Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                            ---------->DOF2                                                                                   --------->KAN4(1)         --------->ANAC58                                                          --------->MYB46(3)         --------->ANAC58                 <---------At4g35610      <----------DOF2 <---------KAN4(1)  --------->ANAC58                   --------->At4g35610          <---------ANAC58 --------->HSFB2a(1)  --------->ANAC58                   <---------At4g35610 ---------->DOF2----------------->AGL1 ------>YAB1                         <-------GAMYB---------->DOF2 <---------ANAC58 <---------HSFB2a(1) ----GLK1(1)             <----------ID1   --------->At4g35610 <----------DOF2     <---------KAN4(2)   tcacaagtatcaagcatcgaactcaaaacaacaaattgcagttgagcttcacaaaagaagaaagctttgcttttgcctattgggaacaatccaaaagtcc  3615800                                                                --------------------->WRI1                                                                <----------DOF2                                                         <---------GLK1(1)                                     <---------ICU4      --------->GLK1(1)                                     --------->YAB1     <---------ARR11(3)            --------->YAB1            --------->AHL20(2)      <---------YAB1  ---------->DOF2      --------->GLK1(2)         --------->YAB1      --------->ATHB12   --------->GLK1(2)       <---------GLK1(2)     -------      --------->YAB1   <----------DOF2--------->ARR11(3)--------->ARR11(3)           <---------YAB1   cgtttcaataaacataaaatacttcctttcttcatttgatgatcacgaagaatctaaagaactcccctttctaagaatctcaaacttatgataaatcctt  3615900                                          --------->YAB1                          --------->ARR11(3)                          --------->AHL20(1)                          <---------ARR11(3)                      <------ZmHOX2a(1)  <---------ATHB12                     ----------->GT1   --------->WOX13(1)                 <---------ALFIN1  <----------DOF2              ------>ZmHOX2a(1)                ----        --------->LBD16   <---------AHL20(1)           ----------->RAV1(2)        ---------->DOF2---- -->TOE1(2)--------->GLK1(1)  <-----------GT1     <-----------GT1            ---------->ID1<---------YAB1   ggaaaaaatcccgatttctccacaggaaaatatttctctttcaatcacagataaaccatctgattcctctgttctatttttcgctaaagactcattcttg  3616000                                                                                          --------->ATERF1(1)                                                                                          <------NtERF2                                                                                         <---------ATERF1(1)                                                                                        --------->DEAR3(1)                                                                                        <---------DEAR3(1)                                                                                       --------->RAP2.3(1)                                                                                      --------->ANAC46                                                                                   --------->MYB52(1)                                                                                   -------->P                                                                               ------>MYB46(1)                                                                               ------>MYB83                                                                             <---------MYB59 --------                                                                        <-------GAMYB--------->ATERF1(2)                                                                   ----------->HVH21 <---------ATERF1(2)                                                    ------>ZmHOX2a(2)   --------->At5g28300<---------DEAR3(1)          <---------YAB1                          <---------ARR11(3)--------->MYB52(1)--------->LBD16       --------->GLK1(2)                          --------->ARR11(3)------------>AtMYB77----------->HVH21  ---------->DOF2                             --------->YAB1      <---------WOX13(1)--------->DEAR3(2) ------>ID1             <---------ICU4     ---------->DOF2---------->DOF2   --------->DEAR3(2)  ----- ------>ARF1           --------->ICU4  <----------ID1 ---------->DOF2  <---------MYB46(3)------>NtERF2   tctcaaaagaatatgatcaagagccaaaattacagagcaatacaacaaagatgatctaaagaaagaagattgacggttaccgacttaccggcgacggtga  3616100                                                                                                    -                                                                                                   --                                                                                                   <-                                                                                                  ---                                                                                                  <--                                                                                                  <--                                                                                                  ---                                                                                                  <--                                                                                                  ---                                                                                                  <--                                                                                                  <--                                                                                                 ----                                                                                                 <---                                                                                                <----                                                                                               <-----                                                                                               ------                                                                                              <------                                                                                              -------                                                                                              -------                                                                                              <------                                                                                             <-------                           --------->ANAC58                                                --------->ALFIN1                           --------->ANAC46                                               <-------MYC3                        <---------ARR14(2)                                               <---------ANAC58                  <---------------------WRI1              <<<<<<<<<MYB2                  <---------ANAC46                <---------ETT(2)                        <------MYB83                     <---------ANAC58         <------ZmHOX2a(2) --------->ANAC58             <------MYB46(1)                  ------------   --------->MYB52(1)   --------->ARR14(2)             *TSS                              >>>>>>>>CAMTA3 ->At5g28300    --------->ETT(2)     <---------TOE2(2) <---------AtMYB61   <----------DOF2------->MYC3 ------>GT1    --------->DDF1---------->DOF2           --------->MYB59     ==========================   gtaaaaaacggatcaatgtcgacgaagacccgaaagacggaggtttttccaaagggtttggttttcttcaatttggcctttgccgaataacgcgtgggcc  3616200 -------->ALFIN1 ----->MYC3 ------MYC3 ------>ALFIN1 -------ANAC58 -------ANAC46 ------>O2 -------ANAC58 ------>TGA1a -------TGA1a -------O2 -->NtERF2               --------->At4g35610 ---NtERF2               <---------At4g35610 -----ANAC46           <---------WRKY12                         <---------ARR14(2) ----DEAR3(1)          <---------WRKY38(1)                      --------->ARR14(2) --->ATERF1(1)         <---------WRKY45                   ----------->GT1                <---------GLK1(2) ----------PIF3(2)    --------->WRKY18(1)                ----------->GT1                 --------->ARR14(2) -->ATERF1(1)         <<<<<<<<<<WRKY11               --------->MYB52(1)               ------>ZmHOX2a(2) -->PCF5              <<<<<<<<<<WRKY6   <------MYB83 <-----------GT1          <------MYB83 ---PCF2             <-----------HVH21  <------MYB46(1)  --------->LBD16<---------AHL20(2)         <- --PCF5              <--------ZAP1      ----------->GT1<---------LBD16 --------->AHL20(2)<---------ARR14(2) -->OsCBT    ------>NtERF2 ------------>CBF  <-----------GT1  ----------->ARR10<<<<<<<<<<MYB80    <-- =======bZIP_DOF --------->MYB52(1)    --------->MYB59<---------At5g28300     <------MYB46(1)     ---   gcgtggctctctctctgcccatcggtcaactcaattttggttcggtttaacaaattaaccgggtaaaatccgatataatttggtttgatcggattctcaa  3616300                                                <---------At4g35610     --------->LBD16                            --------->ZAT2    <---------ANAC46          --------->At4g35610                        ------>MYB83    <---------ANAC58          <---------At4g35610                        --------->MYB52(1)    <---------ANAC58          --------->ZAT2    --------->At4g35610      ------>MYB46(1)          <--   <---------LBD16            <---------ZAT2    <---------ZAT2      <-----------GT1         --------- --------AHL20(2)    --------->YAB1       <-----------HVH21         <<<<<<<<<GT-1          <--------- -------AHL20(2)    <---------ATHB51    --------->LBD16        <---------YAB1          <---------MYB52(1) ------>AHL20(2)    <---------ATHB12   <---------LBD16         --------->ICU4   <---------YAB1<------   ttaaatgcgggtttaaaattcaattatgttccagctctcttcccggtctgagcaggctcaagaacattattaaccaaacgttttgattcgttttttcttt  3616400                                                                                                   <-                                                                                       <---------At4g35610                                              <---------TOE2(3)                <---------------AGL15                                        <---------AHL20(2)                     --------------->AGL15     <----------DOF2                   --------->AHL20(2)                     ----------------->AG<<< <----------DOF2                       <---------AHL20(2)                     ----------------->AGL3 ---------GT1           <-----------GT1<---------AHL20(1)                   <-----------GT1    <----- ->ID1   <---------ANAC58              --------->AHL20(1)                <---------AHL20(2)  <------- --GT1   <---------ANAC46         --------->AHL20(2)                  ------->TEIL  <---------At5g28300 ----DOF2<---------ANAC58      --------->YAB1<-----------GT1    <---------YAB1----------------->AGL2   tttctttctttgtgtgtgtttagcattaaccaattttaaaataaaatttacgatgacaaaaatgttatgatgtatttttttccaattacagctattttat  3616500                                                                                               <-----                                                                                              -------                                                                                              <------                                                                                        <-----------GT1                                                                                   <---------AHL20(2)                                                                                  <---------ARR11(3)                                                                                  --------->AHL20(1)                                                                                  <---------AHL20(1) ----------GT1                                              --------->At4g35610   --------->AHL20(2) <<<<<<MYB98                                               <-----------RAV1(1)    --------->ARR11(3) ----TOE2(3)                <-----------GT1  --------->AHL20(2)------>NtERF2      <---------AHL20(2) --AHL20(2)         ----------->GT1  ---------->DOF2 --------->AHL20(2)<---------MYB52(1)     <------   gttactaaacaaatttgttaagttgtaaacttactcttcaaaagcattaaaaaaaaaaaatatgctgccttcagttagtagaaatatatttaacaatttt  3616600                         <---------YAB1 ----AHL20(2)         <---------YAB1 -->AHL20(2)        --------->YAB1                                          ----------->GT1 ---AHL20(2)     --------->YAB1                                       --------->DAG2         -------- ---AHL20(1)   <---------TOE2(3)              ----------->GT1        ---------->DOF2    --------->AHL20(2)   tttttttttgtatatttaagaatgatgtttattgaaattgtttttcatatgtaaaactcaaatgtaaatgcaaaagtgaagtttaaaaaaaaaaatcaaa  3616700  Previous    Next  AGI:  At1g10865.1    Description:  similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ61621.1) Range:  from: 3614539    to: 3616155    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g10870.1    Description:  AGD4 (ARF-GAP DOMAIN 4); ARF GTPase activator/ protein binding / zinc ion binding. similar to ARF GTPase-activating domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G60860.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ60682.1); similar to hypothetical protein OsI_008027 [Oryza sativa (indica cultivar-group)] (GB:EAY86794.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15408.1); contains InterPro domain BAR; (InterPro:IPR004148); contains InterPro domain Pleckstrin-like (InterPro:IPR001849); contains InterPro domain Pleckstrin homology-type (InterPro:IPR011993); contains InterPro domain A Range:  from: 3616610    to: 3623758    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.