Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100         <---------ALFIN1      --------->ARR14(2)    --------->LBD16   --------->RAP2.6(2)  <---------LBD16 ---------ARR14(2) -------->ARR14(2) ------->ATERF1(1)        <---------At4g35610 -------SPL7              <---------ZAT2 ----->DEAR3(1)           --------->ZAT2            <--------P --NtERF2           ------>NtERF2         <-------GAMYB                                    <---------HSFB2a(2) >NtERF2           ----------->HVH21     <---------ANAC58                              <---------ANAC58 ---DEAR3(1)       --------->DEAR3(1)    <---------ANAC46                              <---------ANAC58 -->DEAR3(1)       <---------ETT(1)      <---------ANAC58                              <---------ANAC46 ->ATERF1(1)  <-----------HVH21      <---------ANAC58                                --------->ARR11(3) -ATERF1(1)----------->RAV1(2)       <---------ANAC58                     ----------->ARR10--------->HSFB2a(2) ->HVH21 <---------ALFIN1 --------->At4g35610----------->HVH21     --------->MYB52(1)<---------ARR11(3)   cgtagccggacacacctgtctccgaccgagcagacttaagcttgcgttggacaggtagcccgaagagactaccggtgagaaactcaatgtcttggagaag  5345800                                                                                <---------MYB46(3)                                                                        <---------SPL7                                                                       <---------ANAC58                                                                       <---------ANAC58                                                                <--------P      <------MYB46(1)                                                          --------->ARR14(2)    <------MYB83              <---------MYB46(3)                          <---------ARR14(2)--------->LBD16            --------->LBD16                            ----------------->AGL1  <---------AtMYB61           <---------ANAC46                           <-----------------AG<---------LBD16           --------->DEAR3(1)                        <---------WRKY18(1)<-----------HVH21        --------->ANAC58                         <-------TEIL <------MYB83--------->SPL7        --------->ANAC58          --------->ANAC58  ----------->HVH21  <---------ANAC46        --------->ANAC46          --------->ANAC58<---------AtLEC2--------->MYB52(2)  ---------->DOF2      --------->CCA1(2)        --------->AtLEC2<---------MYB52(1) ---------->DOF2    <---------TOE2(3)    <---------ARR11(3)   <------MYB46(1)  --------->ALFIN1   tcccaaaggcacgccgtggtttgagatttggaaggcaccccaagttctacatgcatgaccgatttggttagtcgcgtccgggtggtcgaggtcgatgaga  5345900                                                            --------->PCF2              --------->LBD16                                               <---------ARR14(2)                      --------->LBD16                                               --------->ARR11(3)                      --------->HSFB2a(2)                                               <---------ARR11(3)                     <---------LBD16                      =================================HOX2a_HOX2a                   --------->MYB52(1)                      ==================================HOX2a_HOX2a               <---------ZAT2                   <------NtERF2               --------->ARR14(2)                 <---------At4g35610                  --------->LBD16             <---------GLK1(1)                   --------->HSFC1(2)                  <------NtERF2    --------->LBD16          <---------PCF5        <---------HSFC1(2)                <---------LBD16   <---------ANAC46          <---------TCP20       --------->At4g35610                <---------ANAC46 --------->At4g35610        <---------TCP16(1)    <---------GLK1(1)               <------NtERF2<------ZmHOX2a(1) --------->GLK1(1)<---------ALFIN1   --------->ZAT2              <---------MYB46(3) <---------At4g35610        <---------TCP11(2)    --------->GLK1(1)              ------>NtERF2 ===========================HOX2a_HOX2a             <---------MYB52(1)             ----------->HVH21   <---------LBD16<------ZmHOX2a(2)           <---------LBD16             --------->ALFIN1  --------->ATERF1(1)   <----------DOF2      <---------ARR14(2)            <---------MYB52(1)--------->At4g35610------>ZmHOX2a(2)        --------->ARR14(2)            <-----------HVH21 --------->ZAT2 ----------->ARR10--------->ZAT18 --------->LBD16         <---------LBD16    ============================HOX2a_HOX2a       --------->GLK1(2)         <       <-----------GT1<------ZmHOX2a(1)     <------ZmHOX2a(1) <---------ZAT18<---------LBD16        -   gggatgttttcaccggtggccggaggagaaggagcagcggagaagaggagatcgtctttaggggtccacttgtaagaatccgggagctcccggagagatg  5346000                        <------MYB46(1)                        <---------At4g35610                 --------->ALFIN1      <---------MYB52(1)--------->At4g35610    --------->MYB59     ----------->GT1   <-----------RAV1(2)  <------MYB83                             --------->ANAC58 --------->AHL20(2) ---------bZIP60(1)    <---------DEAR3(1)                        --------->ANAC58 <---------AHL20(2) -------->bZIP60(1)--------->ALFIN1                      <---------YAB1      <----------DOF2        -   tgaagtcaggtatgtgagagtgtgggaggtgaatgggatggcctctaaacacatctgttaacatagcaggcatcttgctcttttttaattagttttaaaa  5346100                                                    <------MYB83                                                    <------MYB46(1)                                                   <---------MYB46(3)                                               <---------ANAC46                                             <---------ANAC46                                      <-                                            <---------AtMYB61                                   -----                                            --------->ALFIN1                                    <----                                           <---------ZAT14     <------------CBF               <------           <---------WOX13(1)             --------->ALFIN1   *TSS                            --------        <---------YAB1             <---------YAB1  --------->MYB46(2)                        <------- ---------->GT1    <XXXXXXXXXXXXXXXXXXXXXMIR2936<---------MYB46(3)     <---------ZAT6 <-----------TBP   ctttgtaaatttgatagatgtttgtgttttttttcttatgagaagtgtggtgtttggtgatgggagattggaagagttagagagttttatttatagtggt  5346200                                                            <---------MYB46(3)                                                         <------------CBF                                                        --------->ATHB12                                                        --------->ATHB51                                                       <---------AHL20(2) --------ANAC46                                        <---------YAB1 ---->ALFIN1                                          <---------AHL20(1) -----ANAC46                                          --------->AHL20(2) ---MYB46(3)        ---------->DOF2                   --------->YAB1 ->ALFIN1        <------NtERF2<<<<<<<<<MYB98 <---------AtMYB61  --------->KAN4(2)      <-----------GT1 --AtMYB61    <------ZmHOX2a(1) ---------->DOF2  ------------>CBF           --------->ATHB12      ---   ggagtagagaccaagaggaggcaaaagcatatgttaaagcacttgttttggtccaatattattggttattctacttgtttattggattaatacaatacga  5346300                               --------->LBD16                               ------>NtERF2                  --------->AHL20(2)                              --------->ANAC58                <---------YAB1           --------->HSFC1(1)<---------LBD16                  <---------AHL20(2)           <---------HSFB2a(2)--------->ANAC58               --------->AHL20(2)           --------->HSFB2a(2)--------->ANAC46               <---------AHL20(1)     ------>MYB46(1)        <---------ATERF1(1)              --------->AHL20(1)     ------>MYB83          --------->PCF2               <---------AHL20(2)                   <-------TEIL   <---------MYB59         --------->PCF5               --------->AHL20(2)             --------->CCA1(2)   --------->AtMYB61      <-----------HVH21         --------->AHL20(2)          <---------YAB1   <--- ------>MYB46(3)  <---------YAB1           <----------DOF2  --------->YAB1<---------AHL20(2)---------   acaaaccaaacctctagaaaattatagaggtcccgccatttccttcttttgtaagaaaataaatataatttcttatttgattatgcaagataagatacat  5346400                                                                                        ------->TEIL                                                                                        <---------ARR14(2)                                                                                        --------->ARR14(2)        <---------ANAC58                                                                <---------ARR11(1)        <---------ANAC58                                                                <-----------ARR10   --------->ATHB12                           ----------->GT1                          <---------ARR14(1)  ----------->HVH21                       <---------TOE1(3)                            <---------CCA1(2) ----TEIL                                 <---------TOE2(3)                       <-----------GT1 >CCA1(2)                           <---------TOE2(3) ----------->GT1        ----------->GT1   acacatgatgggttgtcaaactatgtataattcaaattgaagttgaggtagtaatatggtatattgtgttcatatgtagaagttaaaccgtatctatcca  5346500                                                                                                  ---                                              <----------ID1                                      <--                    <---------TOE2(3)     ---------->DOF2                                         <--                 --------->AHL20(2)<---------ANAC58   --------->ANAC55(2)                         ---              <---------AHL20(2)   <---------ANAC58  <---------ICU4                --------->AHL20(2)             --------->AHL20(2)    <---------ANAC46  --------->YAB1                <---------AHL20(2)     <---------AHL20(2)            <---------ANAC55(2)<---------ANAC55(2) <----------ID1          ---    <---------AHL20(1)       <---------YAB1--------->DAG2             ---------->DOF2            ----    --------->AHL20(1)  ----------->GT1  <---------AHL20(2)       ---------->DOF2  --------->AHL20(1)    --------->AHL20(2)---------->DOF2 <---------ARR14(2)      ---------->DOF2     --------->AHL20(2)   ttacaatataatctataaatttaagaaagtgattaatgcgtatataaagggacaataagtattcaaaagaaagaaagagacaaaaaaaattgtagtctaa  5346600                                                                         --------->ATHB51                                                                         <--------ATHB1                                                                         --------->ATHB12                                                                         -------->ATHB1                                                                         <---------ICU4                                                                         --------->YAB1 ------>ATHB51                  ------>ZmHOX2a(1)                       --------->ICU4 -------AHL20(2)      ----------->GT1               <---------CCA1(2)   <---------ATHB51 -------ICU4          <------MYB83              <---------TOE2(3)       <---------ATHB12 ------>AHL20(2)      <------MYB46(1)--------->ATHB12    ----------->RAV1(1)  <---------YAB1 ------>ATHB12   --------->ATHB12   <---------ATHB12--------->GLK1(1)   <---------YAB1              - ----->ICU4 <---------TOE2(3)  --------->TOE2(3)<---------ANAC55(2)  ------------>ATHB5 ---------->DOF2   ttatttgttttgtttatgttgatttggttatttcctcagtcattggaattaagtatatccaacatttttcttcaattattgtcatactaaaaaagaagtc  5346700  Previous    Next  AGI:  At1g15550.1    Description:  GA4 (GA REQUIRING 4); gibberellin 3-beta-dioxygenase. Identical to Gibberellin 3-beta-dioxygenase 1 (GA4) [Arabidopsis Thaliana] (GB:Q39103); similar to GA4H (gibberellin 3 beta-hydroxylase), gibberellin 3-beta-dioxygenase [Arabidopsis thaliana] (TAIR:AT1G80340.1); similar to gibberellin 3-beta hydroxylase [Prunus subhirtella] (GB:BAD91162.1); contains InterPro domain 2OG-Fe(II) oxygenase (InterPro:IPR005123); contains InterPro domain Isopenicillin N synthase; (InterPro:IPR002283) Range:  from: 5344473    to: 5346161    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.