Search
Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
Go to graphical and table display
1 10 20 30 40 50 60 70 80 90 100
------>
ZmHOX2a(2)
--------->
ARR11(3)
<---------
AGP1
<---------
ARR11(3)
<---------
ARR14(2)
--------->
ARR14(2)
<---------
CCA1(2)
<---------
HSFB2a(2)
--------->
HSFB2a(2)
<---------
TOE1(3)
-------
ANAC58
<---------
ALFIN1
<-----------
HVH21
-------
ANAC58
<---------
ICU4
<----------
DOF2
----->
HSFC1(2)
--------->
YAB1
<---------
ARR14(2)
------
HSFC1(2)
<------
ZmHOX2a(2)
--------->
ARR14(2)
<----
-----
TOE1(2)
<-----------
GT1
<---------
ARR11(3)
--------->
HSFB2a(2)
<---------
ALFIN1
<--
--
HVH21
<----------
DOF2
--------->
ARR11(3)
<---------
LBD16
<---------
AHL20(2)
<----
gcttctggatctttataacctctgagcaaacatccaagatcatcat
cttcacaccttcggaaactctttcaggtattatatcgaacaccttgtgatcact
5168200
------>
MYB83
*
TSS
------------>
CBF
------>
MYB46(1)
--------->
ANAC58
--------->
MYB52(1)
--------->
ANAC58
<
<---------
MYB46(2)
--------->
ANAC46
---------
<---------
MYB59
--------->
HSFC1(2)
<--------
<---------------
AGL15
<---------
HSFC1(2)
<------------
CBF
<---------
DAG2
<-
===============================================================================================
MADS_MADS
------
DOF2
----------->
HVH21
<---------
At4g35610
<-----------------
AGL3
<
---------
GT1
<---------
ANAC46
--------->
ANAC55(2)
<----------
DOF2
<----------
DOF2
------
-----
DAG2
----------->
TGA1
--------->
At4g35610
<------------
CBF
<------------
CBF
<--------
ttaccaaacagagatgacgagtagaagaagcatctcac
gaaatttgcaattgacaaattgtaaacgctttgtattgtccaactttttatgggcctatctg
5168300
<-------
TEIL
<----------
DOF2
--------->
AHL20(2)
<-----------
GT1
--------->
YAB1
<-----------------
AGL1
--------->
AHL20(2)
---------->
ID1
<---------
AHL20(2)
---------
DAG2
<----------
DOF2
----------->
RAV1(1)
<-----------
GT1
>
ARR14(2)
--------->
YAB1
<---------
AHL20(2)
--------->
AHL20(1)
---
ARR10
--------->
AHL20(2)
<----------
DOF2
--------->
AHL20(2)
--------
DAG2
<---------
ATHB12
<-----------------
AGL1
<---------
AHL20(2)
----------
DOF2
------------>
CBF
--------->
AHL20(2)
<---------
AHL20(1)
----->
HVH21
------>
NtERF2
<---------
ARR11(3)
--------->
AHL20(2)
<---------
TOE2(3)
-
ARR14(2)
--------->
RAP2.6(3)
--------->
ARR11(3)
--------->
YAB1
--------->
AHL20(2)
--------->
At4g35610
acctttttctcttttcggcccaataaaacttttagattttatttcttttggcaacaataaatttaaaataatatacattatggaaaatcatctacaaaca
5168400
--------->
AHL20(2)
--------->
ANAC58
<---------
AHL20(2)
--------->
ANAC58
--------->
AHL20(2)
<--------
P
--------->
ANAC58
--------->
AHL20(2)
<------
MYB83
--------->
ANAC58
--------->
AHL20(2)
<----------
DOF2
<------
MYB46(1)
<-----------
GT1
--------->
TOE1(3)
<---------
TOE2(3)
--------->
ANAC58
<---------
YAB1
<--------
--------->
TOE2(3)
--------->
MYB59
--------->
ANAC58
<---------
YAB1
<---------
AHL20(2)
aaaacctttaaattaaaaaactcacatgttaatgcaattaggttagtaagcaagcacgtcttgacaaaaatgttattgttacacatttaaaaattcacat
5168500
<------
NtERF2
--------->
ATERF1(1)
--------->
TGA2(2)
<---------
ATERF1(1)
<-----------
HVH21
<-----------
TGA1
--------->
YAB1
--------->
AHL20(2)
<---------
ANAC58
--------->
ANAC58
<---------
AHL20(2)
<---------
ANAC58
--------->
ANAC58
--------->
AHL20(2)
<----------
DOF2
--------->
ANAC55(2)
<---------
AHL20(2)
------>
ZmHOX2a(2)
--------->
ANAC55(1)
--------->
AHL20(2)
<------
ZmHOX2a(2)
<--------
--------->
ANAC58
<---------
ICU4
<---------
ARR11(3)
*
TSS
--------->
ANAC46
--------->
YAB1
--------->
ARR14(2)
--------->
WOX13(1)
--------->
ANAC58
--------->
ICU4
<---------
ATHB51
--------->
ARR11(3)
------------
<-----------
GT1
--------->
ANAC46
<---------
ATHB12
<---------
ARR14(2)
------------>
CBF
---
GT1
<---------
TOE2(3)
--------->
ICU4
---------->
DOF2
---------->
DOF2
<----
gttatacaagacaaaacataaacgtaatgttttgcagtcaaataatgaaataaatgaaataatacaaagggatctttatgtaaaggcgtc
accaattagt
5168600
<---------
HSFB2a(2)
<---------
LBD16
--------->
MYB46(3)
<------
NtERF2
<---------
MYB52(1)
<---------
MYB52(1)
<-------
GAMYB
------>
NtERF2
<---------
ALFIN1
--------->
ATERF1(1)
<---------
ALFIN1
<--
--------->
ZAT14
------>
NtERF2
--------->
DEAR3(1)
<--
--------->
MYB52(1)
<---------
ATERF1(1)
<---------
MYB55(2)
---
<---------
ATHB51
<---------
ZAT14
<---------
ALFIN1
--------->
MYB46(3)
<---
--------->
ICU4
<---------
ZAT18
------>
ZmHOX2a(1)
<---------
At4g35610
-----
-
ATHB12
--------->
ANAC58
<----------
DOF2
--------->
DEAR3(1)
--------->
At4g35610
-------
--->
AGL15
--------->
ANAC58
<---------
ANAC58
--------->
ANAC46
--------->
ANAC46
--------->
LBD16
-----
ZAT6
--------->
ANAC46
<---------
ANAC58
------>
ZmHOX2a(1)
------>
ZmHOX2a(1)
--------->
HSFB2a(2)
ggaaata
atggagcaagccactacactcttcatattgctttccactctcctcctcgccgtctccgttgagtctcctcagccaccgctatttcccgatgaa
5168700
<---------
ALFIN1
<---------
ALFIN1
--------->
LBD16
--------->
ANAC46
--------->
LBD16
--------->
AtMYB61
<---------
LBD16
<---------
ZAT2
------->
GAMYB
------>
MYB46(1)
--------->
LBD16
<---------
ALFIN1
<-----------------
AGL3
--------->
LBD16
<---------
MYB55(2)
-------
ARR11(3)
------>
MYB83
--------->
ANAC58
--------->
MYB46(3)
---------
ARR10
--------->
MYB52(1)
--------->
ANAC46
------>
MYB46(1)
------>
ARR11(3)
--------->
AtMYB61
<---------
LBD16
-------->
P
---
------
At4g35610
-------->
P
--------->
ANAC46
--------->
DEAR3(1)
<
-->
TEIL
<---------
ARR14(2)
--------->
ANAC58
---------->
DOF2
---
--->
DOF2
--------->
ARR14(2)
<---------
LBD16
--------->
ANAC46
------>
MYB83
-----
gctctccccactaaatctggctacctcccggttaaacccgcacccggctcgtccatgttctatgccttctacgaagcccaagagccaaccacacctcttc
5168800
----
------
<------------
ATHB5
-------
--------->
ATHB12
-------
<---------
ICU4
---------
--------->
YAB1
---------
--------->
At4g35610
-------->
ATHB1
---------
<---------
At4g35610
<--------
ATHB1
<---------
ZAT14
<---------
ZAT18
<---------
YAB1
<---------
ANAC58
----
--------->
ANAC46
<---------
At4g35610
<---------
ANAC55(1)
<---------
ALFIN1
<---------
PCF2
<---------
ATHB51
<---------
ANAC46
<---
--------->
ZAT6
--------->
ALFIN1
<---------
ATHB12
--------->
ZAT2
--------->
REM1(2)
-
--->
ZmHOX2a(1)
<---------
ZAT2
--------->
ICU4
<-----------
GT1
<---------
ANAC58
<----
<<<<<<
GRF7
------>
ZmHOX2a(1)
----------->
TCP11(1)
<---------
WOX13(1)
<-----------
HVH21
<----------
-------->
HVH21
--------->
ZAT2
------------>
ATHB5
<---------
ZAT2
--------->
ALFIN1
<-
------>
RAV1(2)
<---------
MYB52(1)
<-----------
RAV1(2)
<----------
DOF2
----------->
RAV1(2)
-------
ctgacactccgctcctcgtttggctccaaggtgggccaggctgctcttcaatgattggcaacttttacgagctcggtccctggcgtgtagtttcacgcgc
5168900
--------->
DEAR3(2)
--------->
HSFB2a(1)
<---------
HSFC1(2)
--------->
ANAC58
------>
NtERF2
------->
RAV1(1)
--------->
RAP2.3(1)
>
NtERF2
<------
NtERF2
-->
ANAC58
<---------
ATERF1(1)
-->
ANAC46
------>
NtERF2
>
ANAC58
--------->
LBD16
>
ANAC58
--------->
ANAC46
>
ANAC46
-------->
P
--------->
ANAC58
----->
DEAR3(1)
<---------
LBD16
<---------
DAG2
------
ALFIN1
<---------
ALFIN1
--------->
HSFC1(2)
-------->
DEAR3(1)
<---------
DEAR3(1)
--------------->
AGL15
------>
NtERF2
--
NtERF2
--------->
DEAR3(1)
<---------------
AGL15
<---------
At4g35610
--
-
GT1
--------->
ANAC58
--------->
ARR14(2)
<----------
DOF2
--------->
ARR14(2)
--
--------
ALFIN1
------->
GAMYB
<---------
HSFB2a(1)
<---------
GLK1(1)
<---------
ARR14(2)
--
-->
ANAC58
--------->
ANAC58
<---------
ARR14(2)
<-----------------
AGL3
<------
ZmHOX2a(1)
--------->
DEAR3(1)
cacagacctcgagcgcaaccccggcgcatggaaccgtctattcggactactttttgtggataacccaataggagtcggattcagcatcgcagcctcacaa
5169000
------>
MYB83
-------->
P
------>
MYB46(1)
--------->
MYB52(1)
--------->
MYB55(1)
--------->
At4g35610
----------->
HVH21
------>
NtERF2
<---------
ANAC46
--------->
DEAR3(1)
<----------
DOF2
<---------
ANAC58
--------->
DEAR3(2)
--------->
GLK1(2)
<---------
GLK1(1)
--------->
HSFB2a(2)
<----------
CDC5
<---------
At4g35610
--------->
HSFC1(2)
--------->
At4g35610
--------->
GLK1(1)
<---------
ZAT2
--------->
ANAC46
<---------
At4g35610
<---------
O2
<---------
HSFC1(2)
------->
ANAC58
<---------
DEAR3(1)
--------->
DEAR3(1)
--------->
ANAC58
------->
ANAC58
<-----------
HVH21
--------->
ANAC46
<---------
ANAC58
--------->
ZAT2
-
------->
ANAC46
--------->
O2
<---------
ICU4
<---------
ANAC46
--------->
ANAC58
<
caagacatacccacaaatcagagacaggtcgctgagcatctttacgccgctctcgtggagttccttgaacaaaacccaagcttcgaaaaccgaccggttt
5169100
Previous
Next
AGI:
At1g14990.1
Description:
similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAB92466.1)
Range:
from: 5167142
to: 5168238
Orientation: Reverse
Links:
TAIR
MIPS
AGI:
At1g15000.1
Description:
SCPL50 (serine carboxypeptidase-like 50); serine carboxypeptidase. Identical to Serine carboxypeptidase-like 50 precursor (SCPL50) [Arabidopsis Thaliana] (GB:Q9M9Q6); similar to SCPL48 (serine carboxypeptidase-like 48), serine carboxypeptidase [Arabidopsis thaliana] (TAIR:AT3G45010.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42277.1); contains InterPro domain Peptidase S10, serine carboxypeptidase; (InterPro:IPR001563)
Range:
from: 5168591
to: 5170061
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.