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   Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                          --------->ANAC46
                                                          --------->ANAC58
                                                          --------->ANAC58
                                                      --------->ANAC58
          <---------ALFIN1                            --------->ANAC46                       -------
        ----------->RAV1(1)                           --------->ANAC58         --------->LBD16
  <---------WOX13(1)                             <---------ICU4               <-----------RAV1(2)
--------->ATHB12                                 --------->YAB1              --------->LBD16<-------
---------YAB1                                   <---------YAB1              ----------->RAV1(1) ----
-------DOF2                                   --------->YAB1        --------->LBD16         <<<<<<<<
-----ANAC58                                   <---------ICU4  --------->ANAC58<---------HSFB2a(2)
-----ANAC58--------------------->WRI1    --------->AHL20(2)   --------->ANAC58--------->HSFB2a(2)---
 
ttttgattggccaacactcttcgcatcgacttcacatgaaaaaaaaaaatcatcataacgcaagcaagtcccccaaaacccccagaagaaacacaatcaa  1501400
                                                                    --------->MYB52(1)  --------->AtMYB61
                                                             --------->WOX13(1)      --------->ANAC46
                                                     --------->TOE2(3)              ------>MYB46(1)
                                                     --------->TOE1(2)              ------>MYB83
-->YAB1                                              --------->TOE1(3) ------->GAMYB-------->P   <--
--ATHB12                                           ------->TEIL    --------->MYB46(3)<---------ALFIN1
------>DOF2                                  ------>MYB46(1)<-------TEIL          --------->AtMYB61
<ARR2                                        ------>MYB83  <------ZmHOX2a(2)     --------->MYB46(3)
------>DAG2                           <-----------HVH21   --------->AGP1 --------->ALFIN1        <--
 
aaagtttcaaaattagtcagtacccatgaaattgttcccaaggtcaccaaattgaaccttagatccatcaacaacggtgatgctaccaacaccaccaagt  1501500
                                                                                    --------->ANAC46
                                                                                 ------>MYB46(1)
                                                                               --------->AtMYB61
                                                                               <---------MYB111(1)
                                                                             -------->P
                                                                             ------>MYB46(1)
                                                                             ------>MYB83--------->ARR14(2)
                                                                            --------->MYB55(1)
                  --------->ARR14(2)                                       <---------MYB46(2)     --
               --------->ANAC58                                            <---------MYB59      <---
        ---------->DOF2                        <---------ARR14(2)       <---------WRKY18(1)---------
  --------->GLK1(2)                            <---------GLK1(2)       ----------->HVH21 <---------ARR14(2)
 <---------GLK1(2)<---------ARR14(2)           --------->ARR14(2)     <----------DOF2 <---------ALFIN1
-------TOE1(1) --------->ANAC58          <---------ZAT14            <------NtERF2------>MYB83------>ZmHOX2a(1)
-------TOE2(1)<---------LBD16 ----------->RAV1(1)                 <---------RAP2.6(2)--------->LBD16
 
acgagattcttcaaagcctcggaaccagtagggccacaattgagtaaacagatactcgcttcttccaaggccgcttgacctacctccccccaaatcctaa  1501600
         <---------ATHB12
       ------>MYB83
       --------->MYB52(1)
       ------>MYB46(1)
     --------->MYB46(3)                                                                          ---
     <---------MYB55(2)                                                                         <---
     ------->GAMYB                                                                         ---------
    --------->ANAC46                                                                      ----------
 <---------WRKY12                    ------>NtERF2                   ---------->DOF2    --------->ZAT2
 <---------WRKY38(1)                <---------ETT(1)              ==================================
--------->WRKY18(1)                 --------->ANAC46              <------ZmHOX2a(1)     --------->At4g35610
------->WOX13(1)                    --------->LBD16             <---------TOE1(3)       <---------At4g35610
------ATHB12                     ------>ZmHOX2a(1)              <---------TOE2(3)       <---------ZAT2
-------->AG                  <-----------GT1              <---------ZAT6           ----------->RAV1(2)
 
tcagtcaacccaacgattactacttcatcaattttcctcccgacaagagtagttcgaagtagagtttaaggaaaaagagtatgtatacctgagctgacga  1501700
                                                               <---------ANAC46
                                                           <---------At5g28300
                                                          <-----------GT1
                                                      <----------DOF2
                                                     ------>ZmHOX2a(2)
                                                   <---------AGP1
                                                   <---------ARR14(2)
                                                   --------->ARR11(3)
                                                   <---------ARR11(3)
                                                   --------->ARR14(2)        <---------At4g35610
                                                  <---------CCA1(2)          <---------ZAT2
          <---------TOE1(3)                     --------->HSFB2a(2)          --------->ZAT2
--->ZmHOX2a(2)                                  <---------HSFB2a(2)          --------->At4g35610
---ZmHOX2a(2)         <-----------RAV1(1)       --------->LBD16<---------ANAC58
>MYB52(1) --------->MYB59                       ------>ZmHOX2a(1)        --------->ANAC46
->HVH21   <---------TOE2(3)                    <---------LBD16 <---------ANAC58   --------->ANAC58
===HOX2a_HOX2a   >>>>>>>>>>>>>>>>>LFY         ----------->RAV1(2)   ------->TEIL  --------->ANAC58
 
tcgtacttggttttaggttctaccattgttggctcttcttcaacatgtctcctggatctttttactgcttgcatcttcgcagctcaagcgagagacgatt  1501800
            ----------->GT1                                                    <------ZmHOX2a(1)
          <---------At4g35610                                       <------------CBF
         <-----------------------TaNAC69(2)                       <---------AHL20(1)
        --------->ZAT14                                           <---------AHL20(2)
        <---------ZAT14                                           --------->AHL20(2)
     --------->LBD16                                              --------->AHL20(1)
   <---------LBD16                     --------->YAB1          <---------ARR11(3)
   <-----------RAV1(2)              --------->WOX13(1)         <---------AHL20(1)                 --
  ------>NtERF2                   ------------>CBF             --------->AHL20(1)    <-----------GT1
<---------ANAC58      ---------->DOF2 <---------ATHB12         --------->ARR11(3)   <---------AHL20(2)
<---------ANAC58      *TSS  <----------DOF2                --------->LBD16   <---------TOE2(3)   ---
 
tttgcctccggtgaactgataaacaaaaagacttttcttcaatcagggtttttgtttatttccgaatattttattgtttttaggaaatttatcgtttgaa  1501900
                                                                                                <---
                                                                                                ----
                                <-----------ARR10                                   <---------AHL20(2)
                                <---------ARR11(3)                               --------->AHL20(1)
           ------>MYB83         --------->ARR11(3)       --------->ANAC46        <---------AHL20(1)
           ------>MYB46(1)     --------->CCA1(1)         --------->ANAC58        <---------ARR11(3)
         <---------MYB59       --------->RVE1(1)         --------->ANAC58        --------->ARR11(3)
       -------->P         --------->YAB1       --------->AHL20(2)               <---------AHL20(2)
------->DAG2  <---------AHL20(2)--------->AHL20(1) <---------AHL20(2)          --------->ICU4   ----
------->DOF2  --------->AHL20(2)<---------AHL20(1) --------->AHL20(2)     ----------->GT1      -----
 
aaaagttatctaccaaattaaaaaatcgatattaatatcttactgattttttatatatataagcaaataagaaaattttgtaaatattttttttaaaaaa  1502000
                                <---------KAN4(2)
                               --------->YAB1
                            --------->YAB1
                     --------->ANAC46       --------->ARR11(3)
       ------------------------>ANAC81      <---------ARR11(3)
      ---------->DOF2--------->ANAC58      --------->YAB1                  <---------YAB1
----------->GT1      --------->ANAC58     <---------YAB1                 --------->YAB1
------AHL20(2)   --------->CCA1(2)   --------->YAB1                      <--------HAHB4
----->AHL20(1)  <---------ARR11(3)<---------ICU4                        <---------YAB1 <------ZmHOX2a(1)
----->AHL20(2)  --------->ARR11(3)--------->YAB1               <-----------GT1   <---------YAB1  <--
---->AHL20(2)   <-----------ARR10--------->KAN4(1)         <---------AHL20(2) <---------YAB1 <------
 
aaattgtgaaaaagaagaagatataagcaaataagaataatcaccatgatattgttttttgttttatttccgactattattattcttataggaaattttc  1502100
                                                <---------ZAT6
                   ------>MYB46(1)       --------->ARR11(3)
                   ------>MYB83          --------->AHL20(1)
                 <---------MYB59  <---------RVE1(1)
                 --------------->AGL15   <---------ARR11(3)
                 <---------------AGL15   <-----------ARR10
                ----------------->AGL3  --------->RVE1(1)
      --------->DAG2             <---------ARR11(3)                                              ---
     ---------->DOF2    <---------TOE2(3)<---------AHL20(1)      --------->CCA1(2)         ---------
-------MYB52(1) ----------------->AGL1  --------->CCA1(1)      <<<<<<<<<RAP2.2       ----------->GT1
-----GT1       -------->P        --------->ARR11(3)  <---------YAB1    --------->AHL20(2)  <--------
 
gttttttaaaaagttatctaccaaattaagaatacagatattaatatcttactgttacgattttttagatataagaaaataagaaaatttgtaattaaaa  1502200
                                                                     <------MYB46(1)
                                                                     <------MYB83
                                                                    --------->MYB59
                                                       --------->ARR14(2)
                                                   <-----------------AG
                                             <---------YAB1     <------MYB83  <---------TOE2(3)
                                            <---------ARR11(3)  <------MYB46(1)----------->GT1
                                          <---------YAB1       <---------AtMYB61    --------->YAB1
------->DOF2   <---------AHL20(2)         --------->ICU4      <---------WOX13(1)<------ZmHOX2a(1)
>AHL20(2)      --------->AHL20(2)       --------->YAB1 <---------ARR14(2)    --------->YAB1
-AHL20(2)  --------->AHL20(2)         -------->P   ---------->ID1   <---------AtMYB61
 
aaaagaagaatagattaaaaaattgttttaaaaagtttatctaccatgatttttgtccgatttggattggtttggttcaataaggaaacataacaataga  1502300
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AGI:  At1g05180.1   
Description:  AXR1 (AUXIN RESISTANT 1); small protein activating enzyme. Identical to NEDD8-activating enzyme E1 regulatory subunit (AXR1) [Arabidopsis Thaliana] (GB:P42744); similar to AXL (AXR1-LIKE), catalytic [Arabidopsis thaliana] (TAIR:AT2G32410.1); similar to AXL (AXR1-LIKE), catalytic [Arabidopsis thaliana] (TAIR:AT2G32410.2); similar to auxin resistant 1 [Brassica rapa] (GB:ABV89645.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23995.1); similar to putative ubiquitin-activating enzyme (alternative splicing product) [Oryza sativa (japonica cultivar-group)] (GB:AAO65877.1); contains InterPro domain UBA/THIF-type NAD/FAD binding fol
Range:  from: 1498113    to: 1501823    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.