Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                         <---------ZAT2                                                                       <---------At4g35610                                                                       --------->At4g35610                                                                       --------->ZAT2                                                                --------->GLK1(2)                              --------->ARR11(3)               --------->ARR11(3)                              <---------ARR11(3)               <---------ARR11(3)                             --------->RVE1(1)                 <---------GLK1(2)                             --------->CCA1(1)                 <---------ARR14(2)    <---------YAB1    <----------ID1             <-----------HVH21  <---------At4g35610 -------->DOF2    <---------ZAT14        --------->YAB1        --------->ARR14(2)       ------>ZmHOX2a(1) >YAB1            --------->ZAT14   <---------ATHB12         ----------->ARR10    <-----------GT1   aaaaagatgataagactctctgtagggacaaatatcccatcattcatgttctgtcacaaaaccaagattctgcagcttacttatatactccttccttctc  26901500                                                                                             --------                                                                                             <-------                                                                                             --------                                                                                             <-------                                                                                             --------                                                                                  <---------YAB1                          <---------------AGL15                  <---------ICU4   <---------AHL20(2)                   <---------AHL20(2)                    <---------ANAC46  <----------DOF2  ---------       --------->ZAT6     --------------->AGL15<-------TEIL  <------ZmHOX2a(1)  --------->YAB1 <-----   ttcttcttaccactaaaccaatttatagctaatatttgtaagggatatatacatttgtggagaggaatcaatactctcttttttataatttggaattatt  26901600  ----------->GT1  <------MYB83  <------MYB46(1) --------->MYB59 --------->MYB111(1) --------->MYB46(2) <---------------AtSPL8 >ATHB1                                                            --------->ANAC58 --ICU4                                                            <---------ALFIN1 ->ATHB51                <---------ALFIN1             ------>MYB46(1)          ------>ZmHOX2a(1) -HAHB4                 ------>ZmHOX2a(2)             ------>MYB83 --------->ANAC58           <------ ->ATHB12     --------->ALFIN1                       --------->WOX13(1)       --------->TOE2(3)  ---- >ICU4        <---------ANAC58                      --------->AtMYB61<---------ALFIN1         ------- ----YAB1     <---------ANAC58                   <-----------GT1 <---------ALFIN1            <-------   agtttggtacaaagatgtgtgtctgatccacttggactcttctcaatttttaaaccaatccattaccacacacactccctccttagactgactccctatc  26901700                                                    <---------AtMYB61                                                 <----------DOF2                         -------->P              ==============================================MADS_MADS                       <---------MYB52(2)        <---------------AGL15                       <---------MYB111(1)      <---------ANAC58                       --------->MYB46(3)       <---------ANAC58               <----------DOF2 ---ARR14(2)      --------->bZIP60(1)      --------->ATHB12            <---------TOE2(3) ----------->AtSPL8<---------MYB59   <---------ANAC58           <--------P     --------------->AGL15 -->ARR14(2)      --------->TGA2(1)  <---------ANAC58     <--------P   <---------TOE1(3)   --------->GLK1(2) --CCA1(2)        <---------bZIP60(1)<---------ANAC46   <---------MYB46(3)     ======================   ttgtactctccattagaatgacataactaccctgttctgtcttgttcattgcttttggtggtaagggtagtttatggttttctttgtttggagaatttga  26901800                                                                                           --------->ANAC58                                                                                           --------->ANAC58                                                                                           <---------TGA1a                                                                                           --------->O2                                                                                           --------->ANAC55(2)                                                                                          *TSS                                                                                      <---------ANAC55(2)                                                                                      --------->ANAC58                                                                                      --------->ANAC58                         <---------YAB1                                               --------->ANAC55(2)                       --------->YAB1                                 ===============================bZIP_DOF                      --------->ICU4                                  <---------------AGL15--------->TGA1a                   --------->ICU4                        ------>ZmHOX2a(2)            --------->ANAC46              <------MYB46(1)                          --------->ARR11(3)           --------->MYB52(1)              <------MYB83--------->YAB1           <---------ANAC58   --------------->AGL15--------->bZIP60(2)             --------->MYB59---------->DOF2        <---------ANAC58   <----------DOF2--------->RAP2.6(3)           <---------MYB52(1)       <------ZmHOX2a(1)  <---------ARR11(3)     -----------------------   <----------DOF2------------>CBF  ============================HOX2a_HOX2a <---------------AtSPL8 =====================================================================================MADS_MADS   gttctctttttctgtttggtcacaattatcaaaagagaggaagaagctcattttcttgatcttattctctctcttttagtagtacattacggcacgtctt  26901900                                                                                                  <--                                                                                                 ----                                                                                                 ====                                                                                                =====                                                                                                <----                                                                                                <----                                                                                               ------                                                                                               ------                                          <---------ANAC46                                     <-----                                          <---------ANAC58                                     ------                                          <---------ANAC58  <---------ZAT2                     <-----                                      <---------ANAC58      --------->ZAT2                 ----------                                      <---------ANAC58      <---------At4g35610     ---------->DOF2                              --------->At5g28300           --------->At4g35610   <---------At4g35610         <------ZmHOX2a(1)   ----------->GT1   ---------->DOF2                    --------->At4g35610 >TaNAC69(2)         <---------ZAT6 --------->ARR11(3)--------->TOE1(2)       <-----------HVH21<-----   cttcatgagaaggacttgaaatagtgttccatggtgaatttcttgagtgaaaagaaactgcgagctaagtgttcgtaatatgtcagcaaagaagaaagat  26902000         <---------ZAT2         --------->ZAT2         --------->At4g35610         <---------At4g35610 --------DOF2 -->ZmHOX2a(2) ============HOX2a_HOX2a ============HOX2a_HOX2a -----RVE1(1) --ZmHOX2a(2) --->ARR14(3) --->ARR14(2) ----ARR14(2) --->ARR11(3)   ---------->DOF2 ----ARR11(3) --------->YAB1                                                               ------>ZmHOX2a(1) >DOF2------>ZmHOX2a(1)              <---------AHL20(2)                                  ------------ ----ARR14(3)<---------YAB1    ----------->GT1                                    <-----------GT1   cttttgtcctcagctatgaaaagaaccagtgaatggttttttattctcttcataagattattttgtttctcaatccattttttgtttccagtcctgaagt  26902100                                                                  <---------At5g28300             <--                                                                 <-----------GT1                  <--                                                                ----------->HVH21                 ---                                                               <-----------HVH21              <------                 <----------DOF2                              --------->TGA2(1)        <-------TEIL          --------->YAB1                                      --------->bZIP60(1)   <---------HSFB2a(1)         <---------YAB1              <---------GLK1(1)        <---------bZIP60(1)   <---------HSFC1(2)       --------->YAB1 <-----------GT1--------->GLK1(1)        <---------TGA2(1)     --------->HSFC1(2)   ----------->GT1 <---------ICU4  <------ZmHOX2a(1) --------->ARR11(3)        <------ZmHOX2a(1)----- ----->AGL2 <-----------GT1     <---------LBD16      --------->GLK1(2) <-------TEIL --------->HSFB2a(1)   agaaatcgtttataatactctttattacatcgtttcaggatttcttctcaagaagtatctagtgatgtcaccgttcatgtaggagaagcttcgttttcac  26902200                  ------>ZmHOX2a(2)                 <------ZmHOX2a(2)       <-------TEIL                                         --------->ICU4          <---------MYB46(3)      <--------P--------->AGP1                            <---------bZIP60(1)      <---------MYB52(1)   --------->ANAC58                                       --------->bZIP60(1)     <---------MYB52(1)   --------->ANAC58              --------->WOX13(1)    ----------->HVH21     <---------ARR14(2) -------ZAT18   <---------AGP1 <------ZmHOX2a(2)       <---------ATHB12      <---------GLK1(2) -------ZAT14   --------->ARR11(3)               --------->ANAC58            --------->ARR14(2) ------>ZAT14   --------->ARR14(2)               --------->ANAC58     <---------ANAC58 -----GT1       <---------ARR14(2)             ---------->DOF2        <---------ANAC58            --- ---->ANAC46    <---------ARR11(3)    XXXXXXXXXXXXXXXXXXXX>MIR859    <-------TEIL <-------GAMYB  <---   tgcacaaggtagattatagatctgtatttagcgatcaatctctctgatgtaaagccaatgacatgatcacattcgtgccgattcggttgttttctctctg  26902300                                                                         >>>>>>>>>>>>>>>>>LFY                                                                       <---------GLK1(2)                                                               --------->ICU4                  <-----                                                          --------->AtLEC2                     <-----                                                          --------->ANAC58                     ------                                                  <---------ANAC46    <---------At4g35610      <-----                                                  --------->ETT(1) <-------TEIL                ------                                      --------->ANAC58    --------->ANAC58               --------->CCA1(2) ---->TEIL               <-----------RAV1(1)   <-----------RAV1(1)--------->CCA1(2)     <---------ARR11(3) ------CCA1(2)<---------ATHB12        --------->ANAC58   --------->WOX13(1)         --------->YAB1   aatcttgcagtttccactcatgtcaaaatgtgggtttatcaagaaacttgtgtcggaatcaagcaaagattcagattccactgttatcaagataccagat  26902400  Previous    Next  AGI:  At5g67385.1    Description:  signal transducer. similar to phototropic-responsive protein, putative [Arabidopsis thaliana] (TAIR:AT3G49970.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN71562.1); contains InterPro domain NPH3; (InterPro:IPR004249); contains InterPro domain BTB/POZ fold; (InterPro:IPR011333); contains InterPro domain BTB/POZ-like; (InterPro:IPR000210); contains InterPro domain BTB/POZ; (InterPro:IPR013069) Range:  from: 26901890    to: 26904430    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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