Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                     <---------AHL20(2)                                                                                  <---------AHL20(2)                             ------>ZmHOX2a(2)                                    --------->AHL20(2)                             ====================HOX2a_HOX2a                  <---------AHL20(1)        --------->ATHB12   --------->ARR11(3)                                 <---------AHL20(2)     ----------->GT1       <---------ARR11(3)         --------->YAB1          --------->AHL20(2)   ---------->DOF2---------->DOF2                  --------->WOX13(1)         --------->AHL20(1) -------->DOF2  --------->ANAC58                 <---------YAB1              --------->AHL20(2) ----YAB1       --------->ANAC58          <------ZmHOX2a(1)                  <---------AHL20(2) <----   agaaagaaagtgattagaacgaaagacatgatctaaacagagtaggataacatcattcagaacgagccaattctcacaaataaattaaatgcaacttaag  245600                                                                                             <-------                                                           <---------RVE1(1)           <---------AHL20(2)                                                          <---------ARR11(3)          --------->AHL20(2)                              ---------->DOF2             <---------GLK1(2)       --------->AHL20(2)                           --------->At5g28300      <---------YAB1            <---------RVE1(1)                           --------->LBD16       <------ZmHOX2a(2)           <---------ARR11(3)                          --------->TOE2(3)  <---------TOE1(2)               <---------ARR14(2)                        <---------At5g28300 ------>ZmHOX2a(1)                <---------GLK1(2)   ----                    <---------ICU4         --------->TOE1(2)         ---------->DOF2  <---------AHL20(2)              --------->TOE2(3)        --------->GLK1(1)  --------->ARR11(3) --------->ARR14(2)  <--- -----At4g35610--------------------->WRI1  --------->TOE2(2) <---------AHL20(2)   <---------AHL20(2)   ctaatcgcagaacatttcttaattcttaccgtaaaagacacatttcctacgatcattttagattttttttttaaagccagatttttaatttaaaatgtca  245700                                   <---------ARR14(2)                                   --------->ARR14(2)                             <---------ANAC55(2)                             <---------ANAC46                                  ---------->DOF2    ---                             <---------ANAC55(1)                           <---------LBD16       <---                             <---------ANAC58                             <---------O2          <----                             <---------O2                              ----------->HVH21       ------                             <---------ANAC58                          ----------->TGA1 <---------TOE2(3)       ----------->GT1      <-------TEIL                       <---------TOE2(3)      ----------->HVH21 ----HVH21  ---------->DOF2--------->CCA1(2)                   <---------TOE1(3)    <----------DOF2 ----->At4g35610        <---------YAB1                --------->ARR11(3)  <---------bZIP60(2) ------- ------At4g35610    <---------AHL20(2) --------->LBD16<---------ARR11(3)  <---------ANAC46   <-------   actcagagaagattaaaagtatatatatgatacgtggaatccgaaatcgaagacaagataattttagggtttagtgacggggaaagctttgacgaagtca  245800                                   <---------ANAC58   ----------->GT1               --------->ARR11(3)   <---------HSFB2a(1) ------>LBD16          <-------TEIL<---------ANAC58   --------->HSFB2a(1) ------ANAC46      --------->ARR11(3)                 <---------HSFC1(2) -----LBD16        --------->AHL20(1)   <---------ANAC58              <-----------GT1  <---------GLK1(2) --->MYB52(1)      <---------ARR11(3)   <---------ANAC46  <---------ANAC58        <---------ARR14(2) ---->HVH21       --------->AHL20(2)    <---------ANAC58  <---------ANAC58        --------->ARR14(2)< ----HVH21      --------->AHL20(2)<---------ZAT2      --------->HSFC1(2)         <---------CCA1(2)  <   cggagaagtagaaacaaaaaatatatacatgtagagagcttggcttgatagtgagaaatttcgtttcgaaatttacctgttctatatccgattttcagac  245900              --------->DEAR3(2)              <---------MYB55(2)              <------------AtMYB77              --------->MYB46(3)             -------->P                                                <---------ZAT14           --------->MYB46(3)       <---------At4g35610                --------->ZAT14  *TSS          <------ZmHOX2a(2)     <------NtERF2                   --------->TCP20    ------->GAMYB----- --------->YAB1--------->DEAR3(1)   <---------ZAT2              --------->TCP16(1)--------->MYB46(3) <---------ICU4------->GAMYB   --------->LBD16               --------->ALFIN1    <---------At4g35610 ---------ATHB12             <---------LBD16               <---------ANAC46      --------->At4g35610 ---------ATHB51  --------->DEAR3(1)--------->At4g35610    <---------bZIP60(2) <---------WRKY38(1)   caataatgtccgatcaaccgccgttcaattagccggagagctgaagaagagcaattctatgaggtggagccagtgaagaagtcaacagactactgagcaa  246000                                                      --------->ANAC46                                                      --------->ANAC58                                                      --------->ANAC58                                                   ----------->HVH21                                                   --------->TGA2(2)                                                  <-----------HVH21                                                  <-----------TGA1                                                 <---------O2                                                 --------->ANAC55(2)                                                 --------->ANAC55(1)                                                 --------->ANAC46                                                 --------->O2                                                 --------->ANAC58                                                 <---------ANAC55(2)                                                 <---------bZIP60(1)                                                 --------->ANAC58                                                 --------->bZIP60(2)                                                 --------->bZIP60(1)                                            --------->bZIP60(1)                                 -----                                            <---------bZIP60(1)                                <<<<<<                                            --------->ANAC46                                   <<<<<<                                            --------->ANAC58                                   <<<<<<                                      <---------TOE2(3)                                        <-----                                      <---------TOE1(3)                                        <-----                                     <-----------RAV1(2) ------->TEIL                          <<<<<<                         <---------ANAC46   --------->ANAC58                                  <------          <---------HSFB2a(2)  <---------TOE2(3) --------->TGA1a                              <------          --------->HSFB2a(2)  <---------TOE1(3) <---------TGA1a                  <-----------GT1        ------>ZmHOX2a(1)----------->GT1 --------->ARR14(2)                 --------->YAB1    ------- ----->DOF2     --------->ICU4<-----------GT1  <---------ALFIN1          --------->ATHB12    <-------   aagttttttcctcgagaaataatcgtggagtttaacgattcaggttacgacacgtcacgaagctattagtatgaacgattagaattacttcgcctagatc  246100                                                                        --------->ANAC58                                                                        --------->ANAC58 ->ZmHOX2a(2)                                                           --------->ANAC46 <<<GATA-1                                                             <---------LBD16 <<<GATA-3 --------->AGP1                                   --------->At4g35610 <<<GATA-4 <---------ARR14(2)                 --------->AHL20(2)    --------->ANAC58 -ZmHOX2a(2)      --------->DAG2            ----------->GT1--------->ALFIN1 ----GLK1(1)     ---------->DOF2            <---------ANAC55(2)     --------->ANAC58 <<<GATA-2 --------->ARR14(2)             --------->AHL20(2)<---------At4g35610 ---ARR11(3)--------->CCA1(2)          --------->WOX13(1) <---------ZAT14                      <----- ---AGP1   <---------ARR11(3)       <-----------HVH21     --------->ZAT14                 <----------DOF2 -->ARR11(3)<------ZmHOX2a(2)       <--------ZAP1         <---------ZAT18          <---------TOE1(3) --CCA1(2) --------->ARR11(3)   <---------LBD16           --------->ZAT18          <---------TOE2(3)   tcttcttatttaagatccaaaaagcttacaaacatcggggtcaattaagtaaatttgcagtgtgctgaataagcacggagtatttagggtttcttttttc  246200                               --------->ANAC58                              --------->GLK1(2)                           <------ZmHOX2a(1)                      <---------WOX13(1)                        <------ZmHOX2a(1)         --------->AHL20(2)        <---------GLK1(2)                  <---------ANAC58          ----------->GT1      <---------ANAC58                  <---------ANAC58         ----------->GT1      --------->ATHB12           --------->ANAC46             <----------DOF2   --------->ANAC58--------->AHL20(2)<---------ANAC58      <-----------GT1 -------------------ANAC81<----------ID1 ---------->DOF2      <---------WOX13(1)     --------->YAB1 <   ttctgtttctctgttctttttcgtaaggaggacaagaaaatggaaaagataaatttatacacagattgattgcatagagaatcgcattaataccctccat  246300                                                                               <---------ANAC58                                                                               <---------ANAC58                                                                     --------->ATHB12                                                                     -------->ATHB1                                                                    --------->ICU4              <-------TEIL                                          <---------ATHB12             --------->CCA1(2)                                      <---------YAB1   <---------ANAC58                                          ----------->RAV1(1)   <---------ANAC46                                    --------->YAB1--------->YAB1   <---------ANAC58 <---------TOE2(3)                 ---------->DOF2<---------ICU4 ---------GLK1(1)   <---------TOE1(3)    ---------->DOF2  --------->YAB1    <----------DOF2   ggatttcgtagtaagatacatgaaggttttatttgttatttcacaaagaaattccaaaaatcacaacataatcattgactttcttgttttttctcatata  246400                                                        --------->ANAC46                 <---------YAB1                    <---------YAB1                 <---------AHL20(2)              --------->YAB1               --------->YAB1                   <---------YAB1                                    <--            --------->TOE2(3)                 --------->YAB1                                     <---          <---------TOE2(3)                <----------DOF2                                       <---      ------->TEIL                       <---------ATHB12      ----------->GT1     <---------YAB1<---   gatagatgaatcaacgtttataatttgggttcttctccagccaatcttttatgattatacgaagagtgtgatttggaacgagattgtgattctcaagcgg  246500  Previous    Next  AGI:  At1g01670.1    Description:  U-box domain-containing protein. similar to U-box domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G01680.1); similar to unknown [Populus trichocarpa] (GB:ABK95716.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain U box; (InterPro:IPR003613) Range:  from: 242843    to: 245988    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g01680.1    Description:  U-box domain-containing protein. similar to U-box domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G01670.1); similar to Protein kinase; U box [Medicago truncatula] (GB:ABD32822.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39621.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain U box; (InterPro:IPR003613) Range:  from: 246411    to: 248367    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.