Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                               --------->AHL20(1)                                                                             <---------AHL25(1)                                                                             <---------ARR11(3)                                                                             --------->AHL25(2)                                                                             --------->AHL25(1)                                                                             <---------AHL20(3)                                                                             <---------AHL20(1)                                                                             --------->AHL20(2)                                                                             <---------AHL20(2)                                                                             --------->AHL20(3)                                                                             <---------AHL25(2)                                                                             --------->AHL25(3)                                                                             --------->AHL12(1)                                                                 <---------AHL12(1)                                                                 --------->AHL12(1)                                                                <---------AHL25(2)                                                                --------->AHL25(2)                                                                <---------AHL25(1)                                                                --------->AHL12(1)                                                                <---------AHL25(3)                                                                <---------AHL12(2)                                                                --------->AHL12(3)                                                                <---------AHL12(1)          --------->ANAC58                                      --------->AHL25(1)          --------->ANAC58                                     --------->AHL25(3)       <---------ARR11(2)                                      <---------AHL12(3)       <---------ARR14(2)                                      --------->AHL12(3)       --------->ARR11(2)                      --------->At4g35610           <---------AHL12(1)       --------->ARR14(2)          <---------YAB1              --------->AHL20(2)      <------ZmHOX2a(1)          --------->AHL20(2)            --------->AHL25(1)  --------->DOF5.7(1)            --------->YAB1<---------At4g35610           --------->ARR11(3) --------->DOF2     <---------GATA12         <--------P        <---------AHL25(1) -------AHL20(2)    <---------ARR11(3)   --------->DOF5.7(1)   <---------AHL25(2)     --------->DOF5.7(1) --AHL25(2)         --------->ARR11(3)  --------->DAG2   <---------ZAT6      <---------AHL25(3) --AHL20(3)         --------->GLK1(2)   --------->DOF5.7(1)    --------->AHL25(2)  ---------->DOF2 ->AHL25(2)         <-----------ARR10  --------->DOF5.7(1)    --------->AHL12(2)  <---------AHL20(2) ->AHL20(3)         --------->RVE1(2)  ---------->DOF2 ----------->GT1      <---------KAN1       <---   taaaaagaggaaacgaaacaaaaatctagccacaattataaaaaagggtagatgaattagtgaaaaaaaattcaaagaatatattaaaagaagggaagaa  13300                  <---------ANAC58  --------->YAB1                --------->ARR11(3)  --------->AHL20(2)          --------->YAB1           <---------YAB1                                              <-----        --------->RVE1(2)      <---------DAG2                                                <-------   ----------->GT1<---------ANAC58--------->AHL20(2)                                <----------DOF2 ---------->DOF2<---------ARR11(3)--------->AHL20(3)                  --------->ARR11(3)     <------- --------->DOF5.7(1)  <---------AtMYB61                               <---------RVE1(2)      <------- -------ID1 ---------->DOF2    --------->TOE2(3)                --------->ARR11(3) <---------DOF5.7(1)   ggaaaaagaaaatcaaaagttcttgtggtctcaccttataatataagagagagagagggagagagagatgttgatattgaagtcttctttctcttgctgg  13400                                                                                                    -                                                                                                    <                                                                                                    <                                                                                                   <-                         <---------WRKY18(1)                                                       ==                        --------->WRKY12                                                        -----                        --------->WRKY38(1)                                                     -----                        --------->WRKY45                                                       ------                <-----------GT1                                                                <-----             --------->GATA12                                                                 <------             <---------ARR11(3)                                                               <------        <---------ANAC46----------->HVH21                                                    <-------   <---------KAN1     <----------DOF2      <------ZmHOX2a(1)                             <----------DOF2 ----MYB46(3)<---------GLK1(2)     <---------WOX13(2)                                 --------->ARR11(3) --ANAC46    --------->ARR11(3)   --------->AHL12(1)          --------->GLK1(2)       <---------ARR11(3) --ANAC58    <---------RVE1(2)    <---------AHL12(1)         <---------GLK1(2)       <---------CCA1(2) --ANAC58    <---------GATA12 --------->AtLEC2   <---------YAB1                     ------->TEIL-----   ttcgattgtttcttagattttcttctttgaccatgaaaatttagaggaaatatgaaaaccctagaatcggaagaaaactatatatgtatatctttccgtt  13500                                                                                             <-------                                                                                            <--------                                                                                      ------>ZmHOX2a(2)                                                                                     <---------GLK1(1)                                                                                     <---------KAN1<-                                                                                     <------ZmHOX2a(2)                                                                                     --------->GLK1(1)  --------->AHL20(2)                                                                <---------GATA12 -------------->AGL15                                                               <---------AGP1<-- ----------DOF2                                                                     <---------ARR14(2) ---------------AGL15                                                               --------->GATA12 ----------------AGL3                                                               <---------ARR14(3) ========================================================================MADS_MADS  --------->RVE1(2) ---->WRKY45                                                                        --------->GLK1(2) ---->WRKY38(1)              --------->DOF5.7(1)                                    --------->ARR11(3) --->DOF5.7(2)              --------->DOF5.7(1)                                     --------->ARR11(2) ----MYB52(1)              ---------->DOF2    <------ZmHOX2a(1)     <---------ANAC58<---------ARR11(2) -GAMYB               ---------->DOF2      <---------ICU4           <---------ANAC58<-----------ARR10 ---At4g35610      --------->ANAC58       <---------ATHB12      <---------ANAC58    <---------ARR11(3) --ANAC46          --------->ANAC58 --------->ANAC58            <---------ANAC58    --------->ARR14(2) ---->WRKY12       <---------TOE2(3)--------->ANAC58   <-----------------AGL3      <------ZmHOX2a(1)   gactttatatagaatgaaatcaaggaaagaaaagagctaagcaaatcaggacttagaactcaaattgggttcttgccaaacaagaggatctctctctttc  13600                                                                                                -----                                 --------->GLK1(2)                                              <----                                <---------GLK1(2)                                        <---------ANAC58                                <---------RVE1(2)                                        <---------ANAC46                          <---------ANAC46                                           --------->KAN1                          <---------ANAC58                                          <---------KAN1                          <---------ANAC58                                      <---------ANAC46<---- ---DOF2                 <------NtERF2                                     <------MYB83  <---------ANAC58 -DOF5.7(1) ----------->GT1    --------->KAN1                              <------MYB46(1)      <---- ---------DOF2         <---------RAP2.6(2)                                <---------------AtSPL8----- -------DOF5.7(1)--------->DOF5.7(1)                                     <---------WOX13(1)   -------   tctttatgaagatgaagaaaaaatggtggcttgagattcttgatagagtttcaagacttagagagagagagcgagattggtaccgagtaatgcgtagggg  13700        --------->CCA1(2)       <---------RVE1(2)      --------->YAB1       <---------At4g35610     <---------YAB5        --------->At4g35610    <---------WOX13(1)<---------O2 <---------ATHB12     --------->TGA1a      <---------WOX13(2)                          <----------DOF2 <---------YAB1       <---------TGA1a      --------->WOX13(2)                      --------->RVE1(1) ->NtERF2             <---------ANAC55(2)<---------YAB1                           <---------ARR11(3) -----PCF5            ===========================bZIP_DOF           <------------CBF  <---------DOF5.7(1) -----TCP20           --------->O2    ------>ZmHOX2a(1)        <----------DOF2    --------->ARR11(3) -----TCP15(1)*TSS<-----------HVH21   <----------DOF2         <---------DOF5.7(1) --------->GLK1(2) ---->PCF2   --------->ARR11(2)      <---------DOF5.7(1)<---------KAN1            --------->RVE1(2) -->ATERF1(1)<---------ARR11(2)    ---------->ID1      --------->WOX13(2)        <---------GLK1(2)   cccatgaatgatatggttcgggtcatgtgagcttcttgtccttttcattaggcttcgaattagctctttgtattgaaatttcaaaatctctttatacata  13800                                                                                                 ----                                                                                                 <---                                                                                                 <---                                                                                                 ----                                                                                                 <---                                                                                                 <---                                                                                                 <---                                                                                                 ----                                                                                                -----                                                                                                -----                                                                                                <----                                                                                                <----                                                                                                <----                                                                                                -----                                                                                                <----                                                                                                <----                                                       <---------------AGL15                    -----                                                       --------------->AGL15                    <----                                                <---------YAB5                                  -----                                       --------->RVE1(2)                                     ------>MYB46(1)                                       --------->GLK1(2)          <---------KAN1             ------>MYB83                                       --------->ARR11(2)        <---------ARR14(2)        <---------MYB46(2)                                       <---------ARR11(2)    --------->YAB5                --------->TOE2(3)                               <---------WOX13(2)<---------DOF5.7(1)                       <---------MYB59                               --------->WOX13(2)<---------ICU4  --------->ARR14(2)       <---------ANAC55(2)                       <---------DEAR3(1)   <---------MYB52(1)   <---------ARR11(2)       --------->ANAC55(2)          --------->YAB5  ----------->GT1 ----------->GT1   <---------YAB5              <-----------GT1      ------->TEIL  --------->ETT(2)   <---------ARR14(2)   <---------ATHB12     <---------DOF5.7(1)  ------->TEIL      <---------ETT(2)   --------->ARR14(2)   --------->ICU4      <----------DOF2 -----   tgtgtatgtatatgtttagttgtcgacggtgttaatttgagaatccgttaatcttttctctaatgagtatatgtgtgtgtttcttttttgttacctaatt  13900             <---------AHL25(1)             --------->AHL25(1)             --------->AHL25(2)             <---------AHL25(2)             <---------AHL12(1)                                                              <-------             --------->AHL12(1)                           <-------GAMYB                     ---------             --------->AHL20(3)                          <---------MYB46(3)                 ---------             --------->AHL20(2)                          <------MYB46(1)                    <-------- ----->AHL12(3)                                          --------->MYB55(2)                 <-------- ------AHL25(1)                                      <-----------RAV1(1)                    --------- ------AHL25(2)                                   -------->HAHB4                            --------- ----->AHL25(1)                                   -------->ATHB1                            <-------- ------AHL12(3)                                   --------->ATHB51                          --------- ------AHL20(2)                                   --------->ATHB12                          <-------- ------AHL25(3)                                   <---------ICU4                            --------- ----->AHL25(2)                                   <---------AHL20(2)                        <-------- ---->AHL12(1)                                    <---------AHL25(3)                       <---------YAB5 ---->AHL12(3)                                   --------->ICU4                            <---------YAB1 -----AHL20(2)                         <----------DOF2   <------MYB83                     <---------WOX13(2) -----AHL20(1)                     ------->TEIL  <---------ATHB12                         --------->WOX13(2) -----AHL12(1)                  <---------ANAC55(2) <---------YAB1    --------->YAB1      --------->AHL20(3) ---->AHL25(1)                <---------AHL12(1) <---------ATHB51     <---------AHL20(2)  <---------AHL20(3) -----AHL25(1)                --------->AHL12(1) <---------YAB5       <---------AHL25(1) <---------ICU4 -----AHL25(3)               --------->ICU4      <---------YAB1       --------->AHL20(2) --------->YAB1 ---->AHL25(3)              <---------WOX13(2)  --------->AHL12(2)  --------->WOX13(2)   --------->YAB5 -----AHL25(2)              --------->WOX13(2)  <---------AHL12(2)  <---------WOX13(2)  <---------AHL20(2) ---->AHL25(2)         --------->RVE1(2)       <---------ICU4     --------->ICU4        <---------YAB1 ---->AHL20(2)  <-----------GT1 <---------YAB1--------->ICU4   --------->ZAT6         --------->YAB1   tttttttaaaaacaattttttctattatctaattatgtatgctttctactaattattgttggttagcactaattaaaacaatttgaatttataattatat  14000                                    <---------KAN1         --------->MYB111(1)       --------->ARR11(2)         --------->MYB46(2)        <---------ARR14(2)         --------->MYB52(2)        --------->ARR14(2)                              ------>ZmHOX2a(1) --AHL25(3)                        <---------ARR11(3)                           ------>ZmHOX2a(1) >AHL20(2)                         <---------ARR11(2)                        <-----------GT1 >YAB1 <---------MYB52(1)      <-----------RAV1(2)                       <---------DOF5.7(1) -AHL12(1)               --------->LBD16                                <----------DOF2 -AHL20(2)              <---------LBD16  ------->TEIL                <-----------GT1 >AHL12(1)             <---------LBD16<---------ANAC55(2)         <---------AHL25(1) >AHL12(3)         ----------->HVH21--------->GLK1(1)             <---------AHL20(2) -AHL20(3)         ------->GAMYB  <------ZmHOX2a(1)               --------->AHL12(3) >AHL25(1)        <------------AtMYB77--------->ANAC55(2)         <---------AHL20(3) -AHL25(1)        <---------MYB52(2)--------->CCA1(2)--------->TOE2(3)---------->ID1                < >AHL20(3)      <-----------GT1--------->YAB1      -------->P     --------->AHL20(3)     --------->TOE2(3) -AHL12(3)<---------WOX13(2) --------->GLK1(2)<-----------GT1  ------->TEIL <-----------GT1      ----   atagtttttgttagttagtaactgacccgggaatcaggatatgtatttatactaacctctatatgtatttttttcttttttcctcctctaacctatatgt  14100                                                                                                    <                                                                                                    <                                                                                                    -                                                                                                    -                                                                                                    -                                                                                                    <                                                                                                    <                                                                                                    -                                                                                                    <                                                                                                 <---                                                                                                <----                                                                                               ------                                                                                               <-----                                                                                               ------                                                                                               ------                                                                                               <-----                                                                                               <-----                                                                                               ------                                                                                               ------                                                                                               <-----                                                                           --------->ANAC46    <-----                                                                           --------->ANAC58    ------                                                                           --------->ANAC58  <-------                                                                          ------->TEIL     <---------AHL20(2)                                                                <---------AHL25(3)         <---------AHL25(1)                                                               --------->AHL20(2)          --------->AHL25(1)                                                               <---------AHL12(3)          --------->AHL20(2)                                      --------->KAN4(1)        <---------AHL25(1)          --------->AHL25(2)                                      <---------KAN4(1)      --------->AHL12(3)            <---------AHL20(1)                                      <---------AHL12(1)     <---------AHL12(3)            --------->AHL20(3)                                      --------->KAN1         <---------AHL20(3)            <---------AHL25(3)                                      --------->HSFB2a(1)    --------->AHL20(3)            --------->AHL20(1)                                      <---------HSFB2a(1)  --------->AHL20(2)              <---------AHL20(3)                                      <---------KAN1       <---------AHL12(3)             --------->AHL25(3)                                      --------->AHL12(1)   --------->AHL12(3)   --------->ARR14(2)  -                           --------------->AGL15           <---------AHL20(2)   <---------ARR14(2) --                           <---------------AGL15    --------->ANAC58   --------->AtLEC2   --------->AHL20(2)   <---------HSFB2a(2)    ----------------->AGL3    --------->ANAC58 <---------AtLEC2   --------->TOE2(3)   --------->HSFB2a(2)  <-----------GT1--------->KAN4(2)   <---------AHL25(1)  <---------CCA1(2)<---- -----------GT1      <---------DOF5.7(1)          ---------->DOF2--------->CCA1(2)   <-----------GT1- --->TEIL        ------->TEIL        <---------KAN4(2)     --------->AHL25(1)  <---------KAN1--------   atttaccagaaaacaaatgcacattttttccatgtatagaatattctattacaaaagcaatataaatatatgcatgcacgcatattttcacattaaatta  14200  Previous    Next  AGI:  At1g01030.1    Description:  NGA3 (NGATHA3); transcription factor. similar to NGA1 (NGATHA1), transcription factor [Arabidopsis thaliana] (TAIR:AT2G46870.1); similar to AT1G01030 [Arabidopsis lyrata subsp. petraea] (GB:AAT72472.1); contains InterPro domain Transcriptional factor B3; (InterPro:IPR003340) Range:  from: 11649    to: 13714    Orientation: Reverse Links:  TAIR  MIPS  AIP      Please cite the corresponding publications when using AthaMap.