Search
Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
Go to graphical and table display
1 10 20 30 40 50 60 70 80 90 100
--------->
AHL20(1)
<---------
AHL20(1)
--------->
AHL20(2)
--------->
YAB1
<---------
ATHB51
<---------
ATHB12
------>
ZmHOX2a(2)
<---------
GLK1(1)
<------
ZmHOX2a(2)
--------->
GLK1(1)
--------->
ARR11(3)
<---------
ARR14(2)
--------->
YAB1
<---------
ARR11(3)
--------->
TOE2(3)
--------->
ARR14(2)
<-------
TEIL
<---------
TOE1(2)
<------
ZmHOX2a(2)
------>
ZmHOX2a(1)
====================
HOX2a_HOX2a
--------->
LBD16
<---------
YAB1
--------->
AGP1
------>
ZmHOX2a(1)
---------
LBD16
<---------
AHL20(2)
--------->
ARR11(3)
-------->
TOE1(2)
<---------
ARR11(3)
------>
ZmHOX2a(2)
--------->
RAV1(2)
<-------
TEIL
--------->
YAB1
----------->
RAV1(1)
ttcctgggatctccaattataatttagaaatcaaaaaccccagacaaaccaaaatcaacaaattcatagatccataataatcctgatccaacatttgaga
2976400
<---------
AGP1
<---------
ARR11(3)
--------->
ARR14(2)
<---------
ARR14(2)
------->
TEIL
--------->
ARR11(3)
<---------
CCA1(2)
<---------
GLK1(1)
--------->
GLK1(1)
--------->
ARR11(3)
<---------
ARR14(2)
<---------
ARR11(3)
========================
HOX2a_HOX2a
<------
ZmHOX2a(1)
------>
ZmHOX2a(2)
--------->
ANAC58
<---------
At4g35610
<---------
ANAC46
--------->
ANAC58
--------->
At4g35610
<---------
AtLEC2
--------->
TOE2(3)
--------->
ANAC46
<-----------
HVH21
--------->
ARR14(2)
--------->
YAB1
------>
ZmHOX2a(2)
acaaactatcagatgaaaacgaggatatcgtagcatggatcttaaactcgtagcataaatcacattaaaactcaaattgaagaaatagatcgcaagccag
2976500
-
-
<-
<------
NtERF2
---------
<---------
DEAR3(1)
--------->
ALFIN1
<---------
ANAC46
<---------
LBD16
--------->
ATERF1(1)
------>
NtERF2
<------
NtERF2
<---------
RRTF1(1)
------>
NtERF2
<---------
RAP2.3(1)
<---------
RRTF1(3)
<---------
RAP2.3(2)
<---------
DEAR3(1)
<---------
RRTF1(2)
<---------
LBD16
<-----------
RAV1(1)
===========================
===========================
<------
ZmHOX2a(1)
------>
ZmHOX2a(1)
<---------
ATERF1(1)
--------->
ANAC46
<---------
REM1(1)
<---------
HSFB2a(2)
<-----
--------->
ANAC58
<---------
ZAT6
--------->
HSFB2a(2)
<-------
--------->
ANAC58
--------->
ZAT14
---------->
DOF2
--------->
MYB52(1)
-
--------->
MYB52(1)
<---------
ZAT14
--------->
MYB59
--------->
LBD16
<---------
At4g35610
aacacaaacagacgcatcatcaggaagatagagtatagagatagagatgtagaaattagatac
catcaaagcgctcctcgaaaataactgcggcggaggc
2976600
<---------
ARR11(3)
--------->
LBD16
--------->
LBD16
--------->
ANAC46
--------->
LBD16
--------->
HSFC1(2)
<---------
HSFB2a(1)
<---------
At4g35610
<---------
HSFC1(2)
----->
ZmHOX2a(2)
--------->
HSFB2a(1)
-------->
ANAC58
<--------
HAHB4
<---------
ZAT2
-----
ZmHOX2a(2)
<---------
ICU4
--------->
At4g35610
>
ATERF1(1)
--------->
YAB1
--------->
ZAT2
=====
HOX2a_HOX2a
<------
ZmHOX2a(1)
<-----------
ARR10
======
HOX2a_HOX2a
<---------
TGA1a
------>
ZmHOX2a(2)
<--------
-
NtERF2
--------->
O2
--------->
ICU4
<------
ZmHOX2a(2)
---------
--
DEAR3(1)
--------->
YAB1
<---------
O2
<---------
ATHB12
<---------
ARR14(2)
<----------
-------->
ANAC58
--------->
CCA1(2)
--------->
ANAC46
--------->
ARR14(2)
<------
ZmHOX2a(2)
gatcgcaacaagaccgataagaattagagagacgaggctaggaatcattttcgccat
tgctaaaaaaaactcagatcggagcttccccgagatcagatga
2976700
<---------
At4g35610
--------->
ZAT18
*
TSS
<---------
At4g35610
--------->
STY1(2)
<---------
LBD16
--------->
ANAC58
--------->
ARR11(3)
--------->
ANAC58
-
<---------
ARR11(3)
--------->
At4g35610
<---------
ANAC46
<---------------
AtSPL8
--------->
ZAT2
<----------
DOF2
--------->
bZIP60(2)
--------------->
AtSPL3
<---------
At5g28300
<---------
STY1(2)
<---------
TOE2(3)
<
-
At4g35610
----------->
RAV1(2)
<------
ZmHOX2a(1)
<---------
AHL20(2)
-----
>
At4g35610
<---------
ARR11(3)
--------->
ALFIN1
--------->
At4g35610
<---------
YAB1
<----
-
RAV1(2)
--------->
ARR11(3)
<------
ZmHOX2a(1)
<---------
ZAT18
--------->
AHL20(2)
----------
tgaagatgtacaagacctggagcttatatataccgcgaggagaggagctagc
aagtgagctttgctctcatggattttattttaggctacgtcgtgtaaa
2976800
--------->
CCA1(2)
--------->
ARR14(2)
<---------
ARR14(2)
--------->
At4g35610
<-----------
HVH21
<-----------
TGA1
<---------
ANAC55(2)
--------->
ANAC46
--------->
ANAC58
--------->
ANAC58
<---------
O2
--------->
TGA1a
<---------
TGA1a
--------->
ANAC55(2)
--------->
At1g77200
===============
MYC_MYB
----------->
HVH21
------------>
CBF
--------->
O2
<-----------------
AGL1
<---------
At4g35610
--------->
ANAC58
------->
GAMYB
--------->
bZIP60(2)
--------->
bZIP60(2)
--------->
O2
--------->
ANAC46
--------->
ANAC55(1)
--------->
ANAC55(1)
<---------
ANAC55(2)
<---------
ALFIN1
--------->
ANAC46
================
MYC_MYB
--------->
ANAC58
--------->
MYB46(3)
------>
NtERF2
--------->
DEAR3(2)
-------->
At4g35610
<------------
AtMYB77
<---------
bZIP60(2)
---------
At4g35610
--------->
MYB52(1)
<---------
TOE2(3)
---->
ARR14(2)
<---------
ANAC55(2)
<------------
CBF
-----
ARR14(2)
--------->
ANAC55(2)
<-------
TEIL
--------->
YAB1
<---
->
GT1
--------->
ANAC55(2)
<-----------
HVH21
<---------
YAB1
---------->
DOF2
tctgcagccacgtaatccaataggtaaccgacacgtcagatacatttgtcattgagaatgacatgtcgttatagtattggataaaacgggagaaagaagg
2976900
----------->
GT1
<---------
ANAC46
--------->
AHL20(1)
<---------
ARR11(3)
--------->
ARR11(3)
---------->
DOF2
<---------
DEAR3(1)
<-------
MYC4
<---------
ABI4(1)
<-------
MYC3
--------->
ZAT18
------->
MYC3
<------
MYB83
------->
MYC4
<---------
DEAR3(2)
------->
MYC2
<------
MYB46(1)
<-------
MYC2
<---------
MYB46(3)
<---------
ANAC55(2)
--------->
MYB46(2)
<---------
ANAC46
<---------
DEAR3(1)
--------->
ANAC55(2)
<---------
AtMYB61
<--------
ABF1
--------->
MYB111(2)
================
bZIP_DOF
<---------
ZAT14
--------->
TGA1a
--------->
MYB55(2)
<---------
O2
--------->
ALFIN1
----------->
HVH21
--------->
MYB111(1)
--------->
CCA1(2)
<---------
MYB52(1)
--------->
ANAC58
==========================
MYC_MYB
--------->
TOE1(3)
<---------
TGA1a
<---------
MYB55(1)
--------->
TOE2(3)
--------->
O2
<--------
P
<--------
HAHB4
--------->
ARR11(1)
<---------
MYB46(3)
<------
<---------
ICU4
---------->
DOF2
--------->
REM1(2)
<---------
MYB46(3)
<---------
ANAC46
--------->
ATHB51
<---------
ARR11(3)
--------->
CCA1(2)
--------->
At5g28300
<----------
DOF2
--------->
ICU4
======================
bZIP_DOF
<-------
GAMYB
--------->
ZAT18
------
DEAR3(1)
--------->
ANAC58
============================
MYC_MYB
<---------
ZAT18
<---
ctgtgcataattagccttaagcaaaagatttgacacgtgtaaagatattagcggttggtgcggtgatataaacaaaaaacaagtgtgcttctcgtggaga
2977000
<-------
GAMYB
------>
ZmHOX2a(2)
<---------
MYB46(3)
<------
ZmHOX2a(2)
--------->
MYB111(2)
<---------
GLK1(1)
<-----------
RAV1(1)
--------->
GLK1(1)
--------->
MYB52(2)
--------->
ARR14(2)
--------->
MYB55(2)
<---------
ARR11(3)
<------
MYB46(1)
<-----------
ARR10
<---------
ANAC58
<---------
MYB52(1)
--------->
ARR11(3)
<---------
ANAC58
<---------
RAP2.6(3)
---------->
DOF2
<---------
LBD16
--------->
AHL20(1)
<---------
MYB46(3)
<---------
ZAT6
<---------
ARR14(2)
<---------
AHL20(1)
<---------
At4g35610
----------->
GT1
<---------
AGP1
--------->
ARR11(3)
------>
ZmHOX2a(2)
---
ANAC46
<---------
ARR14(3)
--------->
AHL20(2)
<---------
ARR11(3)
------
ZAT14
<---------
CCA1(2)
----------->
GT1
<------
MYB83
--------->
ANAC55(2)
------->
GAMYB
gtagagtaaacaaaagaagcagatctctcgggtgttttagtaaatatatagcttggtttgttggattaaacgtgatctcagccgttagattccaactgaa
2977100
<---------
ARR11(3)
--------->
ARR11(3)
<------
NtERF2
<---------
YAB1
<---------
PCF2
--------->
AHL20(2)
--------->
ALFIN1
<---------
AHL20(2)
<---------
ANAC58
--------->
AHL20(2)
<---------
ANAC46
<---------
ANAC46
<---------
AHL20(2)
<---------
HSFB2a(2)
<---------
ANAC46
--------->
AHL20(2)
<----------
DOF2
--------->
AHL20(2)
<---------
ANAC58
<---------
WOX13(1)
----------->
GT1
--------->
YAB1
<---------
AHL20(2)
---------->
DOF2
<------
ZmHOX2a(1)
----------->
GT1
--------->
AHL20(2)
tttttaaatctacaaaaattctaaaagcgtgggccgagaggaagattgatgtgtgtattttgggccgataaaattttaaattataaatctttttgtgttg
2977200
<---------
ANAC46
<---------
ANAC58
<-----------
ARR10
---------->
DOF2
<---------
ANAC58
<---------
ARR11(3)
--------->
ANAC58
<---------
ANAC58
--------->
ARR14(2)
--------->
ANAC58
<---------
ANAC46
--------->
GLK1(2)
--------->
YAB1
<---------
ANAC46
---------->
DOF2
<---------
ANAC58
<---------
ICU4
---------->
DOF2
atggtttttttgtgtgaagaagattagcgtaaaagctactcaaaatctgacttggattcaaatttgataatgacacccattgaagcaaagttttttcaaa
2977300
Previous
Next
AGI:
At1g09210.1
Description:
calreticulin 2 (CRT2). Identical to Calreticulin-2 precursor (CRT2) [Arabidopsis Thaliana] (GB:Q38858;GB:O04152;GB:O80486;GB:Q94AW7); similar to CRT1 (CALRETICULIN 1), calcium ion binding [Arabidopsis thaliana] (TAIR:AT1G56340.2); similar to CRT1 (CALRETICULIN 1), calcium ion binding [Arabidopsis thaliana] (TAIR:AT1G56340.1); similar to Calreticulin precursor (GB:P93508); contains InterPro domain Calreticulin/calnexin, P; (InterPro:IPR009033); contains InterPro domain Calreticulin/calnexin; (InterPro:IPR001580); contains InterPro domain Endoplasmic reticulum targeting sequence; (InterPro:IPR000886); contains InterPro domain Concanavalin A-lik
Range:
from: 2972844
to: 2976752
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.