Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                 <---------ALFIN1                                                         ------>MYB46(1)                                                         ------>MYB83                                          --------->ANAC55(2) ------>MYB83                                          <---------ANAC55(2) ------>MYB46(1)                                   --------->YAB1        --------->MYB52(1)                                   --------->YAB5      <---------MYB52(2)                                  ----------->GT1      <---------MYB59                                  --------->ICU4       <---------MYB46(2)                                  <---------YAB1       <---------MYB111(1)                             <---------ANAC55(2)      --------->ANAC55(2)        <----------ID1       --------->ANAC55(2)      --------->ANAC46--------->KAN1           ------    ---------->DOF2        --------->YAB1 --------->ANAC58    --------->ZAT14                  <----- --->CCA1(2)              <---------YAB5  --------->ANAC46    <---------ZAT14            <---------ARR11(3) ---RVE1(2)              ------->TEIL     --------->ANAC58    -------->P                 --------->ARR11(3) >GT1--------->DAG2    --------->YAB5<---------YAB1 <-----------GT1<---------At4g35610  <---------KAN1   tgatgcaaaagtgacaaaatttcgatgaatcatgtgatgataatacgaaatgatatacctaacctacactgctcattctacatttgaagaatatatacct  8295300                          <---------ANAC55(2)                          --------->ANAC55(2)                        --------->AHL20(2)                        <-----------GT1                      --------->WOX13(2)                      <---------WOX13(2)                     --------->YAB5                     <---------ICU4                                  --------->ANAC46                    <---------KAN1                                   --------->ANAC58                    --------->ICU4                                   --------->ANAC58                --------->LBD16                                --------->YAB5               <---------HSFB2a(2)                            <---------YAB1         --------------->AGL15                              <-----------GT1         <---------------AGL15                             --------->ICU4        ----------------->AG                              <---------WOX13(2)        <-----------------AGL2                            --------->WOX13(2)        ----------------->AGL1                        --------->ANAC46                        -------        <-----------------AGL1                        --------->ANAC58                       --------        ----------------->AGL2                        --------->ANAC58----------->RAV1(1)    <-------   <-------TEIL--------->HSFB2a(2)      <-------TEIL  <---------ANAC55(2)                  <--------- --->TOE2(3)  <---------LBD16    <-----------GT1      --------->ANAC55(2)            ----------->GT1 ----MYB59  --------->GLK1(2)--------->AHL20(2)       --------->ANAC55(1)        --------->YAB5   aaatatacataccaattctgggataattacataatatacagtttcatattagtctcacgtaattacgattcacgacagtaagaagattagtttaaacggt  8295400                                                                                   --------->ANAC58                                                                         <---------KAN1                                                                         --------->KAN1                                                                         --------->HSFC1(2)                                                                         <---------HSFB2a(1)                                                                         <---------HSFC1(2)                                                                         --------->HSFB2a(1)                                                                        ------->TEIL  ----------->RAV1(1)                                                                        <-----------ARR10                                                                        --------->ARR11(2)                            <---------AHL12(2)                          <---------GATA12                            --------->AHL12(2)                          --------->GATA12                          --------->AHL20(2)                            <---------ARR11(1)                        --------->TOE2(3)                               <---------ARR14(2)                 <---------ANAC55(2) --------->ANAC58                   --------->ARR14(2)           --------->AHL20(1)        --------->ANAC46                  <---------CCA1(2) ---->GT1  --------->AHL20(2)        --------->ANAC58          --------------------->WRI1 ->ANAC46  <---------AHL20(1) <---------ICU4                   <----------DOF2  --------->ANAC46 --------AtSPL8  <---------YAB1--------->RVE1(2)              <---------DOF5.7(1)  --------->ANAC58 --GT1    <---------CCA1(2)<---------AHL20(2)     --------->KAN1       <---------ARR14(1)   acaaaacaattcatatattacgaaaacattaaatatcacacgaagagaagaaatatgcaaaacgtctttgctcgaatcttcgacgaagcaacatagtttt  8295500                --------->AHL12(2)                <---------YAB1                <---------AHL12(2)               --------->AHL12(2)               <---------AHL20(1)               --------->AHL25(2)                --------->ANAC55(2)               --------->AHL20(3)                <---------ANAC55(2)               <---------AHL25(2)              <-----------GT1               <---------AHL20(3)         <---------DOF5.7(1)            --------->TOE2(3)            <----------DOF2         <-----------GT1                 <---------DOF5.7(1)      <---------ZAT6     <----------TaMYB80--------->AHL20(2)    <---------ANAC58     --------->KAN1 <---------DOF5.7(1)   <----------DOF2               ---------    <---------ANAC46 <---------ANAC46  <---------DOF5.7(1)  ---------->ID1 --------->At5g28300    <---------ANAC58 ----------->GT1<-----------GT1----------->HVH21      ----------->GT1   <--------   tcatttgagtgtaacattatttttcgtaaattcccatttcacccttttattacatgacatttgtctttcactgagacagtaaaaactcaagtctaatttg  8295600                                                             <------ZmHOX2a(2)                                                           ------->GAMYB                                 --------->AHL12(3)       --------->MYB46(3)                                 <---------AHL12(3)      <---------TOE2(3)                     --------->AHL20(3)           <<<<<<<<<GATA-1                     <---------AHL20(2)           <<<<<<<<<GATA-4                    <---------DOF5.7(1)           <<<<<<<<<GATA-3        <---------ARR14(2)       ----------->TBP  <<<<<<<<<GATA-2    ------->GAMYB        --------->ARR11(2)       <---------AHL20(2)   <---------MYB52(2)       <---------ZAT14        <---------ARR11(2)       --------->AHL20(2)*TSS --------->MYB52(1)     --------->ZAT14        --------->ARR14(2)<-----------GT1       --------->WOX13(1)<---------ARR11(2)                < >WOX13(2)      <---------YAB5 ----------->TBP------------>CBF    --------->ARR11(2)  --------->ANAC58 -WOX13(2)<-------TEIL  <-----------GT1      <-----------HVH21    --------->MYB52(1)  --------->ANAC58   gacatttgcatatacatactcatttttttctctatatatatagaccatgtcaatccactaacgatccctaaccgaaaacagagtagtcaagaaacagagt  8295700                                                                     ------>ZmHOX2a(2)                                                                     ==============================HOX2a_HOX2a                                                                    ===============================HOX2a_HOX2a                                                                    --------->GLK1(1)                                                                    --------->HSFB2a(1)                                                                    <------ZmHOX2a(2)                                                                   <---------ARR14(2)                                                                   --------->ARR14(2)                                                                   <---------ARR11(3)                                                                   --------->GATA12                                                                   <---------GATA12                                                                   --------->ARR11(2)                                                                   <-----------ARR10                                                                   --------->ARR11(3)                     <---------AHL25(1)                  --------->KAN4(2)              <-------TEIL                              <----------TaMYB80              ------>ZmHOX2a(2)                         --------->HSFB2a(1)             <------ZmHOX2a(2)                          <---------KAN4(1)            <---------ARR11(2)                          <---------KAN1            --------->ARR11(2)                          <---------HSFB2a(1)       <----------DOF2            ------->TEIL                                --------->KAN1         --------->GLK1(2)            <---------GATA12                        --------->LBD16<---------ARR11(1)            --------->ARR14(2)                    <---------LBD16  <---------RVE1(2)            <---------ARR14(2)               <---------At4g35610   <---------ARR11(2)            --------->GATA12                 --------->At4g35610  <---------ARR14(1)         <-------       <---------AtLEC2<---------WOX13(2)  <---------GLK1(2)      <---------CCA1(2)         ------>ZmHOX2a(1)      <---------REM1(2)--------->WOX13(2)------>NtERF2 <---------KAN4(2)      --------->ARR14(2)  <-----------GT1    <---------AHL20(2)  --------->LBD16--------->KAN4(1)     <---------GLK1(2) ---------AHL20(2)  --------->AHL25(3) <---------LBD16 ---------->TaMYB80     <---------ARR14(2)   attttttctacatggatccatttttaattcagtccccattctccggcttctcaccggaatattctatcggatcttctccagattctttctcatcctcttc  8295800                                                                                    --------->TOE2(3)                                                                                ------->GAMYB                                                                               <---------MYB52(2)                                                                               --------->MYB46(3)                                                                             ----------->RAV1(1)                                                                          --------->ANAC58                                                                          --------->AtLEC2                                                                          --------->ANAC46                                                                          --------->ANAC58                                         <---------ARR11(2)               --------->ANAC55(1)     <--                                        <------ZmHOX2a(1)                <---------LBD16          ---       --------->KAN1                --------->At4g35610               <---------WRKY38(1)        ---    --------->YAB5                 <-----------RAV1(2)                 <---------ZAT18            <--    <---------ICU4             --------->YAB5                          --------->ZAT14            <-- --DOF5.7(1)                  <---------KAN1 --------->YAB5            <---------WRKY12       <------   ttctaacaattactctcttcccttcaacgagaacgactcagaggaaatgtttctctacggtctaatcgagcagtccacgcaacaaacctatattgactcg  8295900                                                                                            ---------                                                                                           <---------ANAC46                                                                                          --------->ATERF1(1)                        --------->LBD16                                                   <------NtERF2                       --------->ANAC55(2)                                                <---------LBD16                    --------->GATA12                                                      ------>NtERF2                    <---------GATA12                                                    <---------RAP2.6(2)                    <---------ARR11(2)                                             --------->ARR14(2)                    --------->ARR11(2)                                            --------->GLK1(1)           ------>MYB83<---------ANAC55(2)                                        <---------GLK1(1)       --------->ARR14(3)          ---------->DOF2                                <----------TaMYB80       <---------ARR14(3)   <---------At4g35610                       ------>NtERF2<---------ARR14(2)       --------->ARR11(3)   --------->At4g35610                     --------->RAP2.6(3) <---------DEAR3(1)       <---------ARR11(3)<---------MYB52(1)                         --------->ATERF1(1) <---------RAP2.3(2) -------RVE1(2)--------->RVE1(2) --------->ANAC58                  <---------ATERF1(1) <---------LBD16 ------>ARR14(2)    --------->RVE1(2)                          --------->DOF5.7(1)--------->KAN1 ---- ------>ARR11(2)    --------->ARR14(2)                        --------->SPL7(1)   <---------HSFB2a(1) -------ARR11(2)    <---------ARR14(2)                     <---------ANAC58      ----------->ARR10 -------ARR14(2)<------ZmHOX2a(2)--------->ANAC58          <---------ANAC46   ----------->GT1<------NtERF2 ---LBD16  ------>MYB46(1)--------->SPL7(1) --------->ZAT14<---------ANAC58--------->ALFIN1<---------DEAR3(1)   gatagtcaagaccttccgatcaaatccgtaagctcaagaaagtcagagaagtcttacagaggcgtaagacgacggccatgggggaaattcgcggcggaga  8296000                                                                <----------DOF2                                                              <------NtERF2                                                             <---------RAP2.3(1)                                                   --------->ANAC58                                                   --------->ANAC58                                                  <---------LBD16       --------->SPL7(1)                                        <---------SPL7(1)    ------>NtERF2   ---------->DOF2                                       <---------HSFB2a(1)  <---------DEAR3(1)                                       --------->HSFC1(2)   <---------RAP2.3(3)     <-------TEIL                      --------->KAN1   --------->DOF5.7(1) <------ZmHOX2a(2)    --------->CCA1(2)                  --------->HSFB2a(1)  <---------RAP2.3(2)      <----------DOF2<   --------->ARR11(1)                  <---------HSFC1(2)  --------->ATERF1(1)  <---------At4g35610 <   <---------GATA12        --------->ALFIN1       --------->ZAT18     --------->TOE2(2)  <---------HSFB2a(2)  --------->KAN1        <---------TOE1(3)      --------->DOF5.7(1)    --------->TOE1(2)  --------->HSFB2a(2) >LBD16                 <---------TOE2(3)    ---------->DOF2<---------RAP2.6(2) <---------ZAT2      - ----->CCA1(2)--------->MYB52(1)      --------->SPL7(1)--------->DOF5.7(1)  =========================   taagagattcgactagaaacggtattagggtttggctcgggacgttcgaaagcgcggaagaggcggctttagcctacgatcaagctgctttctcgatgag  8296100                                                                               <---------MYB46(3)                                                                         <------ZmHOX2a(1)                                                                     <---------TOE1(1)           --------->GLK1(2)                                         <---------TOE2(1)          <---------ARR14(2)                                        ------>MYB83                <----          <---------GLK1(2)                                         ------>MYB46(1)       --------->ALFIN1          --------->ARR14(2)                               <---------AHL12(2) <--------P<---------MYB52(1)       <------NtERF2                                      <---------AHL20(2) <-------GAMYB<---------MYB46(3)     <---------DEAR3(1)     <------NtERF2                --------->AHL25(3) <------MYB46(1)    <-----    ------>ZmHOX2a(1)     <---------ANAC46               --------->AHL20(2) <------MYB83<-------GAMYB ---------PCF2            <---------DEAR3(1)             --------->AHL25(1) <---------MYB46(3) <----- ---------ARR14(2)       <---------At4g35610             <---------AHL25(1)<---------AtMYB61   <----- -------->ARR14(2)       <---------LBD16          <---------ANAC46--------->TOE2(2)    --------->LBD16 ==========HOX2a_HOX2a <---------DEAR3(1)      <----------DOF2    --------->TOE1(2)  <---------LBD16   agggtcctcggcgattctcaatttttcggcggagagagttcaagagtcgctttcggagattaaatatacctacgaggatggttgttctccggttgtggcg  8296200  Previous    Next  AGI:  At3g23240.1    Description:  ATERF1/ERF1 (ETHYLENE RESPONSE FACTOR 1); DNA binding / transcription activator/ transcription factor. Identical to Ethylene-responsive transcription factor 1B (ERF1B) [Arabidopsis Thaliana] (GB:Q8LDC8;GB:Q9ZNR2); similar to ethylene-responsive factor, putative [Arabidopsis thaliana] (TAIR:AT1G06160.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71373.1); contains InterPro domain DNA-binding, integrase-type; (InterPro:IPR016177); contains InterPro domain Pathogenesis-related transcriptional factor and ERF, DNA-binding; (InterPro:IPR001471) Range:  from: 8295651    to: 8296611    Orientation: Forward Links:  TAIR  MIPS  AIP      Please cite the corresponding publications when using AthaMap.
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