Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                 <-----                                                                                               ------                                                                                               <-----                                                                                               ------                                          ----------->RAV1(2)                                <-------                                      <---------ARR11(3)                                 ------>NtERF2             <---------LBD16    <---------YAB1                                        <-------PIF5          ------->TEIL     ----------->RAV1(2)                                        --------->LBD16         <---------GLK1(2)--------->GLK1(2)      <------NtERF2                        ------->PIF5 --     --------->At4g35610  ------->TEIL--------->ARR11(3)                             <---------O2 <--     --------->LBD16     <---------ARR14(2)     ------>NtERF2                        --------->O2 ---     <---------At4g35610 --------->ARR11(3)    <---------ETT(2)                     <---------LBD16--   --------->MYB46(3)    --------->ARR14(2)    --------->ETT(2)   --------->GLK1(2)<---------ALFIN1--   ttgcatccgctgaatctcggaatagaagaacctgatgagagctcttctggcgacaacttcggcatgagaatcgttcacaatgtccccacggggactcagc  278200           <---------ZAT18           ------->GAMYB        ---------->DOF2        --------->MYB52(1)      <---------MYB52(2)     ------>MYB46(1)     ------>MYB83   --------->MYB46(3) --------->PCF2 ----At4g35610                                     --------->ZAT18 --->ZAT2 --------->ANAC58      --------->ANAC58   --------->ZAT14 ----ZAT2 --------->ANAC58      --------->ZAT6 --------->ARR14(2) --->At4g35610                  --------->ANAC58   <---------ZAT14 ----RAV1(2) ------->TEIL     --------->MYB52(1)   --------->At4g35610 ------->MYB46(3)       <-----------HVH21      <---------ARR14(2)                                  -- -------At4g35610      --------->DEAR3(1)   <---------ANAC46        --------->At4g35610     --------- ------>At4g35610      --------->ANAC46     <---------ANAC58  <---------YAB1               ---------- --------->HVH21      <------NtERF2         <---------ANAC58  ------>ZmHOX2a(1)         --------->YAB1 ------->DEAR3(1)  --------->PCF5        <----------DOF2  <---------ARR11(3)      >>>>>>>>>MYB2 -----   agcgacccactaacgcacttggtccccgtccctaacgctatcactttcgggtctgcacaaaatcctaattagctctaaatcgaaaaccaaaaataaagca  278300                                                           --------->ANAC46                                                           --------->ANAC58                                                           <---------O2                                                           --------->O2                                                           <---------TGA1a                                                           --------->TGA1a                                                           --------->ANAC58                                                      --------->bZIP60(1)                                                 ----------->GT1                                                <---------DEAR3(1)                                               <---------ORA47(1)                                              ----------------------->TaNAC69(2)   <---------HSFB2a(2)  ----------->HVH21                ---------->DOF2--------->At5g28300              --------->HSFB2a(2) ------->DAG2                      ==================================bZIP_DOF    <---------LBD16 >DAG2    <---------ARR11(3)      <------ZmHOX2a(1)   <---------bZIP60(1)<-----------GT1            - >DOF2    --------->ARR11(3)--------->CCA1(2) <------ZmHOX2a(1)    <---------TOE2(3)      <---------- ----->DOF2          <------ZmHOX2a(1)       ----------->HVH21 ----------->RAV1(2)<---------LBD16 ---   aagagtgacagagaccttgggaaggagaagagacgaggaaagcggagaggacggtgacttcacgtccctgaggttttcccttcttcgggagagacatgta  278400                                     ------>ZmHOX2a(1)                                  <---------ATHB12      <-----------GT1            --------->ARR14(2)                              --------->YAB1 <---------RAP2.6(3)             <---------ARR14(2)                         <-------TEIL -------->RAP2.6(2)            <---------ALFIN1                        <---------MYB52(1) -------------TaNAC69(2)      --------->LBD16     <---------YAB1      <-------GAMYB             ----- ------>At4g35610        <----------DOF2------>ZmHOX2a(1)             <---------At4g35610      ------   agccgaaataaccttctctgatactgtctttccccaatcctcctccattgctacgattcccacaaacaagtccgttgattcattcatgctactcaaaaaa  278500              --------->LBD16                                                  --------->YAB1             --------->ANAC58                                           <---------TOE2(3)             --------->ANAC58                                          ---------->DOF2            <---------LBD16                                          <---------YAB1          <---------ARR14(2)                                       <---------ICU4         <------ZmHOX2a(1)                                        <---------YAB1    <-------TEIL                                                  <---------AHL20(2)  <---------ARR14(2)                                              --------->ICU4                 ----  --------->ARR14(2)                                              --------->AHL20(2)             ---- ---->DAG2--------->PCF2----------->GT1             ----------->TBP-------->ATHB1     ------------>CBF ---->DOF2--------->ARR14(2)              ------>ZmHOX2a(2)       --------->AHL20(1) <<<<<<<<<<<<<<<<   agcagattcaaggacccgcatgaaaatagttataagtttagggatcgttttagtatatatactacaaaattattaaagtaatcaaaatcccaatgggata  278600                                                                               ----------->HVH21                                  <---------O2                               ------>ZmHOX2a(1)                                  --------->ANAC58                          --------->TOE1(2)                 <-----------TGA1 --------->O2                              --------->TOE2(2)                 <-----------HVH21--------->ANAC58                        <---------ATHB12                --------->ANAC46  --------->ANAC55(2)                    ------>MYB83 --------->O2                <---------ANAC58  --------->TGA1a                        ------>MYB46(1)   <----------DOF2<---------MYB52(1)                                     <---------ARR14(2)   =========================================bZIP_DOF                  --------->MYB46(3)  <----------   --------->TOE2(3)              --------->ANAC46                  --------->MYB52(1)<---------O2 ----->ANAC58   <---------ANAC58  <---------TGA1a                 <---------MYB59  ------>ZmHOX2a(2) ----->ANAC58   --------->ANAC55(2)                         ------>ZmHOX2a(1)=============HOX2a_HOX2a <LFY          *TSS           <-----------HVH21             ==============================HOX2a_HOX2a   agcatctttaactcacttccgtcactcgcttccttcacgtctctctcccaaaattcaaattcctcaggcctaaccaatcctgtgatcgacgtcgtcaaat  278700                             ------>ZmHOX2a(2)                             ===============HOX2a_HOX2a                       <---------ANAC58                       <---------AtLEC2     --------->GLK1(2)                       <---------ANAC58    <---------GLK1(2)                 =====================HOX2a_HOX2a                 ===========================HOX2a_HOX2a            --------->LBD16--------->ARR14(2)                                                <-------           <---------ANAC55(2)       ------>ZmHOX2a(1)                          --------->GLK1(2)           --------->ANAC55(2) ------>ZmHOX2a(1)                               --------->ARR14(2)           <---------ANAC58--------->ARR11(3)                                  <---------GLK1(2)  ---------->DOF2------>ZmHOX2a(2)   <-----------RAV1(1)               --------->DOF5.7(2)   <------- -HVH21    <---------ANAC58<---------ARR11(3)                 -------->P ---------->DOF2     <-------   attcaaaagcagtccgtgatccattgcatgatcctcttcctgtgggattcttactctcatggctaacccagacgttaaagagattctctgcgattgtgtg  278800                                         --------->AHL20(2)             <---------WOX13(1)                                       <---------MYB52(1)             --------->ATHB12                                      --------->LBD16                <---------YAB1                                      <-------GAMYB              --------->ATHB12             ------- --ANAC46                            ----------->GT1          <---------At4g35610         --------->ARR14(2) --ANAC58                    <-----------GT1             <---------ANAC58                 --------->GLK1(2) --ANAC58       <-----------GT1 <----------DOF2          <---------ANAC58                 <---------ARR14(2)   ataaacttggtaagaatttttcattttgttttttcttttccgttaaaattcaatccattgctggagatgatttgattgaatttcagagagagaatccgaa  278900                                                            <<<<<<<<<AtERF-7                                                            <<<<<<<<<AtERF-5                                                            <---------RRTF1(1)                                                            <<<<<<<<<AtERF-3                                                            ------>NtERF2                                                            <---------ERF1                                                            <<<<<<<<<AtERF-4                                                    --------->ZAT18                                                   <<<<<<<<<<<<<<<<<LFY                                                   >>>>>>>>>>>>>>>>>LFY                                                  --------->ANAC58                                            --------->RAP2.3(1)                                           <---------ERF1  <---------ATERF1(2)                                           <---------DEAR4(2)                                           <---------ATERF1(1)                                           ------>NtERF2   <---------RAP2.3(3)                                           <---------ORA47(2)                                          --------->ATERF1(2)--------->ATERF1(1)                                          --------->DEAR3(1)<---------RAP2.3(1)                                          <---------DEAR3(1)<<<<<<<<<AtERF-1                                          <---------ATERF1(2)<------NtERF2                                          <---------RAP2.3(3)--------->At4g35610                                          <---------RAP2.3(2)<---------At4g35610                                         --------->ATERF1(1)<---------ATERF1(1)                                         <---------ABI4(1) --------->ATERF1(2)                                         <---------LBD16   <---------DEAR3(1)                                         <---------At4g35610<<<<<<<<<AtERF-2                                        <---------RAP2.3(1)<---------RAP2.6(2)                                       <---------DEAR3(1)  <---------ANAC58                              --------->ALFIN1    --------->ANAC46                           <-----------RAV1(1)    --------->ANAC58                                  <                           <---------AtMYB61<------NtERF2  <---------RAP2.3(2)                      <                           --------->ALFIN1<---------RAP2.3(1)            <-----------HVH21       ---                       <-------GAMYB<---------ARR14(2)     <---------ANAC58              <---------ARR11(3)                   <-----------HVH21--------->ARR14(2)     <---------RRTF1(2)            --------->ARR11(3) -->LBD16         --------->ANAC46  <---------GLK1(2)     --------->RAP2.6(3)    <-------------------   gaggcgaagggagacggtttacgtcggatgtggtgctggattcggcggcgataggccactggcggctctcaaactgcttcagagagttgaagagcttaac  279000              <---------ANAC58              <---------ANAC58          <---------ANAC58          <---------ANAC58   <----------DOF2               <-----------RAV1(1)       ------>ZmHOX2a(1)   ------->TEIL                  <---------At4g35610      --------------------->WRI1 <---------At4g35610     --------->At4g35610 ---------ANAC58       --------->SPL7         <----------DOF2 ---------ANAC58      --------->MYB52(1)     <---------ANAC58 <---------ANAC58 ------>ARR11(3)     <---------SPL7          <---------ANAC58 <---------ANAC58   <---------O2 ----TaNAC69(2)   --------->At4g35610  ------>ZmHOX2a(2) ----------->RAV1(2)     --------->O2      <-   tatcttgtccttgagtgcttagccgaacgaactttggctgatcgatggctttctatggcatctggcggtctcggctacgaccctcgtggtatgtttttgg  279100  Previous    Next  AGI:  At1g01760.1    Description:  RNA binding / adenosine deaminase. similar to unnamed protein product [Vitis vinifera] (GB:CAO39555.1); contains InterPro domain Adenosine deaminase/editase; (InterPro:IPR002466) Range:  from: 276266    to: 278448    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g01770.1    Description:  similar to hypothetical protein [Vitis vinifera] (GB:CAN74802.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39542.1); similar to hypothetical protein OsI_024980 [Oryza sativa (indica cultivar-group)] (GB:EAZ03748.1); contains InterPro domain Protein of unknown function DUF1446 (InterPro:IPR010839) Range:  from: 278615    to: 282891    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.