Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                --------->MYB52(1)                           --------->ANAC58                                     --------->GLK1(2)                           --------->ANAC55(2)                                 <---------ARR14(2)                           --------->ANAC58                                    <---------GLK1(2)                       <-----------HVH21  <---------At4g35610               --------->HSFB2a(2)                      <---------ANAC46   <---------TOE1(3)            <---------ARR11(3)                  --------->At4g35610    <---------TOE2(3)      <---------TOE1(2)                  --------->ZAT2   ------->TEIL                <---------MYB52(1)      ----------->GT1                  <---------At4g35610<----------DOF2          <-------GAMYB <---------HSFB2a(2)   --------->MYB52(1)<-------TEIL------->GAMYB               <---------ANAC58  --------->ARR14(2) --------ID1      <---------ZAT2<---------MYB52(2)           <---------ANAC58--------->LBD16 -->DOF2   <---------YAB1  <---------ANAC55(2)         ------>ZmHOX2a(1)    --------->HSFC1(1)      < --DOF5.7(2)--------->ATHB12<---------MYB52(2)         --------->ICU4 --------->ARR11(3)  --------->YAB1   gagccaaacggtgttcattgagctgcgtcaagtaacgaactttaagcttattgtgtcctgatttcgttggattatcttccagaatcgctctgtaataaga  3846800                                                              --------->At4g35610                                                           ----------->RAV1(2)                                                           <---------At4g35610                                                       <---------ARR11(3)                        ----             <<<<<<<<<TBF1                             --------->ARR11(3)                       -----      --------->ZAT6                      <----------DOF2  --------->At4g35610                  <----    <-----------GT1                  ---------->ID1  ------->TEIL                               <---- ----------DOF2                  <----------DOF2  <---------ATHB12<---------ALFIN1    --------->YAB1   cccttttaactcttcttcttcagaaaaaacttctactttgtcgtcttttctaatgaatatcatctgctccatctcaaaaacccttgaatgaaaactaata  3846900                                                                                                  ---                                                                      --------->ICU4              ---                     --------->TOE2(3)                                <---------YAB1             ----      <---------ICU4 --------->TOE1(3)                        --------->TOE2(3)    <------ZmHOX2a(1) ----->RAP2.6(3)    --------->ZAT6            <---------At4g35610   --------->CCA1(2)           ----- ---->MYB52(1)     -------->P                 --------->At4g35610  --------->ARR11(1)   <----------DOF2 -------GT1    <---------At4g35610      <----------DOF2 --------->LBD16   --------->AHL20(2)    ----- -----ICU4     --------->At4g35610---------->DOF2      --------->ANAC46  <---------YAB1 <---------DAG2   acggctcatttttgctctgctaaccctaaatctaaaaaaagacttttctgctgaaacccgaaaaccatagatatgattatatgaaggagactttttgcaa  3847000                                                     --------->LBD16                                                    <---------LBD16                                                   <---------LBD16                                            --------->CCA1(2)                                           --------->ARR14(2) ---->GAMYB                              --------->ANAC58                                 <----------DOF2 ------>AtMYB61                          --------->ANAC58                              <-----------GT1 ----->MYB46(3)                          --------->ANAC46                    <----------DOF2   <----- ---->ANAC58                           <-----------GT1  ---------->DOF2   <-----------GT1 <---------DAG2 ---->ANAC58                    --------->ETT(2)--------->ANAC46     <----------DOF2   <---------AHL20(2)   ccaaaacacagtgctactgtgtctgtgcttagtgtcgatattcacgatacacatcggggaaagtgtgttttctttttttctttcccaatttacttttctt  3847100                                                                                                 ----                                                                                             --------                                                                                             <-------                                                                                             --------                                                                                  <---------ANAC46                  <---------YAB1                                                  <---------ANAC58                --------->YAB1                                                    <---------ANAC58<--                <---------ICU4                                                 --------->ALFIN1------               --------->ICU4         --------->ICU4                      --------->MYB52(1) <-------         <----------DOF2   --------->ATHB12                           --------->AHL20(2)    <------ZmHOX2a(1)        <-------GAMYB     --------->ICU4                              <---------AHL20(2)  <---------TOE1(2) -----DOF2     <---------ATHB51  <---------TOE2(3)               <---------MYB59 <------NtERF2<------ZmHOX2a(2)   tttttttggcgcttgaaattatgagaaaatgatttaagaaattatcaggcccaaactatctaatgggcctaattaaaaacggtgtcgtttcataggatcc  3847200                         <---------ARR11(3)                        <---------CCA1(2)          --------->ANAC58          ----------->GT1--------->ARR11(3)          --------->ANAC58        <-----------RAV1(2)   --------->ANAC46    <---------AHL20(1) -->ZmHOX2a(1)         <---------ARR11(3) ->ARR11(3)            --------->AHL20(1) --ARR11(3)         --------->AHL20(2) ->ARR14(2)   --------->ANAC58 -------ICU4  --------->ANAC58                                                       --------->MYB46(3) >ZmHOX2a(2)  ----------->GT1<---------CCA1(2)                           <---------ANAC58          -- --ARR14(2) <--------P --------->ARR11(3)  *TSS                          <---------ANAC58    <<<<<<<<   tcatcacgaagcaggtaagtaaaaatatatcttatcttctccaaaactctctcttcgatttcagcaattgcaatggcttccttcacaacaacttcttctt  3847300                                  <---------At4g35610                                  --------->O2                                  <---------ZAT2                                  --------->At4g35610                                  ----------->RAV1(2)                                 ------>NtERF2                             --------->ANAC46                                                   -----                             --------->ANAC58                   <---------LBD16                <-----                             --------->ANAC58                 <---------ARR14(2)               ------                            --------->SPL7                    --------->ARR14(2)               ------                           <---------MYB52(1)                <---------GLK1(1)                <------                          --------->LBD16                    --------->GLK1(1)             --------->At4g35610                         --------->ANAC46          <---------ALFIN1          <-------TEIL  <---------ZAT2                        --------->LBD16           <---------ZAT14       <------NtERF2      --------->ZAT2 ---->ZmHOX2a(1)        <---------LBD16           --------->ZAT14 --------->LBD16          <---------At4g35610 <TBF1   ------>ZmHOX2a(1)<-----------HVH21       <---------REM1(2)   <---------DEAR3(1)------>ZmHOX2a(1)   cctcgcttctcctcaaaactcttctccccgtaagccacctgaatcgtttctctacactctctggtatccgcgttggcgattcatggactcctctgctccg  3847400                        <------NtERF2                   <---------ARR14(2)                       ------>NtERF2                    --------->ARR11(1)          ----------->RAV1(2)               --------->TOE1(2)        --------->MYB46(3)                 --------->ZAT2      <---------ALFIN1 <-----------HVH21   <---------At4g35610 --------->ARR11(3)   <---------DEAR3(1)   --------->At4g35610 <---------ARR11(3)   --------->DEAR3(1)   <---------ZAT2                                    <------- ---->LBD16           <---------ANAC46  ---------->DOF2 --------->ARR14(2)                 --------->YAB1 ----HSFB2a(2)       <------NtERF2<-------GAMYB       <---------MYB46(3)                  <---------ATHB12 --->HSFB2a(2)     <---------DEAR3(1) <---------YAB1--------->At5g28300                   --------->ICU4 --->ANAC46<---------MYB52(1)   <---------ANAC46  <---------DEAR3(1)                 --------->YAB1 ---LBD16--------->DEAR3(1)  --------->ALFIN1  ----------->HVH21          --------->MYB52(1) --------   gaacatctccaccgctgggtctcggcgtcgagtggcgattgtgaaagctgcgacggtggattcggattactcgtcgaaacggagcaatagcaatgagcag  3847500                                                                       ------>NtERF2                                 --------->ATHB12                     --------->DEAR3(1)                                 <---------ICU4                  --------->CCA1(2)                                 --------->YAB1                  <------ZmHOX2a(2)                                 --------->ATHB51               --------->AGP1                  <----                                 -------->ATHB1                 --------->ARR14(2)         <---------WOX13(1)                                 <------------ATHB5             <---------ARR14(2)       --------->ATHB12                                 <--------ATHB1                 <---------ARR11(3)      <---------YAB1                                <---------ATHB12                --------->ARR11(3)    <---------At4g35610                       <---------ANAC46                     ---------->DOF2           --------->At4g35610          <---------YAB1        <---------YAB1             =============HOX2a_HOX2a <-----------RAV1(2) --At4g35610        <--------P  --------->ICU4             ------>ZmHOX2a(1)       <------ZmHOX2a(2)- ->At4g35610     ------>ZmHOX2a(1)                         ===============================HOX2a_HOX2a   agagagacgattatgcttcctggttgcgattacaatcattggctcattgtaatggagtttcctaaagatccagcgccaagtagggatcagatgattgata  3847600                                  --------->MYB52(2)                                 <-------TEIL                              <---------HSFB2a(1)                                                   <                              --------->HSFB2a(1)                                               <----       --------->ZAT6         --------->HSFC1(2)                                                <----  --------->TOE2(3)           <------MYB46(1)                                                 <------  --------->TOE1(3)           <---------HSFC1(2)     <---------GLK1(2)                 --------->ANAC46 -----ICU4                    <------MYB83 <----------DOF2                             --------->ANAC58 ------->P                   <---------TOE1(2) <---------YAB1   <---------MYB46(3)     --------->ANAC58   cttaccttaacactcttgctactgttcttggcaggttcgttttcgctttcttattgattctcttcgttgttgaattagttaactaatagacgacatttac  3847700  Previous    Next  AGI:  At1g11420.1    Description:  agenet domain-containing protein. similar to agenet domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G47230.1); similar to Agenet domain containing protein [Brassica oleracea] (GB:ABD65016.1); contains InterPro domain Tudor-like, plant (InterPro:IPR014002); contains InterPro domain Protein of unknown function DUF724 (InterPro:IPR007930); contains InterPro domain Agenet; (InterPro:IPR008395) Range:  from: 3844581    to: 3846872    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g11430.1    Description:  plastid developmental protein DAG, putative. similar to plastid developmental protein DAG, putative [Arabidopsis thaliana] (TAIR:AT3G06790.2); similar to plastid developmental protein DAG, putative [Arabidopsis thaliana] (TAIR:AT3G06790.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39088.1) Range:  from: 3847243    to: 3849162    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.