Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                        <---------ZAT14                                                      --------->ZAT14                                                      <---------ETT(2)                          --------->ANAC46            --------->ETT(2)                          --------->ANAC58      --------->GLK1(2)                ------>MYB83        --------->YAB1    --------->ANAC58      <-----------ARR10                --------->ANAC58       <-------TEIL     --------->MYB52(1)      <---------ARR14(2)               ------>MYB46(1) --------->DOF5.7(1) --------->TOE2(3)          --------->ARR14(2)               --------->ANAC58 -------->DOF2      --------->YAB1              <---------ARR11(2)       --------->At4g35610 ----->ANAC58     --------->MYB52(1)            --------->ARR11(2)       <---------At4g35610 ----->ANAC58   <---------MYB52(2)              --------->RVE1(2) <---------ANAC46<---------ATHB12   agaaagagattcataaaaactaacataaacggaattgtccagagttgaagtatctgtccacagaggtttctggtgatcagaccaagcatcgataacttct  2164800                                                                                                    <               <-----------HVH21                     --------->KAN4(2)                             <-             --------->At4g35610                 <---------At4g35610                               --             <---------At4g35610                 <------NtERF2                                   <---          <-------TEIL                          ------>NtERF2                                    ----        --------->ARR14(2)                      <---------DEAR3(2)                               ----        <---------GLK1(2)                     <---------MYB52(1)                                 <---        --------->GATA12                 --------->GLK1(2)                              <---------ICU4        <---------GATA12             --------->YAB1 --------->KAN1                      -------------        <---------ARR14(2)       ---------->ID1<---------DEAR3(1)                       --------->YAB5 <---------MYB46(3)          <----------DOF2 <-----------HVH21                          -------------   tgatggttcagattcagcttcagacccaagtctttgtcttcataatccgtcggcttattctcccaaaacccaaaacttgagccttcttgatcagtactcg  2164900                                                     <-------MYC2                                                     <-------MYC3                                                     ------->MYC3                                                     ------->MYC2                                                     <-------PIF5                                                     <-----------HVH21                                                     ------->PIF5                                                    --------->TGA1a                                                    =======================bZIP_DOF                                                    --------->bZIP60(2)                                                    <---------TGA1a        <<<<<<<<<TBF1                               <---------O2    <-----------GT1                                 --------->ANAC46 ----------DOF2                                     --------->O2 --------DOF5.7(1)                                  =================MYC_MYB ---->ZmHOX2a(2)                             --------->KAN1           <---------At4g35610 ------GATA12                                --------->GLK1(1)        --------->At4g35610 ----->ARR11(3)                              <---------GLK1(1)  ---------->DOF2 ----->GATA12      <---------ARR11(3)     --------->LBD16     <---------MYB52(1)     --------->YAB1 ------ARR11(3)    --------->GATA12      --------->HSFB2a(2) <-------GAMYB  --------->WOX13(2) -->AtSPL8        --------->REM1(1)      <---------HSFB2a(2)--------->MYB52(2)  <---------YAB1   ---- -->AtSPL3      <---------ALFIN1---------->ID1    <---------ALFIN1 <---------At4g35610    <---------bZIP60(1)   atcttttttcttcttcccctacatcttcatcttcgtcttcttcccagaaatcccacgtgagttcgttagagcagcttaaattgtcaatggtgatgtcgaa  2165000                                <------MYB83                                <------MYB46(1)                               <---------AtMYB61                       <--------ATHB1                                                            <<<<                      <---------YAB5                                                          <<<<<<<                      <---------YAB1                                                       <<<<<<<<<TBF1                      <---------KAN1                          <---------TOE2(3)    ------>ZmHOX2a(2)          <---------ATHB12  <-----------RAV1(1)               <---------TOE1(3)  --------->ARR11(3)    --------->HSFB2a(2)--------->ATHB12                       <---------TOE2(2)  <---------RVE1(2)    <---------HSFB2a(2)--------->YAB5                <---------WOX13(1)---------->DOF2  <<<<<<<<<TBF1 ----->KAN1           --------->ICU4          <---------YAB1  <---------TOE1(2)  <---------ARR11(3)   aatgctctcgaaatcatctatagaatgattgtgttggtctcgagagtgaccattgatggactcgaaggttgaagaaagtagatgatcttcttcttcttct  2165100                                                                             <---------AHL12(3)                                                                             <---------AHL20(2)                                                                             <---------AHL25(2)                                                                             <---------AHL25(1)                                                                             <---------AHL20(3)                                                                             --------->AHL12(3)                                                                             --------->AHL20(3)                                                                           --------->AHL12(3)                                                                           --------->AHL25(2)                                                                           <---------AHL12(2)                                                                           --------->AHL12(2)    <---                                                                           <---------AHL25(2)    <---                                                                           <---------AHL12(3)   -----                               --------->ARR11(3)                         <---------AHL20(1)    <----                       <---------ARR11(2)                                 <---------AHL12(1)    -----                       ------->TEIL                                       --------->AHL12(1) --------                       --------->ARR11(2)                                 --------->AHL20(3) --------                       --------->ARR14(2)                                 <---------AHL25(2) <-------                       --------->RVE1(2)                                  --------->AHL20(1) <-------                <----------DOF2<---------ARR11(3)                  --------->ANAC46          --------               <---------DOF5.7(1)            <-----------GT1    <---------ALFIN1            <-------  <----------DOF2      <---------ARR14(2)<----------DOF2        --------->ZAT14       <----------DOF2 <---------DOF5.7(1)  <---------CCA1(2) <------------------------ANAC81   <---------ARR11(3)<-------- <<<<<TBF1     --------->TOE2(3)     <---------CCA1(2)         <-----------HVH21   <-----------GT1 <<TBF1  --------->HSFB2a(2)  <---------CCA1(2)    <---------MYB52(1)     --------->AHL25(2)---------   tcttctttcttcggcaacctttgtgtatccatatatctcttatctttttctctgttttgttttcccttcactccaatattttttttttctttgtaaatcc  2165200      --------->ANAC58      --------->ANAC46 --------HVH21 --------TGA1 ---->ANAC46                                                                           <---------TOE1(1) -----ANAC55(2)                                                                     <---------ARR11(2) ---->ANAC55(2)                 <---------------AGL15                       --------->TGA2(1) ->ARR14(2)             <-------TEIL                                        <---------TGA2(1) ->ARR11(2)  <---------------AGL15                                          <---------REM1(1) --ARR14(2)  --------------->AGL15                              --------->TOE2(3)   --------->ARR11(2) --GATA12   ----------------->AGL2                              <----------DOF2------->TEIL ->GATA12   ----------------->AGL3                      <----------DOF2--------->ANAC55(2) --ARR11(2) <-----------------AGL3    *TSS              --------->TOE2(3)   <---------bZIP60(1)   <-- -GLK1(1)   ====================================MADS_MADS  --------->YAB1   --------->bZIP60(1)  <--- >KAN1--------->ANAC58 --------->CCA1(2)          --------->ALFIN1     <---------ANAC55(2)<---------bZIP60(2)   gtcaccatacgaaaactatatatagatacaaatacaatatttagagagcaaggtgtttctttaatactttaatatgtgatgtaactgatacgatgtggca  2165300                                <------------CBF                               --------->ATHB12                              <---------YAB1                    --------->KAN4(2)                   <---------KAN1  <------MYB83                   --------->KAN1<---------WOX13(1)       ----------------->AGL3                   <---------KAN4(1)                      <---------MYB59        --------->DAG2      <---------At4g35610          --------->ANAC58       ---------->DOF2      <---------ZAT2               --------->ANAC58   <---------DOF5.7(1)  ---- -------DOF5.7(1)  --------->KAN4(1)              --------->ZAT2     <---------PCF2    <----------DOF2 ------At4g35610  <---------KAN4(2)<------MYB46(1)<---------ZAT2     <---------PCF5    ------>ZmHOX2a(1)   tcttatcccaaaagtgatggaataatctcaagctgattggtttagagagtccagcttggacccaatttgagggacctctcttactggtcctttgcctcta  2165400                                                                                       <---------AHL12(2)                                                                                      <---------AHL25(2)                                                                                      <---------AHL25(1)                                                                                      <---------AHL20(2)                           <----------DOF2             <------------CBF               --------->AHL12(3)                          <---------DOF5.7(1)         --------->ATHB12                <---------AHL12(3)                     <-----------GT1                 <---------YAB5                   --------->AHL20(3)                  <---------DOF5.7(1)               <-----------TGA1           --------->ZAT6                 <---------DOF5.7(1)                <-----------HVH21        --------->YAB1                 <---------DAG2                    <---------ANAC58  --------->DOF5.7(1)                 <----------DOF2    ---------->DOF2<---------ANAC58---------->DOF2    <---------AHL20(3) ---->P    <-----------GT1<---------ICU4        ------>ZmHOX2a(1) <------ZmHOX2a(1)  --------->AHL20(2)   accagagaccatttagccacttttttcatctttatactaatagccgagtcctagcgtcattggggctaggaaagagctataacagtataaaatttccctg  2165500                                                                                             --------                                                                                             --------                                                                                            ---------                                                                                          <---------RAP2.6(3)                                --------->RVE1(2)                                        --------->RAP2.6(2)                                --------->ARR11(3)              --------->ARR11(3)      <xxxxxxxxxxxx                  <---------ANAC46                      <---------GLK1(2)               <xxxxxxxxxxxx                  <---------ANAC58     <---------WOX13(2)      --------->REM1(1)       --------->At4g35610                  <---------ANAC58     --------->WOX13(2)--------->GLK1(2)    <------ZmHOX2a(1)         --------->GLK1(1)      <---------ARR11(3)    ----------->ARR10    xxxxxxxxxxxxxxxxxxxx>smallRNA(le3) <<<<<<<<<TBF1  *TSS       ---------->DOF2          <---------KAN1        --------->DOF5.7(1)<-------   ttcttcttcagaattcattttcttgtattcaaagtatcttaagttaagaagagaataagattcttacatcttgatgaagaggaatgggaagccgaaatct  2165600                      <---------ATHB12                                       ------>ZmHOX2a(1)                      --------->ICU4                                         xxxxxxxxxxxxxxxxxxxx>smallRNA(l2)                     --------->WOX13(2)                                   xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                     <---------WOX13(2)                                   xxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                 --------->ANAC58                                   xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                 --------->ANAC58                                   <----------DOF2              <------NtERF2                                        <---------DOF5.7(1)              --------->ATERF1(1)                      =============================HOX2a_HOX2a -----             <-----------HVH21                         ------>ZmHOX2a(2)  xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)             <-----------TGA1                        <---------ARR11(2)   xxxxxxxxxxxxxxxxxxxx>smallRNA(s2)             <---------ATERF1(1)                     <---------RVE1(2)    xxxxxxxxxxxxxxxxxxxx>smallRNA(le3) ->RVE1(2)  <---------bZIP60(1)                      --------->GATA12     XXXXXXXXXXXXXXXXXXXX>MIR847 ->GATA12   --------->bZIP60(1)          --------->ARR11(3)       <xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) >GLK1(1)   <---------ANAC58             --------->RVE1(2)       ------>NtERF2<---------DOF5.7(1)<--- xxxxxxxxxsmallRNA(si3)  <---------YAB1  <---------ARR11(3)------->TEIL  --------->ANAC46<---------REM1(1) xxxxxxxxxsmallRNA(le3)--------->YAB1   --------->GLK1(1) <---------CCA1(2) xxxxxxxxxxxxxxxxxxxx>smallRNA(se3) --GATA12   <---------ANAC58     <--------P          <---------GATA12  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)   aaactgaaacagaggcgtcacccaattatcaattggtaagtgatatctatgtttcgatctgtatctcggcctttcactcctcttcttcttgatgtaagaa  2165700  Previous    Next  AGI:  At1g07050.1    Description:  CONSTANS-like protein-related. similar to CIL [Arabidopsis thaliana] (TAIR:AT4G25990.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21391.1); contains InterPro domain CCT (InterPro:IPR010402) Range:  from: 2164187    to: 2165238    Orientation: Reverse Links:  TAIR  MIPS  AIP    AGI:  At1g07051.1    Description:  MIR847a; miRNA Range:  from: 2165516    to: 2165745    Orientation: Forward Links:  TAIR  MIPS  AIP      Please cite the corresponding publications when using AthaMap.