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AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                                                                 ---
                                                                                                <---
                                                                                             <------
                                                                                             <------
                                                                                             -------
                                                                                             <------
                                                                                           =========
                                                                                           ---------
                                                                                           <------ZmHOX2a(2)
                                                                                          --------->AGP1
                                                                                          <---------ARR11(3)
                                                                                          --------->ARR11(3)
                                                                                          <---------ARR14(2)
                                                                                     ===============
                                   <---------DOF5.7(2)                               --------->CCA1(2)
                           <---------ANAC46                                          ===============
                           <---------ANAC58                                          <------ZmHOX2a(2)
                           <---------ANAC58                          --------->GLK1(2)    --------->ARR14(2)
                     <---------ARR11(3)                     --------->ZAT2          <---------ARR14(2)
                     <---------GLK1(2)  <---------GLK1(2)   --------->At4g35610     --------->AGP1 <
                     --------->ARR11(3) --------->ARR14(2)  <---------ZAT2          --------->ARR14(2)
                 ---------->DOF2   --------->MYB52(1)       <---------At4g35610     --------->ARR11(3)
            <--------P--------->GLK1(2) <---------ARR14(2)------->GAMYB            --------->GLK1(1)
 
ccatgagaagaattggtagataaagattcttcgtgtgttaacggattcgcgagtttcacaacgagctgagcgattccatgagactgagatccagatccag  5763700
     --------->ANAC58                                                          <------NtERF2
     --------->ANAC58                                                         ------>NtERF2
   <---------PCF2                                                 <---------LBD16
--------->ALFIN1                                      <------NtERF2          <---------ANAC46
------>ALFIN1                                        <---------ATERF1(1)--------->MYB52(1)
---ZmHOX2a(1)                                       <---------DEAR3(1)  <---------DOF5.7(2)
-----RAV1(2)                ---------->DOF2         ---------->CDC5    <---------WRKY12
---LBD16               <------ZmHOX2a(1)         --------->At4g35610   <---------WRKY38(1)
-->HSFB2a(2)         --------->ANAC46            <---------ZAT2 --------->ARR14(2)
---HSFB2a(2)   --------->ANAC46                  <---------At4g35610--------->LBD16
======HOX2a_HOX2a   <-----------RAV1(2)          --------->ZAT2 <---------ARR14(2)
>CCA1(2)       --------->ANAC58          --------->YAB1 ------>NtERF2 ----------->HVH21
======HOX2a_HOX2a ------->TEIL--------->DAG2 <----------CDC5    --------->GLK1(2)
===HOX2a_HOX2a --------->ANAC58         <---------ATHB12<---------ZAT18<---------ZAT14           ---
------ZmHOX2a(1)  ----------->RAV1(1) --------->WOX13(1)--------->ZAT18--------->ZAT14 <---------GLK1(2)
 
gaggagggacccaataagacgcaccaggaacaaaagggagccaatcaggctgagctcggcgcacaaaaatccggtgaacggcgtcttctagcttctgtat  5763800
                                                            <------ZmHOX2a(2)
                                                       ------>NtERF2
                                                      ----------->HVH21
                                                      --------->LBD16
                                                      --------->DEAR3(1)
                                                      --------->ANAC46
                                                     --------->HSFB2a(2)
                                                 ------>ZmHOX2a(2)
                                                <------ZmHOX2a(2)
                                                <---------GLK1(1)
             <-------GAMYB                      --------->GLK1(1)
          <------NtERF2     <---------AtMYB61  <---------ARR14(2)
         ------>NtERF2     <------NtERF2       <---------AGP1
        <---------DEAR3(1)--------->LBD16      --------->ARR14(3)
       --------->SPL7    <------NtERF2         --------->AGP1
     ----------->HVH21   <----------CDC5       --------->ARR11(3)
    ------>ZmHOX2a(2)   --------->At4g35610    --------->ARR14(2)          =========================
    --------->DEAR3(2)  ------>NtERF2   --------->TOE2(1)  --------->ARR14(2)
   <------ZmHOX2a(2)    --------->LBD16 --------->TOE1(1)  <---------ARR14(2)
  --------->ARR14(2)    <---------LBD16<---------------AtSPL8------>ZmHOX2a(2)            --------->ALFIN1
  <---------ARR14(2)   --------->DEAR3(1)      <-----------ARR10           ------>ZmHOX2a(2)--------
 <------ZmHOX2a(1)    --------->ATERF1(1)      <---------ARR11(3)         <------ZmHOX2a(2)<-------TEIL
------->DOF2<---------MYB46(3)     --------->WOX13(1)<---------HSFB2a(2)  ==========================
 
taaaggatccgacggcgattgagaagccgcggaggtatcaatctcgtacagatctccccgacgatcggaagattgagatcggaatgaaacaaggtgcgac  5763900
                           --------->ARR14(2)
                           <---------ARR14(2)
                           --------->MYB52(1)
                       <------NtERF2
                       --------->RAP2.3(1)
                      <---------ORA47(2)
                      <---------RAP2.3(1)
                      <---------DEAR4(2)
                      <---------ATERF1(1)
                     --------->ATERF1(2)
                     <---------RAP2.3(3)
                     <---------RAP2.3(2)
                     <---------DEAR3(1)
                     <---------ANAC46
                     --------->DEAR3(1)
                    ------>NtERF2
                    <------NtERF2                                                            -------
                    --------->RAP2.3(1)                                                 --------->LBD16
                    --------->ATERF1(1)                                               <-------------
                    <---------ABI4(1)                                                <------ZmHOX2a(2)
                   <---------ATERF1(1)                                              --------->ARR14(2)
                   <---------DEAR4(2)                                               <---------ARR14(2)
                   <---------RAP2.3(1)                                             =================
                  <---------DEAR3(1)                                               <------ZmHOX2a(1)
                 <---------LBD16                                                  <---------HSFB2a(1)
                <---------bZIP60(2)                                          --------->HSFB2a(2)
                <---------O2                                                 <---------HSFC1(1)
             ----------->HVH21                                  ==========================HOX2a_HOX2a
             ----------->TGA1                                   <------ZmHOX2a(2) --------->HSFB2a(1)
    <------ZmHOX2a(1)<---------ATERF1(2)                   ---------->DOF2   <---------HSFB2a(2)
===========HOX2a_HOX2a------>NtERF2           --------->DAG2   <---------ARR11(3) --------->HSFC1(2)
--->HVH21  <------ZmHOX2a(1)      <----------DOF2 --------->ZAT18       --------->ICU4------>ZmHOX2a(2)
===========HOX2a_HOX2a<---------ERF1         ---------->DOF2   --------->ARR11(3) <---------HSFC1(2)
 
gaagggaggagagaggatgacgcggcggcgaaacggcctttggatagagaaagtgaacgagagaaagatcgagccattatctagaaggatccgaagaaaa  5764000
              ------>ZmHOX2a(2)
             <------ZmHOX2a(2)
            --------->ARR14(2)
     ----------->HVH21
     --------->DEAR3(1)                                                                      -------
    --------->At4g35610                                                               <----------DOF2
--------->GLK1(2)                                                *TSS                <---------DAG2<
--->DOF2    <---------ARR14(2)       --------->ICU4        <---------ANAC46       <---------ALFIN1 -
----------TaNAC69(2)             --------->At5g28300       --------->ALFIN1    <-----------GT1    --
====================HOX2a_HOX2a ----------->GT1          <---------ANAC46     <-----------GT1-------
 
gagaatcagcgacgagatcggtttctgtttcaacgctgtaattttgagttttggataatgctgtgtgagacagagcttatttttcccacctttttatcgt  5764100
                                                  <----------DOF2
                                                  <---------DAG2
                                               <-----------GT1
                                             <---------AHL20(2)
                                      <---------AHL20(2)
                                     --------->ICU4
                                  --------->AHL20(2)
                                 --------->ARR11(3)         ------>NtERF2
                                 <---------ARR11(3)        --------->RAP2.6(2)
                                 <---------AHL20(1)        --------->DEAR3(1)
                            ----------->TBP<---------YAB1  ------->GAMYB
-->YAB1  <---------ANAC58  ------>MYB83 <---------YAB1    --------->DEAR3(2)
---------AHL20(2)     <-----------GT1--------->AHL20(2)  --------->At4g35610
-------->AHL20(2) <---------YAB1 --------->AHL20(1)      <---------At4g35610
------->ICU4    ----------->GT1 --------->YAB1<-----------GT1  <---------MYB59
---->GT1 <---------ANAC58  ------>MYB46(1)<---------AHL20(2)<---------RAP2.6(3)    <----------DOF2
 
aattttttgtttgcttattttgttattacctacaaaaatatttattattttaactttttcagccgacttaactaaattagctctgtcttttttagtacta  5764200
            --------->ATHB12                                         ----------------->AGL3
          <---------GLK1(2)                                   <---------ARR14(2)
       --------->ANAC58                                       --------->ARR14(2)
       --------->ANAC46                                    <---------ANAC46         --------->AHL20(2)
       --------->ANAC58                                    <---------ANAC58         <---------AHL20(2)
      <---------LBD16                                ------>ZmHOX2a(1)<---------------AGL15
    XXXXXXXXXXXXXXXXXXXX>MIR867                      <---------STY1(1)--------------->AGL15
    --------->MYB46(3)  <-----------GT1         <---------CCA1(2)    <-----------------AGL3 ------->TEIL
<---------KAN4(2) <------ZmHOX2a(1)        <----------DOF2 <---------ANAC58        --------->AHL20(2)
 
tcgaataaccacggattattaggaagtttactacccatggtttagacttttatatcctaggggcgtattcaatctaattttagaaaattaatatgaattt  5764300
                                        ----------->GT1
                                   ---------->DOF2               <-----------GT1
                          <---------ARR11(3)              <-----------GT1
                 <---------YAB1  ----------------->AGL1<---------ICU4
       --------->ZAT6     --------->ARR11(3)        --------->YAB1
 
tgtaagtgtaacacaatttgatgaatgaagataatttccaaagtagaaaaatgaataaaaatcacattttacatatatgtgtctgataactaattcaatc  5764400
                                                                                   -------->ATHB1
                                                                                   --------->ATHB51
                                                                                   --------->ATHB12
                                                                                   --------->YAB1
                                                                                   <---------ICU4
                                                                                  <---------YAB1
                                                                                  <---------ATHB12
                                                                        <---------ANAC55(2)
                                                                    <-----------TGA1
         ----------->GT1                                            <-----------HVH21
        --------->DAG2                                             --------->ANAC46<--------ATHB1
       ---------->DOF2                                             --------->DEAR3(1)
   ----------->RAV1(1)                        ---------->DOF2    <---------At5g28300
  <---------ETT(1)                      <---------YAB1    <---------WOX13(1) --------->YAB1
 --------->DEAR3(2)      --------->GLK1(2)  ------>ZmHOX2a(2)  --------->MYB46(3) --------->ICU4
<---------At5g28300 ---------->DOF2   --------->YAB1   <---------YAB1   --------->ANAC55(2)
 
ttttaccgacaaaagtgaaactcgaaagtatctatcttctaacatgatcgaaagtaatctaattgaatcaccgtcacatatcacaatcattggtttttta  5764500
                        <----------DOF2
                <-----------GT1         <---------CCA1(1)                   ----------->GT1
             <---------AHL20(2)         <---------RVE1(1)     --------->KAN4(2)                   <-
             <---------ICU4            <---------ARR11(3)   <------ZmHOX2a(2)                 <-----
         --------->AHL20(2)   --------->At4g35610          <---------ARR11(3)                 <-----
         <---------AHL20(2)   <---------At4g35610<------ZmHOX2a(2)  <----------DOF2          <------
    <---------ZAT6     <---------DAG2  --------->ARR11(3)  --------->ARR11(3)                -------
 
agtcttagtgatataaatatttccagccttttctgctaaatagatattttggatcagaaatagatcattctctttttttttgtaaattcgaaaatagata  5764600
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AGI:  At1g16840.1   
Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G78890.1); similar to hypothetical protein OsI_027317 [Oryza sativa (indica cultivar-group)] (GB:EAZ06085.1)
Range:  from: 5762687    to: 5764066    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.