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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
--------------->
AtSPL3
--------->
WOX13(1)
---------->
DOF2
<------
ZmHOX2a(2)
<---------
AHL20(2)
<---------
AHL20(2)
--------->
MYB59
--------->
ANAC58
--------->
AHL20(2)
---------
<---------
MYB52(1)
<---------
DAG2
--------->
AHL20(2)
--------->
TOE2(3)
----------
---------->
AtMYB77
<----------
DOF2
--------->
AHL20(2)
<----------
DOF2
--------->
MYB52(1)
----->
LBD16
<---------
ATHB12
--------->
ANAC46
<-----------
GT1
--------->
AHL20(2)
<----
-->
ZmHOX2a(1)
--------->
YAB1
--------->
ANAC58
<---------
YAB1
<---------
YAB1
------------>
MYB.PH3(1)
tgaacagttagatcaatcgtactctccaacttttctacgcacaaaatttaaaaatttgatagtttttcttttcattaaataaaagacgagaaacggttat
2993000
<---------------------
WRI1
------->
GAMYB
--------->
DEAR3(1)
--------->
MYB46(3)
--------->
AHL20(2)
<---------
ANAC58
---------->
DOF2
<---------
AHL20(2)
<---------
ANAC58
<----------
ID1
<---------
ANAC58
--------->
AHL20(2)
>
At5g28300
<------------
AtMYB77
<---------
ANAC58
--------->
HSFB2a(2)
->
GT1
--------->
DEAR3(2)
<---------
ARR14(2)
<---------
AHL20(2)
<------
ZmHOX2a(1)
-----
YAB1
--------->
ARR14(2)
----------->
GT1
--------->
ANAC55(2)
<---------
AHL20(2)
---
atttgcctgagtagaaaccgccgataacaacaaagtggaaaatatggctagtttgtatttttaagtaatttctcgatttaatttacttaggacaaaaatg
2993100
--------->
GLK1(2)
--------->
ARR11(3)
<---------
ARR14(2)
--------->
ARR14(2)
<---------
GLK1(2)
<---------
ARR11(3)
<---------
HSFC1(2)
<---------
HSFB2a(1)
--------->
ATHB12
--------->
HSFC1(2)
<---------
AHL20(2)
--------->
HSFB2a(1)
<---------
YAB1
<------------
CBF
<---------
TOE2(3)
<---------
AHL20(2)
--------->
AHL20(2)
<--------
--------->
ATHB12
--------->
AHL20(2)
<---------------
AtSPL8
<---------
AHL20(2)
<---------
AHL20(2)
<------------
CBF
<---------
AHL20(2)
---------->
ID1
<---------
AHL20(2)
----------->
GT1
--------->
AHL20(2)
<-----------
RAV1(1)
<-----------
GT1
<---------
ZAT14
<---------
AHL20(2)
<---------
AHL20(2)
<----------
DOF2
--------->
ICU4
--------->
AHL20(2)
---->
TEIL
<----------
DOF2
----------->
ARR10
----------->
GT1
<-----------
GT1
--------->
ZAT14
tatttatagagaaatcgtgcttttatttatttattgagaagattcttttttgttgttttgtaaatatttatttaacatttttattggtacagtgacttat
2993200
<---------
AHL20(2)
--------->
AHL20(2)
--------->
YAB1
<-----------
GT1
--------->
ARR11(3)
--------->
AHL20(2)
<---------
ARR11(3)
<---------
AHL20(2)
--------->
YAB1
<------
ZmHOX2a(1)
<---------
AHL20(2)
<xxxxxxxxxxxxxxxxxxxxxx
smallRNA(se3)
<---------
TOE2(3)
<---------
ICU4
--------->
ANAC46
<---------------
AGL15
--------->
ICU4
--------->
KAN4(2)
--------------->
AGL15
--------->
YAB1
<----------
DOF2
--------->
CCA1(2)
--------->
AHL20(2)
------------>
CBF
--------->
YAB1
<<<<<<<<<<
GT-3b
<---------
GLK1(1)
--------->
YAB1
<-----------
GT1
----------->
TBP
<---------
YAB1
----------->
GT1
<---------
YAB1
<---------
ANAC46
-
ANAC46
---------->
DOF2
--------->
AHL20(2)
---------->
ID1
<----------
TaMYB80
--------->
TOE2(3)
gttttacaatataaaggatttataaaaataaaaattatttttctttgtctcttaaatatggatatacccaaatatcattttccataaaaattcggtgtta
2993300
--------->
YAB1
--------->
AHL20(2)
-----------
------------>
CBF
<xxxxxxxxxxxxxxxxxxxxxxx
smallRNA(i2)
<xxxxxxxxxxxxxxxxxxxxxxx
smallRNA(i2)
<xxxxxxxxxxxxxxxxxxxxxx
smallRNA(se3)
<xxxxxxxxxxxxxxxxxxxxxxx
smallRNA(se3)
------->
TEIL
<xxxxxxxxxxxxxxxxxxxxxxx
smallRNA(se3)
<---------
GLK1(2)
--------->
ANAC46
<xxxxxxxxxxxxxxxxxxxxxx
smallRNA(se3)
<-------
TEIL
<xxxxxxxxxxxxxxxxxxxxxxx
smallRNA(se3)
--------->
TOE2(3)
----------->
TBP
<xxxxxxxxxxxxxxxxxxxxxx
smallRNA(l2)
<---------
CCA1(2)
<---------
YAB1
<xxxxxxxxxxxxxxxxxxxxxx
smallRNA(si3)
--------->
AHL20(2)
----
tccaaatctcaaaaccctatttttcatagatgtttttgtttctcttataaattcatcactgaatctctcatgctcaccattaattctcagcaataaaaac
2993400
--------->
ANAC58
xxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(se3)
<---------
LBD16
<xxxxxxxxxxxxxxxxxxxxxxxx
smallRNA(se3)
--------->
At4g35610
--------->
MYB52(1)
<xxxxxxxxxxxxxxxxxxxxxxx
smallRNA(se3)
---------->
DOF2
--------->
ZAT2
--------->
ANAC58
--------->
TOE2(3)
>
TBP
--------->
YAB1
--------->
At4g35610
---------->
DOF2
------>
DOF2
<---------
ATHB12
<----------
DOF2
--------->
ZAT6
<---------
YAB1
---------->
DOF2
aaaga
atgaacgattcaatgaaagctccaaaattctttaaaaaccagctaaaactagcggaagcacattatcaaagaggtaatctaaaaggagccattga
2993500
------>
ZmHOX2a(1)
--------->
ANAC58
--------->
GLK1(2)
<-----------
HVH21
----------->
HVH21
<------
MYB83
=====================
HOX2a_HOX2a
<------
MYB46(1)
------>
ZmHOX2a(2)
--
<---------
MYB46(3)
<------
ZmHOX2a(2)
--
--------->
MYB59
======================
HOX2a_HOX2a
---
<---------
TOE2(3)
<---------
ARR11(3)
xxx
<---------
TOE1(3)
--------->
ARR11(3)
xxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(fl3)
--------->
MYB52(1)
<---------
MYB55(2)
--------->
ARR14(2)
--------->
ANAC58
<---------
WOX13(1)
--------->
ANAC58
--------->
MYB46(3)
<---------
GLK1(2)
--------->
ANAC58
<---------
YAB1
<---------
MYB52(1)
--------->
ANAC46
<---------
ARR14(2)
<---------
ATHB12
----
aatcgtgaatgacttaacgtttggtcacccaaacacatcttcaaaccaccatgagatctcacagattctcctcgcctatcaaatcaacttgactagccaa
2993600
<---------
YAB1
<-----------
RAV1(2)
xxxxxxxxxxxxxxxxxxx>
smallRNA(le3)
<-------
TEIL
<---------
ARR14(2)
<---------
At4g35610
<---------
ARR11(3)
<xxxxxxxxxxxxxxxxxxxxxxx
smallRNA(fl3)
--------->
ARR11(3)
<---------
MYB52(1)
---------->
DOF2
--------->
ARR11(3)
--------->
ANAC58
xxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(se3)
---------->
DOF2
------->
ANAC58
--------->
GLK1(1)
--------->
ARR14(2)
--------->
At4g35610
xxxxxxxxxxxxxxxxxxxxxx
------->
ANAC58
<---------
GLK1(1)
xxxxxxxxxxxxxxxxxxxxxx>
smallRNA(le3)
--------->
ZAT14
------>
DAG2
--------->
ANAC46
--------->
GLK1(2)
<xxxxxxxxxxxxxxxxxxxxxxx
smallRNA(si3)
xxxxxxxxxxxxxxxxxxxx>
smallRNA(fl3)
<xxxxxxxxxxxxxxxxxxx
smallRNA(fl3)
<---------
ZAT14
----
------>
DOF2
--------->
ANAC58
<---------
GLK1(2)
<-----------
HVH21
<---------------
AtSPL8
<----
aaagccagtttcacacactacgatatcttgagaatctcaaatccgttctgtagccatcagatgattcaaagaaagtacagagacatcttggttaagctct
2993700
<------
ZmHOX2a(2)
<---------
ARR11(3)
<---------
ARR14(3)
<---------
AGP1
--------->
ARR14(3)
--------->
LBD16
<----------
DOF2
<---------
ANAC46
<------
NtERF2
<---------
ANAC58
------>
ZmHOX2a(1)
------>
NtERF2
<---------
ICU4
--------->
LBD16
<---------
RAP2.6(3)
--------->
ICU4
====================
HOX2a_HOX2a
--------->
LBD16
--------->
YAB1
--------->
ARR11(3)
--------->
RAP2.6(2)
<---------
ICU4
--------->
ARR14(2)
<---------
AHL20(2)
--------->
At4g35610
<---------
ANAC58
<------
ZmHOX2a(2)
xxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(se3)
--------->
AHL20(2)
--------->
ARR14(2)
------>
NtERF2
--------->
DEAR3(1)
<---------
AHL20(2)
===================
HOX2a_HOX2a
----------->
RAV1(1)
--------->
ANAC46
--------->
HSFB2a(2)
<---------
ARR14(2)
<---------
ETT(1)
<xxxxxxxxxxxxxxxx
smallRNA(i)
-------->
HAHB4
------>
ZmHOX2a(2)
--------->
ICU4
--------->
ANAC46
<---------
ATERF1(2)
<---------
YAB1
<-----------
ARR10
---------->
DOF2
--------->
LBD16
--------->
ATERF1(2)
--------->
ICU4
xxxxxxxxxxxxxxxxxx>
smallRNA(se3)
>
smallRNA(se3)
<---------
RAP2.6(2)
<---------
YAB1
----------->
ARR10
<----------
ID1
---->
P
--------->
AHL20(2)
<---------
At4g35610
<---------
AtLEC2
<---------
ARR14(2)
-----
ALFIN1
xxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(le3)
<---------
YAB1
xxxxxxxxxxxxxxxxxxxxxx>
smallRNA(se3)
accccgacacaaataaatctattgccgccaaatcagctttcgagattattaattatgcgtggaagatcttgtccgatcctgaaaaacgaaaagattacaa
2993800
<---------
ALFIN1
------->
TEIL
<------
ZmHOX2a(2)
--------->
ARR11(3)
--------->
HSFB2a(2)
--------->
ICU4
<---------
HSFB2a(2)
<---------
ANAC58
<---------
TOE2(3)
<-------
TEIL
<---------
ARR11(3)
<---------
ANAC58
---------->
DOF2
<---------
YAB1
--------->
LBD16
--------->
ALFIN1
<----------
DOF2
tatcaaaaaaaggtttaagtga
agatgattcatgtctccagaagatcatgaaccacatcaaacagtgaggcaagggtttcatgtctttcttgggaattgg
2993900
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AGI:
At1g09260.1
Description:
DNAJ heat shock N-terminal domain-containing protein. similar to DNAJ heat shock N-terminal domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G25560.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69372.1); contains InterPro domain Heat shock protein DnaJ; (InterPro:IPR003095); contains InterPro domain Heat shock protein DnaJ, N-terminal; (InterPro:IPR001623); contains InterPro domain Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609)
Range:
from: 2993406
to: 2993822
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.