Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                --------->WRKY38(1)                                              ----------->HVH21                                             <-----------HVH21                                             <---------MYB52(1)                                            --------->LBD16                                          <---------LBD16                                        <---------ARR14(2)                                        --------->ARR14(2)                                       <XXXXXXXXXXXXXXXXXXXXMIR841                                       <XXXXXXXXXXXXXXXXXXXXMIR841B           ----------->TGA1                                      xxxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)----------->HVH21               --------->LBD16       <---------DEAR3(2)                   <------MYB83              <---------HSFB2a(2)    <---------MYB46(3)                   <------MYB46(1)         ---              --------->HSFB2a(2)   <---------TOE1(2)                  <---------ANAC58        ------             <---------LBD16        <---------DEAR3(1)                 <---------ANAC58 <------ZmHOX2a(1)   --------->ARR11(3)        <---------ZAT6 <---------At4g35610  --------->AtMYB61   --------->DAG2 -YAB1      --------->MYB52(1)      <---------TOE2(2)           --------->ANAC46    ---------->DOF2--   agacagttcttggttaccggaagtgatactagtgttcgtcggtttccggtgactcgtcttgtgtccacctaaggcttggtatgacgaaaaggacttccca  26936800                                         ----------->TGA1                                         ----------->HVH21                                        ------->MYC2                                        <-------MYC2                                        <-------MYC4                                        ------->MYC4                                        ------->PIF4                                        ------->MYC3                                        ------->PIF5                                        <-------PIF4                                        <-------MYC3                                       --------->ANAC55(2)                                       <---------TGA1a                                       --------->ANAC46                                       <---------O2                                       --------->TGA1a                                       --------->O2                                  <-------PIF5                                       --------->ANAC58                         ------>NtERF2                                       --------->bZIP60(2)                     --------->PCF2                                       --------->ANAC58                        --------->ARR14(2)                                       <---------ANAC55(2)                     <---------ARR14(2)                                      ------------>OsbHLH66                   <------NtERF2                                     <---------ALFIN1                         --------->ATERF1(1)                                     <------------OsbHLH66                   <---------ATERF1(1)                                   --------->ANAC58                          <---------RAP2.3(1)                                   --------->ANAC58                         <---------DEAR3(1)                                ----------->HVH21                           --------->ALFIN1                               <-----------HVH21                           <---------LBD16                             <---------DEAR3(1)                          --------->ANAC46                            --------->SPL7                             <<<<<<<<<SPL1 ------->PIF5                            <---------ORA47(1)                         <<<<<<<<<SPL5--------->TGA1a     --------->SPL7       ----------->HVH21                         <---------------AtSPL3     --------->ZAT14      <---------SPL7<-------PIF5               <------------------SPL14     <---------ZAT18     ------>ZmHOX2a(2)--------->MYB52(1) <------ZmHOX2a(1)--------->RAP2.3(1)     <---------ZAT14     ==================================HOX2a_HOX2a <<<<<<<<<SPL4<---------TGA1a   <---------SPL7        =====================================HOX2a_HOX2a<---------DEAR3(1)        <- ------>DEAR3(1)        <---------At4g35610            <------ZmHOX2a(1)--------->SPL7            <-- ----->RAV1(1)       ----------->HVH21------->TEIL  <------ZmHOX2a(1) <---------SPL7================= ---------------->SPL14 --------->At4g35610--------->RAP2.6(3)  <------ZmHOX2a(1)   =================   cagaccgtacacttgtaatctcggtgatcggacggtgacgcacgtgacggtagaggaggaagaggaggagattgtacggcggagccacgagcgagcatga  26936900             <---------GLK1(2)             --------->MYB52(2)             <---------ARR14(2)      <---------ANAC58             --------->ARR14(2)      <---------ANAC58             <---------ARR11(3)     <-------TEIL<---------ANAC58           ----------->ARR10       --------->ARR11(3)      ----------->HVH21     ---------->DOF2             --------->HSFB2a(1)     <---------At4g35610   ---------->DOF2               <---------HSFB2a(1)     --------->At4g35610   <---------TOE1(3) ---------ID1--------->ARR11(3)  --------->HSFC1(2)     <---------YAB1         <---------TOE2(3) ----ZmHOX2a(1)                  <------MYB83<---------MYB52(1)               <---------DOF5.7(2) =============bZIP_DOF           <------MYB46(1)<---------ANAC58             --------->WRKY12 =============bZIP_DOF           <---------HSFC1(2) <---------GLK1(2)       --------->DOF5.7(2) <----   ggagacaaagagcgagatactcttcttcagaaggaaggttcttgttcgtttcttgattctgatgaccgtgatcaaaacgttgacgttttgttcgttttct  26937000                                                                        <-----------RAV1(1)                                                                        <---------MYB46(3)                                                                      <---------At4g35610                                                                      --------->At4g35610                                                                    <--------P                                                                  <---------MYB46(3)                                                                 <---------AtMYB61                                                               <---------MYB46(3)                --------->GLK1(2)           --------->LBD16    --------->MYB55(2)               <---------GLK1(2)          <---------LBD16     <---------DEAR3(1)               <---------ARR14(2)        --------->MYB52(1)   <---------AtMYB61         <---------ANAC58            --------->ANAC58         --------->ALFIN1         <---------ANAC58            --------->ANAC58      <---------DEAR3(1) ------DOF2    --------->ARR14(2)    --------->ANAC46   <------NtERF2 <---------ZAT2   tttagcccattgctcgagattctcaggctccatttcttcacgataccggagaagaggccgagcggtggtggtagctgttggagaattgagagtctcgaga  26937100                                                                              <------------CBF                                                                           *TSS                                                                         ----------->GT1                                                                         <---------ANAC46                                                                        <---------AtMYB61                                                                       <---------ZAT14                                                                      --------->ALFIN1                     ----------->GT1                                --------->ALFIN1               <-----------HVH21                                  <---------ANAC46        <---------AHL20(2)                                      --------->ZAT14         --------->ANAC58        --------->AHL20(2)                                      <---------ZAT14     --------->ANAC58       --------->AHL20(2)                                       --------->ZAT18     --------->ANAC58     <---------ARR11(3)      <---------ANAC58            ---------->DOF2--------->ALFIN1--------->ANAC58     --------->ARR11(3)      <---------ANAC58>>>>>>>>>TBF1  --------->DAG2 <---------ANAC46   gccataagatttaattctgtgagatgtgatttcgagctatttaagaagaagaagatgaagaaagagtgaagtgtgtggtgtattgtaagcacgtcttgtg  26937200                                                 <---------ANAC58                                                 <---------ANAC58                                           --------->AHL20(1)                                           <---------AHL20(1)                                          <---------AHL20(2)                                     <---                                        <---------AHL20(2)                                 --------->ZAT18                                        --------->AHL20(2)                               ------->MYC3                                        <-----------TBP                                  --------->TOE1(2)                                      <-----------TBP                                    <-------MYC2                                    <-----------TBP        --------->ARR11(3)            ------->MYC2                                    --------->AHL20(2)     <---------ARR11(3)            <-------MYC3      <---------ANAC46            <---------WOX13(1)      <---------GLK1(1)             <---------TGA1a      <---------YAB1           <---------YAB1    <---------ANAC46         <------------CBF--------->ALFIN1    <---------ANAC46      --------->MYB52(2)<---------AHL20(2)      <------------CBF    ============= <-----------RAV1(1)  <---------ZAT6<---------AHL20(2)    --------->GLK1(1)       --------->ALFIN1   tttgtgttgtgtttgtgtttttgagagttagttttgatttatatatatatttcttgtaagaaatctttagaattgggattgagagtgggaacgtgggcta  26937300                        <----------DOF2                       <---------ANAC58               <---------AHL20(2)                       <---------ANAC58             <---------AHL20(2)                <---------At4g35610            <---------MYB52(1)                    --------------->AGL15             <---------At4g35610              <----------DOF2                       <----------------         --------->ALFIN1              --------->AHL20(2)                         --------->ZAT6         <-----------RAV1(1)           <---------AHL20(2)                      --------->bZIP60(1) ------YAB1 --------->ALFIN1          --------->AHL20(2)                       <---------bZIP60(1)<-- ==================================bZIP_DOF  --------->TOE2(3)             --------->ARR11(3)   -----   tgagtgatcaagtggtgctgctcttgctttcttcaatccattaaattcctttattttatattgacatatagatgtaatatgttgtcactaattttggatt  26937400                                                                                  <---------ANAC46                          <---------ANAC46         --------->AGP1                <---------TOE2(3)     <-----------GT1    <---------ZAT14         <---------HSFB2a(2)             <-----------GT1  <---------ZAT6        --------->ZAT14         --------->HSFB2a(2)         --------->AHL20(2) -AGL3           --------->ANAC58            ------->GAMYB                  <---------AHL20(2) -------YAB1     --------->ANAC58           <------------AtMYB77   --------->ARR11(3) ---->ATHB12<-----------GT1                 --------->MYB46(3)     <---------ARR11(3)         -------   attagagtaactatttaccaagtcaatgcagtgtttttagttagtaactgccagaactatgttcagaaacatcttcaattttttacgttgaattgaaaaa  26937500                         --------------->AGL15                         <---------------AGL15                      <-----------GT1                      <---------ICU4                      --------->YAB1                     <---------ATHB12                               <---------ANAC55(1)             <-----------TGA1       <------MYB83                    --------->ANAC55(2)             <-----------HVH21      <------MYB46(1)                 <---------ANAC55(2)            <---------ANAC58       --------->MYB111(1)      ------------>AtMYB77            <---------ANAC58       --------->MYB59   --------->AHL20(2)                             -     --------->ZAT6--------->YAB1  <---------TOE1(2)--------->AHL20(2)        <-----------GT1    ---- --->DOF2   --------->ANAC46      <--------P    --------->AHL20(2)  <---------ANAC46           ------   gattacaacactatgcgtcactaatcactatatgtagtaggttgaaaccaaaaaataaaaaatcacagttacgagtttatttactaagctaagtatgcca  26937600                                                                                                    <                                                              <-----------GT1          --------------                             <---------At4g35610         <---------YAB1               <------------MYB.PH3(1)                     <---------ICU4                     <---------AHL20(2)           <---------At5g28300             <---------YAB1  --------->At4g35610        <---------AHL20(1)          --------->MYB52(1) -------->MYB52(1)   --------->ATHB12                 <---------YAB1           ------>ZmHOX2a(1)    < ----->bZIP60(2)    <---------YAB1                  <---------ICU4--------------->AtSPL8 <---------MYB52(1) ----->RAV1(1)    --------->YAB1                   --------->ICU4<----------DOF2    <-----------GT1 <   cataactgaatttttgttattgatcattggctgctaagtgctaactaagtatacttattattttttactttgtactcactcctaattaaccgtttataga  26937700  Previous    Next  AGI:  At5g67450.1    Description:  AZF1 (ARABIDOPSIS ZINC-FINGER PROTEIN 1); nucleic acid binding / transcription factor/ zinc ion binding. similar to zinc finger (C2H2 type) family protein [Arabidopsis thaliana] (TAIR:AT3G49930.1); similar to zinc-finger protein-1 [Brassica rapa] (GB:AAB53260.1); contains InterPro domain Zinc finger, C2H2-like; (InterPro:IPR015880); contains InterPro domain Zinc finger, C2H2-type; (InterPro:IPR007087) Range:  from: 26936019    to: 26937175    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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