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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<--------
<-------
GAMYB
--------->
MYB52(2)
-------->
HAHB4
--------->
ATHB51
<---------
ICU4
<--------
ATHB1
--------->
AHL20(2)
--------->
AHL20(2)
--------->
ICU4
----------->
GT1
<---------
AHL20(2)
<---------
ATHB51
<------
MYB83
--------->
YAB1
<---------
YAB1
----------->
GT1
<---------
YAB1
<---------
AHL20(2)
<------
MYB46(1)
<----------
DOF2
<---------
WRKY12
--------->
AHL20(2)
--------->
MYB59
<-----------
GT1
<-------
TEIL
<----------
DOF2
<---------
AHL20(1)
ctattttttgtttggttaatgtgttatattttgactttctaattatatgttcgtcaactattcctttcaaactaatcgcacaaaataattgttcgttata
4978600
--------------->
AtSPL3
<---------
KAN4(2)
------>
ZmHOX2a(2)
--------->
YAB1
<------
ZmHOX2a(2)
--------->
YAB1
--------->
CCA1(2)
<---------
YAB1
<---------
ATHB12
--------->
ARR14(2)
--------->
YAB1
--------->
ICU4
<---------
TOE2(3)
<---------
ARR14(2)
<---------
YAB1
<---------
TOE2(3)
<---------
TOE1(3)
--------->
AGP1
--------->
YAB1
--------->
YAB1
<----------
DOF2
<---------
At4g35610
<--------
HAHB4
---------->
DOF2
--------->
YAB1
--------->
HSFB2a(2)
-
MYB52(1)
<---------
YAB1
<-----------
GT1
<---------
ICU4
<-----------
GT1
--------->
MYB59
ttcttcagatccgaacttcaacctgtattattataagaataaactatttaagcgcttactaatgatgttcttgtttttcttctcaaacttttaggttatc
4978700
<---------
AHL20(2)
--------->
AHL20(2)
<---------
AHL20(1)
--------->
AHL20(1)
--------->
AHL20(2)
<
<---------
AHL20(2)
<-
--------->
AHL20(2)
--
---------->
DOF2
<---------
AHL20(1)
--
>>>>>>>>>>
WRKY38
--------->
AHL20(2)
<-
>>>>>>>>>>
WRKY26
<---------
AHL20(2)
--------->
TOE2(2)
>>>>>>>>>>
WRKY43
----------->
RAV1(1)
--------->
ARR14(2)
<----
--------->
WRKY12
--------->
At4g35610
--------->
AHL20(2)
--------->
STY1(2)
--------->
WRKY38(1)
<---------
At4g35610
<---------
AHL20(2)
<---------
At4g35610
<---------
YAB1
>>>>>>>>>>>>
WRKY18
<-----------
HVH21
<---------
AHL20(2)
<---------
GLK1(2)
<-------
tgtttttataagttaacaatttgacaattgaccaaaatacaaagtcagagcccaacaattaatttattttaatccaaatattctctag
ctaacatatgat
4978800
--------->
AHL20(2)
<---------
AHL20(1)
--------->
YAB1
--------->
TOE1(3)
------>
ZmHOX2a(2)
------>
MYB46(1)
------
ZmHOX2a(2)
-------->
P
--------->
LBD16
--------
ARR11(3)
------>
MYB83
<---------
ANAC46
<---------
AHL20(2)
------->
ARR11(3)
<---------
At5g28300
--------->
LBD16
--------->
AHL20(2)
------->
AGP1
--------->
AHL20(2)
--------->
DEAR3(1)
------->
TEIL
--------
AGP1
<---------
AHL20(2)
------>
NtERF2
--------->
ANAC58
----------
-----
WOX13(1)
<-----------
GT1
<---------
ALFIN1
--------->
ANAC58
--------->
STY1(1)
--
YAB1
<---------
AHL20(2)
--------->
TOE2(3)
----------->
GT1
------->
TEIL
<---------
STY1(1)
agatctaacatattttaaattacagtctccaaccttgaacagcgacaccgcgtgaaaactctcatgcacgtatattatataaacccctagggtttgtaac
4978900
------
------
<-----
-------
--------->
ANAC58
--------->
ANAC46
--------->
ANAC58
--------->
SPL7
--------->
TOE2(2)
<---------
SPL7
<---------
ANAC55(2)
--------->
ANAC55(2)
<---------
AHL20(2)
<---------
ANAC58
--------->
AHL20(2)
--------->
AHL20(2)
--------------->
AtSPL3
<---------
ATHB51
----------->
GT1
--------------->
AtSPL8
<---------
ATHB12
---------->
DOF2
<---------------
AtSPL3
--------->
TOE2(3)
--------------->
AGL15
<---------------
AtSPL8
------------>
CBF
<---------
ICU4
----------->
GT1
<-----------
GT1
<--
--------->
TOE2(3)
--------->
AHL20(2)
---------->
DOF2
<---------
YAB1
--------->
TOE1(2)
->
GT1
--------->
WOX13(1)
--------->
ICU4
<---------------
AGL15
<-----------
GT1
<---------
ANAC58
at
tcaacatcaatctcaaataattcatcaacgagaaaagattaattcttactaccaaaagaaagaagataaattactattttgttttacgtacgaaatat
4979000
--------->
TGA2(2)
<-----------
HVH21
<-----------
TGA1
--------->
ANAC55(1)
--------->
ANAC55(2)
--------->
ANAC46
--------->
bZIP60(2)
--------->
ANAC58
------>
ZmHOX2a(2)
--------->
ANAC58
--------->
CCA1(2)
==============================
<------
ZmHOX2a(2)
<---------
O2
<---------
ARR11(3)
--------->
O2
<-----------
HVH21
--------->
AGP1
<---------
ICU4
--------->
TGA1a
--------->
YAB1
<---------
ARR14(2)
<---------
TOE2(3)
<---------
TGA1a
--------->
ANAC58
--------->
ARR11(3)
<---------
GLK1(2)
--------->
YAB1
<---------
bZIP60(1)
--------->
ARR14(2)
<---------
ARR11(3)
-------->
HAHB4
--------->
bZIP60(1)
--->
ARR11(3)
--------->
ARR11(3)
--------->
ICU4
<---------
ANAC55(2)
--->
AHL20(1)
<---------
RVE1(1)
<---------
ATHB12
<-----------
STF1
--------->
AtLEC2
----
ARR11(3)
----------->
ARR10
<---------
YAB1
<---------
ALFIN1
--------->
ANAC58
-->
AHL20(2)
<---------
ARR14(2)
<---------
TOE1(3)
----------------------->
TaNAC69(2)
<-----
---------
GT1
----------->
TBP
--------->
ZAT6
<---------
TOE2(3)
------>
ZmHOX2a(1)
--------->
WOX13(1)
ataccaagtgagatctacaaat
atggagagattttcactaaggtttgtgctaatgatggtgagcatcatcctcacgtcatcgatttgtcaagcacaactt
4979100
<---------
MYB52(1)
===============================================
MYC_MYB
============================
MYC_MYB
<-------
GAMYB
------>
ZmHOX2a(1)
<------
ZmHOX2a(2)
--------->
ARR11(3)
<---------
GLK1(2)
<---------
ARR14(2)
--------->
ARR14(2)
<---------
ARR11(3)
<------
--------->
AGP1
<-------
----------->
ARR10
--------->
O2
<---------
ANAC46
===============
HOX2a_HOX2a
<---------
O2
--------->
YAB1
<------
ZmHOX2a(2)
--------->
TGA1a
--------->
bZIP60(2)
<---------
ATHB12
--------->
ARR11(3)
--------->
MYB46(3)
--------->
TGA1a
----------->
RAV1(1)
--------->
ETT(1)
<---------
ARR11(3)
--------->
RAP2.6(3)
------>
NtERF2
=====
bZIP_DOF
--------->
WOX13(1)
================================================
bZIP_DOF
<------
NtERF2
-----
DOF2
<------
ZmHOX2a(2)
<----------
DOF2
------>
ZmHOX2a(2)
<---------
TGA1a
<---------
RAP2.6(2)
tctccaacattctacgatcaatcgtgtcggaatgctctttcgaagatcagatcctccgttagaacggccatcgctcgtgagagaagaatggccgcgtctc
4979200
-----
--------
---------
<--------
<---------
ICU4
--------->
YAB1
------->
TEIL
<--------
HAHB4
--------->
ANAC58
--------->
ATHB12
--------->
ANAC58
<---------
ATHB12
--------->
LBD16
--------->
WOX13(1)
<---------
LBD16
--------->
TOE1(3)
-----
-----
ARR10
--------->
TOE2(3)
<-----
--
CCA1(2)
----------->
HVH21
<---------
YAB1
<---------
ICU4
<-----------
GT1
--------->
AHL20(2)
taatccgcatgcacttccatgactgttttgttcat
gtaagtttttattcttctaaatactaattccacatttttaaaaaaccttacccaatcatttaata
4979300
<------
NtERF2
<---------
ANAC58
<---------
bZIP60(2)
<---------
ANAC58
<---------
ANAC46
<---------
TGA1a
---->
YAB1
<---------
O2
->
YAB1
<---------
ANAC46
>
AHL20(2)
----------->
HVH21
-
AHL20(2)
----------->
TGA1
<-------
TEIL
--->
HAHB4
--------->
ALFIN1
<---------
ANAC58
<---------
ZAT14
----
YAB1
------->
TEIL
<-----------
HVH21
<---------
ANAC58
--------->
ZAT18
<--------
atagttttgtgtatgtttag
gggtgtgacgcgtcgatattgctcgagggaacatcaacgatagagagtgaacgagatgcattgccaaacttcaaatcagt
4979400
<---
----
-----
--------->
YAB1
-------
<---------
ANAC58
<---------
RAP2.6(2)
<------
NtERF2
<---------
YAB1
<------
NtERF2
--------->
LBD16
------>
NtERF2
--------->
GLK1(1)
--------->
ANAC58
--------->
ARR14(2)
--------->
LBD16
<---------
bZIP60(1)
----------
<---------
ARR14(2)
--------->
ANAC46
--------->
bZIP60(1)
--------->
ANAC58
<----------
ID1
--------->
LBD16
<---------
At4g35610
<---------
ANAC46
--------->
DAG2
<---------
LBD16
<---------
ANAC46
<---------
LBD16
---------->
DOF2
---------->
DOF2
<---------
ANAC58
<-------
GAMYB
-----
-
ATHB12
>>>>>>>>>
GATA-1
<---------
HSFB2a(2)
<---------
ANAC46
<---------
MYB46(3)
-
aagaggttttgaagtcatagataaagccaaatccgaagtcgagaaagtttgtcccggcattgtttcttgcgctgatatcatagcggttgcggcaagagac
4979500
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AGI:
At1g14549.1
Description:
unknown protein
Range:
from: 4978789
to: 4978902
Orientation: Reverse
Links:
TAIR
MIPS
AGI:
At1g14550.1
Description:
anionic peroxidase, putative. Identical to Peroxidase 5 precursor (PER5) [Arabidopsis Thaliana] (GB:Q9M9Q9;GB:Q9MA28); similar to anionic peroxidase, putative [Arabidopsis thaliana] (TAIR:AT1G14540.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO46723.1); contains InterPro domain Plant peroxidase; (InterPro:IPR000823); contains InterPro domain Haem peroxidase; (InterPro:IPR010255); contains InterPro domain Haem peroxidase, plant/fungal/bacterial; (InterPro:IPR002016)
Range:
from: 4979023
to: 4980319
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.