Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                 ------>ZmHOX2a(2)                                                              --------->CCA1(2)                                                              <------ZmHOX2a(2)                                                             <---------AGP1                                                             --------->ARR11(3)                   --------->ANAC46                          --------->ARR14(2)                   --------->ANAC58                          <---------ARR14(2)               <-----------GT1                               <-----------ARR10             <---------AHL20(2)                              <---------ARR11(3)             --------->AHL20(2)                             <---------CCA1(2)                 <------         --------->AHL20(2)                        --------->MYB52(1)                        --------         <---------AHL20(2)                     --------->ANAC46                             <-------  ----------->RAV1(1)                           --------->ANAC55(2)                          <------- --------->MYB46(3)--------->ANAC58           <-----------GT1--------->AGP1            <-----------GT1   acaacaacagattaattaaacaagacatccacaattcgaaattcgatttcacataacgaatcagatctgagtcttcacattcaacattttcacattaacg  2576300                                ------>ZmHOX2a(2)                                ==========================HOX2a_HOX2a                               ===========================HOX2a_HOX2a                               --------->CCA1(2)                               <------ZmHOX2a(2)                              <---------ARR14(2)                              <---------ARR11(3)                              <---------ARR14(3)                              --------->ARR11(3)                                                 ----                              <-----------ARR10                                                  <---                              --------->ARR14(3)                   <---------YAB1               -----                              --------->ARR14(2)                 --------->YAB1                 ----- ---TOE2(3)                   <---------AGP1                  --------->YAB1                   <----- ->MYB52(1)                   --------->AGP1               <---------HSFB2a(2)                ------- --DOF5.7(2)             --------->MYB52(1)                --------->HSFB2a(2)          ------->TEIL ----GT1   --------->MYB52(1)<---------CCA1(2)     ------>ZmHOX2a(1)     <---------TOE2(3)    <------   atttactaagaagaaacgaagaacaaataccagatctgccatcttgatcagtccttcaagtctagaatcatgcttaatgttgatacgatgaaactggatc  2576400   ------>MYB46(1)                       ------>ZmHOX2a(2)   ------>MYB83                        --------->ARR11(3) --------->MYB46(3)                    <---------ARR11(3) --------->AtMYB61                  <----------DOF2 ------->HVH21                     <---------ANAC58 ------ETT(1)                      <---------ANAC58                                            <----- ---->DEAR3(2)                  ------->PIF5              ---------->DOF2      <------ZmHOX2a(1) ->ZmHOX2a(2)                   <-------PIF5  --------->YAB1         ------->TEIL      --------->LBD16 -ZmHOX2a(2)               --------->ANAC58   --------->ATHB12      <---------ARR11(3) <-----------HVH21 -->ARR14(2)               --------->ANAC46   <---------ICU4      --------->ANAC58    --------->ANAC46 ---ARR14(2)               --------->ANAC58  <---------YAB1       --------->ANAC58--------->ATERF1(1)   cgaccagcccattgaacggtatcaggctcaagcaagtgcttgatcttatcattgtaaacatcaagcgcaagaaccttgtgaggagtctccgtcataagct  2576500                                       --------->AtLEC2                                    <---------ATHB12                                 --------->DEAR3(1)                                        ------>NtERF2                                <------NtERF2                                <------ZmHOX2a(2)   ----                               ------>NtERF2                                <---------ARR11(3)   ----                              --------->DEAR3(1)                            <---------ARR14(2)  -----                              <---------ALFIN1                              --------->ARR14(2) <-----                            ------>NtERF2          <---------At4g35610      --------->AGP1--------->ARR14(2)                            <-----------HVH21  <-----------TGA1          <---------HSFB2a(2)  <------                            <---------ATERF1(1)<-----------HVH21      <---------SPL7      <---------ARR14(2)                            --------->LBD16 --------->ARR14(2)     <---------At5g28300   --------->At4g35610                           --------->ANAC46 <---------ARR14(2)    <-----------GT1    --------->MYB52(1)      --------->CCA1(2)   <---------LBD16  <---------CCA1(2)    <----------DOF2   <---------ATHB12 ----GLK1(2)      <---------ATHB12  <------ZmHOX2a(2)   <----------DOF2  --------->HSFB2a(2)<------NtERF2   tctcacagagatgagagccaatgaaacctccggcaccgatcatgcatatcgtcatcggcttaatcggtttaccgtccagatccaatctatcggctccgtt  2576600                               --------->ARR11(3)                               <---------ARR11(3)                            ----------------------->TaNAC69(2)                           --------->ANAC55(2)                         --------->ANAC46                    --------->ZAT14                 <---------DEAR3(2)                <---------DREB2C(2)                <---------At1g77200                <---------ANAC46         >>>>>>>>>ARR2   --------->ANAC58       <---------YAB1 <---------REM1(2) ----->ANAC58   <---------DEAR4(1)       --------->ANAC58 ----->ANAC58   --------->ETT(1)         --------->ANAC58        --------->ALFIN1 ---->SPL7      <---------DEAR3(1)    ----------->HVH21        <---------ANAC46                  ---- ----MYB52(1)<-----------RAV1(1) ------>ZmHOX2a(2)      <<<<<<<<<<<<<<<<<LFY                 -------- ---SPL7--------->ATHB12 --------->ANAC58--------->ANAC46     <---------MYB46(3)          <----------ARF1   cgccatattttgattgtgtcggtgaacacgcgtgatctctctcacgcttctacagagataacaatgggtggaagagagatttgtgagaatgggagaaaag  2576700                                                                                          <---------TOE2(3)                                                                                 ------->PIF5                                                                                 <-------MYC3                                                                                 <-------MYC2                                                                                 ------->MYC2                                                                                 <-------PIF5                             <---------ANAC58                                    ------->MYC3                             <---------ANAC46                                   --------->O2                             <---------ANAC58                                   --------->ANAC46                             ----------->GT1   --------->ZAT14                  --------->TGA1a                        ---------->DOF2        <---------ZAT14                  <---------ANAC55(2)                     <-----------TBP --------->YAB1                             <---------TGA1a                   <---------CCA1(1) <---------ICU4                             <---------O2      --------->CCA1(2)<---------AHL20(2)      <---------REM1(2)           <---------ALFIN1 ---------->DOF2   <---------RVE1(1)--------->ICU4            --------->AtLEC2<---------ALFIN1 ------>DOF2 --------->CCA1(2)     <---------AHL20(2)----------------------->TaNAC69(2) <---------AHL20(2) -->DOF2   *TSS ----------->GT1   --------->YAB1<---------ALFIN1           --------->ANAC46        <-   aaagaaagaaatgagagatggatatttaaaggcgtataataatgttccctacactctcacagccttgcacattactcccaccacgtgaaattaatgtttt  2576800                                        <---------At4g35610          --------->ARR14(2)            --------->At4g35610          <---------GLK1(2)         ------->TEIL          <---------ARR14(2)        --------->ARR14(2)     <-----------HVH21              <---------ARR14(2)  --------->O2                   <---------YAB1      ------->MYC3  <---------ANAC55(2)          --------->YAB1        <-------MYC3  <---------O2                <---------YAB1        --------->TGA1a  --------->ANAC55(2)       --------->YAB1          --------->ANAC46  <---------ANAC58          -------->ATHB1          <---------ANAC55(2)  --------->TGA1a           <--------HAHB4          <---------O2  <---------ANAC58          --------->ATHB51        <---------ANAC46  <---------ANAC46          <---------ICU4          --------->O2  <---------TGA1a          <---------ATHB51         <---------TGA1a  --------->ZAT6  <---------ANAC55(1)      <---------ATHB12         --------->ANAC55(2)                      <xxxxxxx  <---------bZIP60(2)      --------->ICU4 <---------YAB1 --------->GLK1(1)             --------->ZAT14 --------MYB52(1)        --------->WOX13(1)  <---------WOX13(1)  <---------AHL20(2)    <---------ZAT14   cgttacgtgtcatattctctcttaagtcaattattatgaatctgctgattgttcacgtgaaatctattttaaaactagtagattacaactacagtatata  2576900                                    <---------DDF1                                   --------->DEAR3(1)                    <---------ZAT6                                   --------->DREB2C(2)              <----------DOF2                      <-----------RAV1(1)                         <------NtERF2                      <---------MYB46(3)                         ------>NtERF2                      --------->MYB52(2)----------->GT1          --------->ABI4(2)                  <---------YAB1   --------->DEAR4(1)          --------->ATERF1(1)          ---------              <---------ANAC58     --------->At1g77200         <-------GAMYB            <-------TEIL              <---------ANAC58    --------->DEAR3(2)          <---------MYB46(3)       <--------P      <---------AHL20(2)    <----------DOF2                   <---------DEAR3(2)     ----------->GT1     <---------AHL20(1)    <---------ANAC58                  <---------DREB2C(2)     <---------MYB46(3)     <---------AHL20(2) ---------->ID1  --------->AtLEC2     <---------DEAR3(1)    <------ZmHOX2a(1)     --------->AHL20(2)<-------GAMYB----------->RAV1(1)      <---------At1g77200--------->CCA1(2) xxxxxxxxxxxxxsmallRNA(si3)<---------ANAC58                <-----------HVH21<--------P<-------GAMYB   gtttcaatttttttttgggtatgtttgttgctttacaccgacatgtaaaattgtgctaattcgtcggtggccttagtggtagataggaggttgattaaac  2577000                          --------->ANAC58                          --------->ANAC58                      ----------->GT1                      <------MYB46(1)                      <------MYB83                     <---------MYB46(3)                     --------->MYB55(2)                  --------->ALFIN1                                                   <---------ICU4                  <---------ANAC58                                                   --------->ATHB51                  <------MYB83                                                      <---------YAB1                  <------MYB46(1)                                                   --------->ICU4                  <---------ANAC46                                                --------->TOE2(3)                  <---------ANAC58                                                --------->YAB1                 <---------MYB46(3)                                               <---------------AGL15                 <---------DEAR3(1)                                               --------->TOE1(3)                 --------->MYB111(2)                                              --------------->AGL15                 --------->MYB55(2)              --------->AHL20(2)              <---------ATHB12                 --------->MYB111(1)             <---------AHL20(2)              --------->MYB46(3)                --------->ALFIN1                --------->AHL20(2)               ----------------->AGL3                <---------MYB55(1)              <---------AHL20(2)               <-----------------AGL3                <---------ANAC46            <---------YAB1 --------->AHL20(2)    <-----------------AGL2              <---------MYB46(3)   <---------AHL20(2)      --------->YAB1       -------->P    <------             <---------AtMYB61     --------->AHL20(2)  <---------YAB1           ------>MYB46(1)         <---------ZAT14<--------P --------->AHL20(1)<-----------GT1            ------>MYB83  <------  --------->CCA1(2) --------->ALFIN1      <---------ZAT6--------->YAB1  ---------->DOF2       <------ >AHL20(2)   --------->ALFIN1  --------->ICU4----------->GT1      --------->At4g35610--------->ATHB12   agagaaacgagagaagtggtgggtgggtaagtaagaattaattagtgtgattaaattacaataatataagcttacaaagtccaaccataattggtggagt  2577100                               --------->DAG2                 --------->ANAC55(1)                              --------->DAG2                  --------->ANAC55(2)                             ---------->DOF2                  --------->ANAC58                 <-----                        --------->ANAC58                      ----------->GT1             --------->SPL7                        --------->ANAC58                      --------->ANAC58           --------->ARR14(2)     ---------->DOF2--------->CCA1(2)   --------->ANAC58      <---------ANAC55(2)        <---------ARR14(2) ---ANAC58       --------->ANAC58       --------->ANAC58      --------->ANAC46  <-----------GT1<----- ---ANAC46       --------->ANAC46  --------->ZAT18     ----------->GT1        <---------AHL20(2) ---ANAC58       --------->ANAC58 --------->ALFIN1     <---------REM1(1)     --------->YAB1--------->MYB46(3)   gaatgctaaaagctactacaagaaacgagcaaaaaggtggacaaggaagactactagttgtaacaagtaataacttctattaaaactctccgaaccgctt  2577200  Previous    Next  AGI:  At1g08200.1    Description:  AXS2 (UDP-D-APIOSE/UDP-D-XYLOSE SYNTHASE 2). similar to AXS1 (UDP-D-APIOSE/UDP-D-XYLOSE SYNTHASE 1) [Arabidopsis thaliana] (TAIR:AT2G27860.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43127.1); similar to unknown [Populus trichocarpa] (GB:ABK94776.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16707.1); contains InterPro domain NAD-dependent epimerase/dehydratase; (InterPro:IPR001509); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040) Range:  from: 2573845    to: 2576711    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g08210.1    Description:  aspartyl protease family protein. similar to aspartyl protease family protein [Arabidopsis thaliana] (TAIR:AT5G22850.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62959.1); contains InterPro domain Peptidase aspartic, catalytic; (InterPro:IPR009007); contains InterPro domain Peptidase A1; (InterPro:IPR001461) Range:  from: 2577017    to: 2580666    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.