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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                                                           ---------
                                                                                    <---------DAG2
                                                                                    <----------DOF2
                ------>ZmHOX2a(1)                                                 ------>NtERF2
       <------NtERF2                                                             --------->RAP2.3(2)
       --------->LBD16                                                         --------->LBD16
       ------>NtERF2                                                           <---------ATERF1(1)
      --------->RRTF1(2)                                                       ------>NtERF2
      --------->ANAC46                                                        --------->ANAC46
      --------->RRTF1(3)                                                      --------->DEAR3(1)
      --------->DEAR3(1)                                                     <---------LBD16<-------
      --------->RAP2.3(2)                                                 <---------At4g35610
      --------->RAP2.6(2)       ------>ZmHOX2a(1)               --------------------->WRI1<---------
     <---------LBD16       <---------ANAC58        <----------DOF2        --------->At4g35610
     --------->RAP2.3(1)   <---------ANAC58        <---------DAG2 --------->SPL7--------->RAP2.3(1)
 ------>ZmHOX2a(1)  ------>ZmHOX2a(1)   <---------ARR11(3)      ------>ZmHOX2a(1)--------->DEAR3(1)
 
tctccttcgccgcaatctccttcctcacttgcttcctcttcaatttcttcatcgcttttcgcttctccttacgactcatctccgccgctttctctttact  3388300
                                 <-----------RAV1(1)                                     <---------DOF5.7(2)
                               <---------ANAC58                                        --------->DOF5.7(2)
                               <---------ANAC58                                       --------->TOE1(3)
                          <----------DOF2                                             --------->TOE2(3)
                        <---------At4g35610                                          <---------ANAC58
                        ------>NtERF2                                                <---------ZAT6
                       --------->RAP2.3(2)                                           <---------ANAC58
                       --------->DEAR3(1)                                            <---------ANAC46
                      --------->RAP2.3(1)                    <---------ANAC58     <--------P
                      <------NtERF2                      <---------MYB52(1)     --------->LBD16
                     ------>NtERF2                     <---------ANAC58        --------->LBD16
                     --------->LBD16                   <---------ANAC58       <---------LBD16
                    --------->ANAC46               <---------DAG2          <-----------GT1
>ZAT14             --------->MYB46(3)              <----------DOF2      <---------AHL20(2)        <-
----GT1            <---------LBD16                <------------------------ANAC81<---------MYB52(1)<
-DOF2  <----------DOF2--------->DEAR4(2)     <<<<<<<<<TBF1   <---------ANAC58<---------LBD16      <-
 
ctcttcaaaactttccttctctcccgccgcttcttcgtgtcgctcttcttcttccttttcgtttgcttgctccatttttttcccggtagcgttaacctct  3388400
         <---------ANAC46
       <---------MYB46(3)
       --------->MYB55(2)
      --------->ALFIN1                               <-----------------AGL1
      <---------AtMYB61                       --------->MYB52(2)
      <---------DEAR3(1)              <---------ARR14(2)
<---------REM1(2)     --------->AHL20(2)    <---------MYB52(1)
----------->HVH21     <---------AHL20(2)    <--------P                                   -----------
--------ANAC58       <---------AHL20(2)    <-------GAMYB        --------->ZAT14     <---------AHL20(2)
----------DOF2       --------->AHL20(2)  --------->MYB59        <---------ZAT14    --------->YAB1
--------ANAC58    <---------GLK1(2)   --------->ARR14(2)  --------->MYB52(1) ----------->GT1   <----
 
ggcttcacggtggtggaaacagaatttaatttaggggtgcaaattcggttagtttgaaccgaaacggtatagtgaagaaatcgaaataaaaatggattaa  3388500
                                                                     <---------HSFB2a(2)
                                                                 <---------GLK1(1)
                                                                 --------->ZAT2
                                                                 <---------At4g35610
                                                                 --------->GLK1(1)
                                                                 <---------ZAT2
                       <---------MYB46(3)                        --------->At4g35610
                       <------MYB83                           --------->LBD16
                     <--------P                              --------->DEAR3(1)
            <---------ATERF1(1)                         <---------ANAC58
            <---------GLK1(1)               <---------ATERF1(1)<------NtERF2
         --------->LBD16                --------->TOE1(1)   <---------LBD16                        -
>GT1   <---------LBD16 <------MYB46(1) <---------LBD16  <---------ANAC58    --------->YAB1         <
-------GT1  --------->GLK1(1)   <------------CBF    <------------CBF --------->HSFB2a(2)    ------>ZmHOX2a(1)
 
accatactaaaccggagacccctagttggttcacctattgacctcggagactccaaattgctcgccggagctctcgaaatcagaaaactttcatcctctt  3388600
                                 <---------CCA1(1)
                                 <---------RVE1(1)
                           <-----------HVH21    <----------DOF2
             ------------>CBF   --------->ARR11(3)    <------------CBF
          <---------WOX13(1)    <---------ARR11(3)  <---------YAB1                 <---------HSFB2a(2)
         <------------CBF <----------DOF2    <-----------GT1         <---------ICU4--------->HSFB2a(2)
-------->At4g35610     <---------ALFIN1   ----------->GT1           <---------ATHB12
---------At4g35610  <-----------GT1  <---------AHL20(2)            <---------ARR11(3)             --
 
gtagctcaagccgattgacaatttctccactttcagatatttgatttgtaactttctcattgaaattcaaaatcattctccatcttctacaacgaggtct  3388700
                       <---------ANAC58
                       <---------ANAC58
                    <---------WOX13(1)
           <---------ANAC58                                                               <---------ALFIN1
           <---------ANAC58                                                             --------->ANAC58
<----------DOF2    <------------CBF    <------------CBF                                 --------->ANAC58
-------->ID1<----------DOF2  <---------ICU4      --------------->AtSPL8  <---------MYB52(1)------->TEIL
 
cgtctttttgttttgctttgtagattgcttaatctttgtgcaaattgtatgcgttgtacttccttctcaagtttcagtttgtctcttgaagacgcacttc  3388800
                                                                                 --------->HSFB2a(2)
                                                                                 <---------HSFB2a(2)
                                                                          <--------P
                                                                         <---------ANAC58
                                             --------->ANAC46            <---------ANAC58
                                          <-------TEIL                  <---------MYB46(3)
                                        --------->ARR14(2)        --------->ANAC58
                                        <---------ARR14(2)        --------->ANAC58          --------
                                    <---------At4g35610      --------->ANAC46<---------ANAC46      <
            <---------ANAC46     ---------->DOF2             --------->ANAC58<---------ANAC58      <
      <---------TOE1(2)     --------------->AGL15    <----------DOF2   <---------AtMYB61    --------
  --------->HSFB2a(2) ------>ZmHOX2a(1) <---------GLK1(2)    --------->ANAC58<---------ANAC58      <
 
atcttctccaacgtttcttatactcctcaaaccagattaagcagattcacacagttcttttgaccagcaacgcattggttgcttcgagatggaagacgaa  3388900
                                                                                                ----
                                                                                                ----
       --------->ZAT14               <------ZmHOX2a(1)                                        ------
     --------->ANAC46             <-----------RAV1(2)                            --------->ANAC46
     --------->REM1(1)           --------->ZAT14                           <---------ANAC58  -------
->ANAC58                         <---------ZAT14                           <---------ANAC58 ------>MYB46(1)
---------ANAC58         <---------CCA1(2)                                <---------YAB1     ------>MYB83
---------ANAC46      <------ZmHOX2a(2)                               --------->YAB1         --------
->ANAC58<---------ALFIN1------>ZmHOX2a(1)                       --------->ZAT14  --------->ANAC58  <
---------ANAC58      =======================HOX2a_HOX2a         <---------ZAT14  --------->ANAC58<--
 
atgcgtctacaacactctcattcgatcctatctcactacaggagaatacaagacttctcttgctctcttcactcatatgcttgcaagccatgtccaacca  3389000
                                                                <---------------AGL15
                                                               ----------------->AGL1
                                                               <-----------------AGL1
       <----------DOF2        <---------ANAC58              --------->ATERF1(1)
-->MYB83                      <---------ANAC58             <-------GAMYB
-->MYB46(1)                  --------->ZAT2               <---------ANAC46
->GAMYB<---------DAG2        --------->At4g35610          <---------bZIP60(2) <---------ARR11(3)
-->MYB46(3)                  <---------ZAT2               <---------ANAC58    --------->ARR11(3)
>P--------->TOE2(3)          <---------At4g35610   <---------ANAC58         --------->ANAC58
-----------GT1         ---------->DOF2             <---------ANAC58 <---------AtLEC2
-------MYB52(2)   <---------YAB1        <----------DOF2   <---------ANAC58  --------->ANAC58
 
aataacctcactttcccttctctgattaaagcagcttgctcatctttctctgtttcttatggcgttgccttacatggccaagctcttaaacggggttttc  3389100
                                                                                 <---------RVE1(1)
                                                                                 <---------CCA1(1)
                                                                                <---------ARR11(3)
       <---------MYB52(1)                                                       --------->ARR11(3)
    <-------TEIL                                                      --------->ARR11(3)
    ------>ZmHOX2a(2)                                      --------->At4g35610 --------->YAB1      <
   <------ZmHOX2a(2)                          ----------->GT1         <---------ARR11(3)<-----------GT1
  <---------ARR14(2)       <---------LBD16    <------MYB83 <---------ZAT2     <---------YAB1    <---
  --------->ARR14(2) <----------DOF2          <------MYB46(1)     <------ZmHOX2a(1)    <-----------GT1
 
tatgggatccatttgttcagacttcttttgtccggttctatggtgaagttggtgatttggagagctcgaggaagatgtttgatgatattttaaacccttg  3389200
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AGI:  At1g10320.1   
Description:  U2 snRNP auxiliary factor-related. similar to ATU2AF35B, RNA binding [Arabidopsis thaliana] (TAIR:AT5G42820.1); similar to ATU2AF35A, RNA binding [Arabidopsis thaliana] (TAIR:AT1G27650.1); similar to ATU2AF35B, RNA binding [Arabidopsis thaliana] (TAIR:AT5G42820.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO46909.1); contains InterPro domain Zinc finger, CCCH-type; (InterPro:IPR000571); contains InterPro domain RNA recognition, region 1; (InterPro:IPR003954); contains InterPro domain RNA recognition motif, RNP-1; (InterPro:IPR000504); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains
Range:  from: 3384166    to: 3388375    Orientation: Reverse
Links:  TAIR  MIPS 
 
AGI:  At1g10330.1   
Description:  pentatricopeptide (PPR) repeat-containing protein. similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT5G66520.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN60147.1); contains InterPro domain Pentatricopeptide repeat (InterPro:IPR002885)
Range:  from: 3388749    to: 3390152    Orientation: Forward
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.