <-         --------->ATHB12     <---------YAB1         <---------WOX13(1)                            <-        --------->AHL20(2)  -------->HAHB4         --------->ATHB12                                <-     --------------->AGL15  <---------ICU4        <---------YAB1--------->CCA1(2)              <-----    ----------------->AGL3 --------->ICU4       <---------At4g35610       --------->AHL20(2)<--------    ================================================================================================= -----ARR14(2)       ----------->GT1        <-----------HVH21--------->ANAC58   <---------YAB1 <-----   tatggctccatttattgaaaacatggataattatgcatataactaatgtcatatgattgcgacaagatatatgaaatgaattagtattgttttttttctt  6266900                                                                                               ------        ----------->GT1                                                                       <------       ----------->GT1                                                                       -------- --------ANAC58                                                                              <------- --------ANAC46                                                                              <------- --------ANAC58               *TSS      --------->DAG2                                       <------- ----------AGL15             <---------YAB1                                       --------->YAB1 ---GT1<---------ZAT6     <---------AHL20(2)        <---------AHL20(2)           ----------->GT1 ==========MADS_MADS     --------->AHL20(2)   ----------->GT1               <------ZmHOX2a(1)<------- -----DOF2         <------ZmHOX2a(1)  ---------->DOF2                   --------->ZAT2---------->DOF2   ttcttggaagagttaaaatgaggacgatataatttttgagaaaaggtatagtatataatatagaaaatgaaacgagcaggacaaggataaaagaggcgtg  6267000    --------------->AtSPL8    <---------------AtSPL8              ----------->GT1   <------------CBF       <---------RVE1(1)                                          ----------->HVH21 ----->HVH21              <---------CCA1(1)                                  <---------YAB1 -----HVH21              --------->ARR11(3)                                 <---------AHL20(2) ->O2                    <---------ARR11(3)                                 --------->AHL20(2) --ANAC46                <---------AHL20(1)                                --------->YAB1 --ANAC58          ------>MYB83     --------->ARR11(3)                     --------->AHL20(2)       - --ANAC58          ------>MYB46(1)  --------->AHL20(1)             <---------WRKY12<---------ZAT6   - --O2         <-----------GT1       <---------AHL20(1)             <---------WRKY38(1)       <-------   acagagattgtacataataccatccaagatatttgttatatattgtatatagtctgtatttctattttgtcaacgaattaaaatagtgtgacctcttatc  6267100                                                                                     ------>ZmHOX2a(2)                                                                                    --------->GLK1(1)                                                                                    <------ZmHOX2a(2)                                                                                   --------->ARR14(2)                                                                                   <---------ARR11(3)                                                                          ===============HOX2a_HOX2a                                                                          ------>ZmHOX2a(2)                                                                         <------ZmHOX2a(2)                                                                         ================HOX2a_HOX2a                                                                        <---------ARR14(2)                                                                        <---------AGP1                                                                        --------->ARR11(3)                                                                        --------->AGP1                                                                        --------->ARR14(2)                                                                        <---------ARR11(3)      -----                                                                       <---------CCA1(2)        -----                                                                     --------->HSFB2a(2)    <--------      <----------DOF2                                           <---------WOX13(1) --------->ARR11(3) -------->TOE2(3)          <-----------------AG                >>>>>>>>>ARR2       <---------AGP1 -------->YAB1        <---------YAB1<------ZmHOX2a(1)         --------->ATHB12     <---------ARR14(2) --CCA1(2)<-----------GT1  <-----------------AGL1            <---------YAB1       <------ZmHOX2a(1)   tatcttaacttttgacttcttgttatgtttctagcttaggaaaaaataagaagttgtgatgttttgattgtctagatcttattaggatctcaagcgtcaa  6267200                                                                                               <-----                                                                                               <-----                                                                                               <-----                <---------AtLEC2                                                       <------MYB83              <---------YAB1                                                           <------MYB46(1)           <---------ATHB12                                                           --------->MYB59   --------->DAG2                                              ------>MYB83           <---------AtMYB61  ---------->DOF2------->TEIL                                  ------>MYB46(1)      <---------MYB52(1) ---->ANAC58  --------->AtLEC2        ------->TEIL           <---------MYB59   --------->MYB52(1) ---->ANAC58--------->YAB1 --------->ZAT14                <-----------GT1      ------------>AtMYB77 - ---HVH21--------->WOX13(1)<---------ZAT14         <-----------GT1 <-----------GT1 <-------GAMYB ----   gtcataaagctcaatcatgcatgtttctctgtagtctctgtacgtttgagttttgacattttaccaaattcactcactgactcacggttaggttttgact  6267300                                                           ----------->GT1 ----ANAC58                                 <---------ARR14(2) ----ANAC58                                 --------->ARR14(2) ----ANAC46                                 <---------GLK1(2)         --------->AHL20(2) --------->DOF2                <---------DAG2             --------->DAG2                   <---------At4g35610 ------->GT1                   <----------DOF2           ---------->DOF2    --------->TOE2(3)      --   tgtaaagagttggctacttgggcctaagatgggctttatcaggtcggatttttcacaaaaaaagtcaaaaaaaaaaattcttaaaaatgggtgagcaaat  6267400  Previous    Next  AGI:  At1g18200.1    Description:  AtRABA6b (Arabidopsis Rab GTPase homolog A6b); GTP binding. similar to AtRABA6a (Arabidopsis Rab GTPase homolog A6a), GTP binding [Arabidopsis thaliana] (TAIR:AT1G73640.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68179.1); contains InterPro domain Ran GTPase; (InterPro:IPR002041); contains InterPro domain Rab11-related (InterPro:IPR015595); contains InterPro domain Ras GTPase; (InterPro:IPR001806); contains InterPro domain Ras (InterPro:IPR013753); contains InterPro domain Small GTP-binding protein; (InterPro:IPR005225); contains InterPro domain Ras small GTPase, Rab type; (InterPro:IPR003579); contains InterPro domain Ras Range:  from: 6265409    to: 6266930    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.