Search
Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
Go to graphical and table display
1 10 20 30 40 50 60 70 80 90 100
<---------
AHL20(2)
--------->
AHL20(2)
<---------
TOE2(3)
---------->
DOF2
<---------
YAB1
<---------
AHL20(2)
--------->
AHL20(2)
--------->
AHL20(2)
<---------
YAB1
--------->
AHL20(2)
----------->
GT1
--------->
ANAC58
<---------
AHL20(2)
--------->
AHL20(2)
<-----------
GT1
--------->
ANAC58
----
TOE2(3)
<----------
DOF2
--------->
YAB1
--------->
ANAC58
--------->
AHL20(2)
-
YAB1
<---------
DAG2
<---------
YAB1
--------->
ANAC58
--------->
YAB1
<-
gtttttaattttaaaaattgttcaactttatattattaaagtataataaataaaaccacaagaaaatttacaaaatgtaataaaaaaccaagtaaatgga
2805000
---------->
DOF2
----------->
RAV1(1)
<----------
ID1
--------->
ANAC58
--------->
LBD16
<---------
REM1(1)
--------->
SPL7
------>
ZmHOX2a(1)
<---------
AtMYB61
<------
NtERF2
----------->
RAV1(2)
<-------
TEIL
----------->
RAV1(1)
--------->
ANAC58
<----------
DOF2
-----
ZmHOX2a(1)
<---------
ANAC46
<------
ZmHOX2a(1)
--------->
GLK1(1)
----------->
HVH21
<-
aggatgcattggtgtagccacataagtaggggcggaaggcaacaaagaaggagccatctttatcgcaactcctgaaactgagtctgaccctctacttact
2805100
-------
-------
-------
--------->
ANAC58
--------->
ANAC46
<---------
At4g35610
--------->
ANAC58
--------->
At4g35610
<---------------
AtSPL3
<---------
ZAT14
<-----------
RAV1(1)
<---------------
AtSPL8
--------->
ZAT14
----
<---------
AHL20(2)
--------->
TOE2(3)
<---------
ICU4
--------->
REM1(2)
---------
DOF2
--------->
YAB1
--------->
ICU4
--------->
ALFIN1
-----
tcttttattgctgctctctctcattcttaattccaatctaataagtacgggctctgctagtacagatagagagagagagagagtgtagaccaagacacac
2805200
--------->
MYB52(1)
----------->
RAV1(1)
<---------
ZAT18
--------->
ANAC46
<---------
ZAT14
----------->
RAV1(1)
--------->
ZAT14
--------->
ANAC46
-------->
P
-->
ANAC58
------->
TEIL
-->
ANAC58
<---------
ANAC46
--------->
GLK1(2)
-->
ANAC46
------->
GAMYB
<---------
ANAC58
--------->
ARR11(3)
<---
------->
RAV1(1)
--------->
TOE2(3)
------>
ZmHOX2a(1)
<---------
ARR11(3)
<-----
---->
ANAC46
---------->
DOF2
<----------
DOF2
<---------
ANAC58
<-----------
ARR10
<-------
aacacaacacaacagagaaagagaattacattagttttttttctttcacattcctcttgcttattgctcttcaaaatctacctgtacactcttctctttt
2805300
<---------
YAB1
--------->
AHL20(2)
--------->
AHL20(2)
<---------
AHL20(2)
--------->
ICU4
<---------
YAB1
<---------
ICU4
--------->
AHL20(2)
<---------
ANAC46
<---------
AHL20(2)
<---------
ANAC58
<---------
ATHB51
<---------
ANAC58
<------
<---------
ANAC58
--------->
ICU4
<----------
DOF2
---------->
ID1
<--------
---------
CBF
--------->
YAB1
<----------
DOF2
*
TSS
<---------
DAG2
----
AHL20(2)
----------->
TBP
<---------
ZAT18
<----------
DOF2
<----------
DOF2
---
DOF2
------>
ZmHOX2a(1)
---------->
ID1
<---------
ANAC58
<-----------
GT1
attgtcttgtttgtataaatcatctcctacaaaaataattaatataagttgtcccctttctctttgcttctct
gtttttcgcaattttctctttttgatt
2805400
------->
TEIL
<----
------>
ZmHOX2a(2)
--------->
ARR14(2)
====================
HOX2a_HOX2a
<---------
ARR11(1)
------>
ZmHOX2a(2)
--------->
GLK1(2)
=====================
HOX2a_HOX2a
<---------
ARR14(2)
<---------
At4g35610
<---------
CCA1(2)
--------->
CCA1(2)
--------->
LBD16
------
<---------
ALFIN1
<------
ZmHOX2a(2)
<---------
ANAC46
------
<---------
ZAT18
--------->
AGP1
<---------
At4g35610
-------
<---------
ZAT14
<---------
AGP1
<---------
LBD16
-------
--------->
ZAT14
<---------
ARR14(2)
--------->
At4g35610
<------
--------->
AtMYB61
--------->
ARR14(2)
------>
NtERF2
<-----------
ARR10
<---------
ALFIN1
--------->
ARR11(3)
<---------
DEAR3(1)
--------
--------->
ANAC46
<---------
At4g35610
------>
ZmHOX2a(1)
<---------
ARR14(2)
<------
NtERF2
--------->
ANAC46
<---------
ANAC58
===============
HOX2a_HOX2a
<---------
ARR14(1)
<---------
ANAC58
--------->
ANAC46
<---------
ARR11(3)
<---------
At4g35610
<-------
<---------
ANAC58
--------->
ANAC58
<---------
GLK1(1)
<---------
TOE1(2)
<---------
ANAC58
---
GLK1(2)
--------->
ARR14(2)
<---------
ANAC58
--------->
GLK1(1)
--------->
At4g35610
<-----------
HVH21
-
YAB1
<---------
ANAC46
--------->
ANAC58
--------->
GLK1(1)
<---------
TOE2(2)
<---------
ANAC58
<---
ctcttccttccttggaatccaccacactccatttgcttcttctgagatctgatctctctcctaggtgatgcgctgcggag
atggcgaatcttgtccccgg
2805500
<------
NtERF2
--------->
LBD16
<---------
ATERF1(1)
------>
NtERF2
--------->
O2
--------->
ATERF1(2)
===========================================
bZIP_DOF
<---------
O2
<---------
ATERF1(2)
<---------
bZIP60(1)
<-----------
GT1
--------->
bZIP60(1)
--
NtERF2
<---------
TGA1a
--->
LBD16
--------->
TGA1a
--------->
ANAC46
>
NtERF2
--------->
ANAC58
--------->
bZIP60(2)
<---------
ARR14(2)
-->
ANAC46
------->
MYC3
--------->
DEAR3(1)
--------->
ANAC58
-->
LBD16
<---------
GLK1(2)
--------->
DEAR3(1)
--------->
ARR14(2)
--------->
ICU4
---
DEAR3(1)
<-------
MYC3
<---------
DEAR3(1)
--------->
ANAC58
-
->
ATERF1(1)
<---------
ALFIN1
--------->
ATERF1(1)
<----------
DOF2
<--
--
LBD16
--------->
ANAC58
--------->
DEAR3(2)
--------->
ATERF1(1)
<-----------
GT1
<-------
------
ANAC46
<---------
At4g35610
<---------
LBD16
------>
ZmHOX2a(1)
<---------
ICU4
<-------
cgttttactcaagcttctccagcacatgaacaccgacgtcaaaatcgccggcgaacacaggtcctctcttttacaagtcatcagtattgttcccgcttta
2805600
--------->
TGA1a
<---------
TGA1a
--------->
ANAC58
--------->
O2
--------->
bZIP60(1)
--------->
ANAC55(1)
--------->
ANAC46
=======================================
bZIP_DOF
<---------
ATHB12
<---------
O2
<---------
DEAR3(1)
<XXXXXXXXXXXXXXXXXXXX
MIR1886.2
<---------
bZIP60(1)
<------
NtERF2
--------->
LBD16
--------->
TOE2(3)
--------->
ANAC58
----------->
RAV1(2)
-------->
LBD16
<---------
HSFB2a(2)
---------->
DOF2
==========================
bZIP_DOF
-------
LBD16
--------->
HSFB2a(2)
==============================
bZIP_DOF
--------->
ANAC55(2)
--
DAG2
<---------
LBD16
<---------
CCA1(2)
----------->
HVH21
<-----------
GT1
--------->
ATHB12
---
DOF2
<---------
At4g35610
<----------
DOF2
------>
ZmHOX2a(1)
<----------
DOF2
<---------
YAB1
gccggaggtgagctattcccgaatcaaggcttttatctcaaagtctctgattcctctcacgccacttatgtctctttacctgatgaacacgatgatttga
2805700
--------->
ARR14(2)
--------->
HSFC1(2)
<---------
ARR11(3)
--------->
HSFB2a(1)
<------
MYB46(1)
<---------
HSFC1(2)
<------
MYB83
<---------
HSFB2a(1)
<------
ZmHOX2a(2)
<-----------
ARR10
--------->
CCA1(2)
<---------
ARR11(1)
--------->
AGP1
<---------
ARR14(2)
------->
TEIL
<---------
ARR14(2)
<---------
ARR14(2)
---
--------->
ARR14(2)
--------->
ARR14(2)
<---
<---------
ARR11(3)
<---------
ARR14(1)
------>
ZmHOX2a(1)
--------->
ARR11(3)
<-------
TEIL
<---------
CCA1(2)
------>
ZmHOX2a(1)
=======
<----------
ID1
--------->
MYB59
<---------
YAB1
----------->
RAV1(2)
<---------
ZAT6
<-------
ttcttagcgacaagatccaattaggtcagtatattcatgttgatagagtcgaatcttcttcccctgttcctattcttcgtggtgttagacctgttcctgg
2805800
<-----------
RAV1(1)
<---------
ARR11(3)
<---------
ICU4
--------->
ARR14(2)
--------->
YAB1
--------->
ARR11(3)
-------->
HAHB4
<---------
ARR14(2)
<---------
YAB1
<---------
ARR14(3)
--------->
ICU4
------>
ZmHOX2a(1)
--------->
YAB1
------>
ZmHOX2a(2)
--------->
YAB1
<------
MYB83
--------->
ARR14(3)
----------->
GT1
<------
MYB46(1)
<---------
GLK1(1)
<---------
YAB1
------>
ETT(2)
--------->
ARR11(3)
<---------
TOE2(3)
--------->
YAB1
<-------
-----
P
<---------
AtMYB61
<---------
At4g35610
----------->
HVH21
<---------
YAB1
----
=========================
HOX2a_HOX2a
<---------
ATHB12
--------->
YAB1
<---------
ICU4
<---------
AtMYB61
--
ANAC46
<-----------
RAV1(1)
<---------
REM1(1)
--------->
STY1(1)
----------->
GT1
<---------
ATHB51
tagacatccttgtgttggtgatcctgaagatattgtagctactcattcactagggtttctcagtgatgacaaggttaaaaatgataataatggtggtgtt
2805900
Previous
Next
AGI:
At1g08760.1
Description:
similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G13370.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN75715.1); contains InterPro domain Protein of unknown function DUF936, plant (InterPro:IPR010341)
Range:
from: 2805374
to: 2808624
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.