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Chromosome 1
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Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<--
<---------
WOX13(1)
<
--------->
ANAC58
---
<----------
DOF2
--------->
ANAC46
---
<----------
DOF2
<-----------
GT1
--------->
ANAC58
--------->
AHL20(2)
----->
ZmHOX2a(1)
--------->
AHL20(1)
--------------->
AtSPL8
----
--
GLK1(2)
<-----------
GT1
--------->
ARR11(3)
<---------------
AtSPL8
<---
tcctaatgctttttttcttcttgggaaaaatgaatacatatattgactcttttttttcatacatatttgtactcaacatagttgatttatatcgacttaa
146800
<---------
At4g35610
<---------
AHL20(2)
--------->
AHL20(2)
--------->
ATHB12
--------->
ANAC58
-------
ICU4
--------->
ANAC58
---------
YAB1
----------->
GT1
--------->
ANAC58
--------->
MYB52(1)
----->
HAHB4
<---------
ANAC46
--------->
DAG2
----------->
HVH21
------>
YAB1
<---------
ANAC58
---------->
DOF2
----------->
TGA1
----->
ICU4
--------->
At4g35610
--------->
AHL20(2)
--------->
ANAC58
-----
------
ATHB51
<---------
ANAC58
<---------
YAB1
--------->
WOX13(1)
<---------
ATHB12
ttatgatttattcatctgcgtgtaaatataaaacatcaagtagtatcattttaaaaaaagcaattagacaagaacatgacggagcaaatgatgtaatgca
146900
------>
NtERF2
-
<---------
ALFIN1
-----
--------->
ATERF1(1)
<----
<---------
ATERF1(1)
---------
------>
NtERF2
---------
--------->
ATHB12
--------->
At4g35610
<--------
<---------
YAB1
--------->
ANAC58
<---------
ANAC58
--------->
AHL20(2)
<---------
GLK1(2)
--------->
ANAC58
<---------
ANAC58
<---------
AHL20(2)
<---------
YAB1
--------->
ANAC46
--------->
ZAT14
--------->
AHL20(1)
--------------
------>
RAV1(1)
------>
ZmHOX2a(1)
<---------
ZAT18
--------->
ARR11(3)
==============
acatgtcttatgattctcattggtccttaaacgaaatcactcgagcattgcacacatactgacatatattggctgccacccataagttgctaaattaatt
147000
--------->
MYB52(1)
------>
MYB46(1)
------>
MYB46(1)
------>
MYB83
--------->
ORA47(1)
--------->
DEAR3(1)
--------->
AHL20(1)
--------->
MYB46(3)
--------->
AHL20(2)
--------------->
AtSPL8
------>
ZmHOX2a(1)
<---------
MYB59
--------->
YAB1
<---------------
AtSPL8
--------------->
AGL15
--------->
YAB1
<---------------
AtSPL3
--------->
TOE1(3)
--------->
MYB46(3)
-------->
YAB1
---------->
DOF2
--------->
TOE2(3)
--------->
AtMYB61
---->
AHL20(2)
<------
ZmHOX2a(1)
----------------->
AG
------>
MYB83
-----
AHL20(2)
<---------
TOE2(3)
<-----------------
AGL3
>
AHL20(2)
<----------
DOF2
--------->
ANAC46
--------->
DEAR3(2)
>
AHL20(1)
<---------------
AGL15
--------->
ANAC46
<---------------
AGL15
<-------
GAMYB
-
AHL20(2)
============================================================
MADS_MADS
----------
->
AGL15
----------->
GT1
<---------
TOE1(3)
--------->
CCA1(2)
<-----------------
AGL1
<---------
MYB46(3)
=====================================
MADS_MADS
<-------
TEIL
----------------->
AGL1
<---------
MYB52(1)
aataagaataatattagttaaatccgatttaaggaaaacaaagtacgatatacatcatacacgattccttaatgtggaaaccgaccaaaccggtcgttaa
147100
-----
-----
-----
<------
-------
-------
<------
<------
*
TSS
--------->
TOE1(3)
<---------
ICU4
<----------
DOF2
---------
--------->
AHL20(2)
<---------
ATHB12
--------->
ZAT14
<---------
SPL7
<---------
YAB1
--------->
TOE1(3)
<---------
At4g35610
-------------
---------->
ID1
--------->
ARR14(2)
--------->
TOE2(3)
------>
ZmHOX2a(1)
--------->
TOE2(3)
->
GT1
----------->
TBP
--------->
ANAC46
--------->
WOX13(1)
--------->
At4g35610
-------------
actttgcccttataaatacagaatacacttcatgttcttcccttaaaaatcc
atcattctctcttcctctctgctctctctttaccttaaaccgtaccaa
147200
--------->
ATHB12
--------->
ICU4
<---------
YAB1
--------->
ZAT18
->
MYB83
<---------
ARR11(3)
--------->
SPL7
->
MYB46(1)
--------->
ARR11(3)
<---------
ANAC46
---->
MYB52(1)
<---------
CCA1(2)
--------->
At4g35610
---
MYB46(2)
------>
ZmHOX2a(2)
--------->
ANAC46
-
-->
AtMYB61
--------->
YAB1
--------->
ANAC58
-
-->
MYB46(3)
----------->
GT1
--------->
ANAC58
--
---
MYB111(1)
<---------
DEAR3(1)
<---------
ZAT18
<---------
ARR14(2)
<---------
HSFC1(2)
---
MYB59
--------->
YAB1
<---------
ZAT18
<---------
ZAT14
<---------
At4g35610
--------->
HSFC1(2)
>
SPL7
<---------
WOX13(1)
--------->
ABI4(2)
--------->
ZAT14
--------->
At4g35610
<-------------------
-->
AtSPL3
--------->
ANAC46
<----------
DOF2
<----------
DOF2
<------
NtERF2
---
-->
AtSPL8
--------->
YAB1
<------
ZmHOX2a(2)
<---------
TOE2(3)
--------->
ARR14(2)
--------->
HSFB2a(1)
accgtattgattgataatattgcacggtgcgatcgtaaatctttgtgtactaaggtgtcttttgag
atgaatacgcagcgtaagtcgaagcatcttaaga
147300
--------->
MYB46(3)
<---------
ATHB12
------>
MYB83
------>
MYB46(1)
--------->
GLK1(1)
<---------
ANAC58
>>>>>>>>>>>>>>>>>
LFY
--------->
ARR11(3)
<---------
ANAC46
-------->
P
<---------
MYB52(1)
<---------
ANAC58
----->
MYB46(1)
<---------
At4g35610
--------->
ZAT14
----->
MYB83
<----------
DOF2
<---------
ARR11(3)
<------
NtERF2
------->
WOX13(1)
--------->
At4g35610
--------->
At4g35610
<---------
ZAT14
--
WRI1
<-----------
RAV1(1)
----------->
GT1
--------->
ANAC46
--------->
MYB46(3)
<-----------
GT1
------>
AtMYB61
<---------
At4g35610
<---------
LBD16
------>
ZmHOX2a(2)
--------->
ALFIN1
<-------
ccaatccaaccattgttgcctcttcttctgaag
gtaacaactttctccgctatctcatgatctccatccactatacggtgtcgtttgattttactctttt
147400
<---------
PCF2
--------->
TOE1(2)
<---------
ANAC55(1)
--------->
TGA1a
<---------
bZIP60(1)
<---------
TGA1a
--------->
O2
<---------
ANAC58
<---------
ANAC58
<---------
bZIP60(2)
<---------
O2
--------->
ANAC58
----------->
GT1
<---------
ANAC46
<---------
ANAC58
<---------
AHL20(2)
----------->
STF1
<---------
At4g35610
<---------
YAB1
<---------
TGA2(2)
--------->
At4g35610
--
--------->
YAB1
----------->
TGA1
--------->
ZAT18
--------->
ANAC58
<-
<---------
YAB1
----------->
bZIP910(2)
<---------
ANAC58
<--
--------->
ICU4
>>>>>>>>>
SARD1
--------->
ALFIN1
<---------
ANAC46
<------
ZmHOX2a(1)
---
DOF2
--------->
YAB1
>>>>>>>>>
CBP60g
----------->
HVH21
--------->
ATHB12
<-----------
RAV1(2)
ttttttttgaaataataataaatgtgaaatttggatgatgacgtgggacag
aagtgagcagtcttgagtgggaagaaatagcaatggctcaggaagaaga
147500
<---------
DEAR3(2)
--------->
ETT(1)
<---------
DREB2C(2)
<---------
At1g77200
----------->
GT1
<------
ZmHOX2a(1)
----------->
HVH21
<---------
AHL20(2)
<---------
AtLEC2
<---------
DEAR4(1)
------>
ZmHOX2a(1)
<---------
AHL20(1)
------->
ARR14(2)
<---------
DEAR3(1)
--------->
TOE1(3)
<---------
ARR11(3)
--------
ARR14(2)
<---------
ANAC58
<---------
ANAC55(2)
<---------
ARR11(3)
<
----
ZmHOX2a(1)
<---------
ANAC58
--------->
TOE2(3)
--------->
ARR11(3)
-
ggatttgatttgcaggatgtataagcttgtcggtgaaag
gtttttcatgttttctcttattccttaacattttttttggttaaatctttcaatatatgtg
147600
<---------
At4g35610
--------->
At4g35610
----------->
RAV1(1)
<------
ZmHOX2a(1)
--------->
HSFB2a(2)
--------->
ARR14(2)
<---------
ARR14(2)
--------->
HSFB2a(1)
<---------
AHL20(2)
<---------
HSFB2a(2)
--------->
YAB1
--------->
AHL20(2)
<---------
LBD16
<
<---------
YAB1
--------->
ALFIN1
<---------
HSFB2a(1)
<--
---------
AHL20(2)
--------->
DAG2
<------
ZmHOX2a(1)
--------->
At4g35610
<
-------->
AHL20(2)
---------->
DOF2
--------->
ZAT2
--------->
LBD16
<-----
attttaataagggaattgaagattagtttgtttgtttgtaaag
gtgggatttaatagctgggaggattccaggaagaacagcagaagagattgagaggtt
147700
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AGI:
At1g01380.1
Description:
ETC1 (ENHANCER OF TRY AND CPC 1); DNA binding / transcription factor. similar to ETC3 (ENHANCER OF TRY AND CPC 3), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT4G01060.3); similar to unnamed protein product [Vitis vinifera] (GB:CAO69366.1); similar to Myb-related TRIPTYCHON-like protein [Vitis vinifera] (GB:ABW34395.1); contains InterPro domain Myb transcription factor (InterPro:IPR015495); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain SANT, DNA-binding; (InterPro:IPR001005); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Myb, DNA-bin
Range:
from: 147153
to: 147942
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.