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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                                    ----------->TGA1
                                                                  <---------At4g35610
                                                                  <---------ZAT2
                                                                  --------->At4g35610
                                                             <---------ANAC46
                                                             <---------ANAC58
                                                             <---------ANAC58
                                                          --------->ALFIN1
                                                         <-------MYC3
                                                         ------->MYC3
                                                         <-------MYC2
                                                         ------->MYC2
                                                         <-------PIF5
                                                         ------->PIF5
                                                        <---------ANAC58
                                                        =====================================MYC_MYB
                                                        <---------ANAC58                  --------->ANAC46
                                        ==========================bZIP_DOF   <---------ANAC58
                            <------MYB83---------->DOF2 <---------TGA1a      <---------ANAC46
                            <---------ANAC46            <---------ANAC46     <---------ANAC58
                            <------MYB46(1)             <------NtERF2--------->MYB52(1)   --------->ANAC58
                            <---------ANAC58            --------->ALFIN1    <-------TEIL  --------->ANAC58
                            <---------ANAC58           ------>NtERF2----------->HVH21------->GAMYB
                            ----------->GT1           <---------ANAC58    <---------ARR14(2)
   <----------DOF2         --------->MYB55(2)         <---------ANAC46    <---------GLK1(2)        -
   <---------------AGL15   <---------MYB46(3)         <---------ANAC58 <---------ANAC46 <---------ALFIN1
   --------------->AGL15  <---------MYB55(1)     --------->ATHB12 --------->ZAT2    --------->MYB46(3)
---YAB1                  <---------MYB52(1) --------->ALFIN1<------NtERF2 --------->ARR14(2)       <
 
aggtgtctttatgtagtagtagtaaaccgttgggtgaaacagtgaaagtggatgatggcgcgtggcgagagctgacggattcgtgtaacccccaggccaa  26878600
                                                       <-----------HVH21
                                                      --------->bZIP60(2)
                                                      --------->ANAC46
                                   <---------YAB1     --------->TGA1a             <---------YAB1
                                 <---------AHL20(2)   <---------TGA1a        <---------ICU4
                                 --------->AHL20(2)   <---------O2           --------->YAB1        <
------->MYC3                    <---------AHL20(2)    --------->O2          <---------ATHB12       -
<-------MYC3               =====================================bZIP_DOF    --------->ICU4     <----
-------->ANAC55(1)         <---------DAG2           <---------ALFIN1      --------->YAB1       -----
---------ANAC55(2)         <----------DOF2<-----------GT1         <---------AHL20(2)   --------->AHL20(2)
 
acacgtttctacttctacttaacccattccctttatttatttttgtttctgttcaccacgtcgcattttttaatctgtaatcatcaccattaatatggtc  26878700
     ----------->GT1                   <------ZmHOX2a(1)
 ------>MYB46(1)                 <---------ANAC58                                     <-------MYC3
 ------>MYB83                    <---------ANAC46                                     <-------MYC2
---------MYB59              <----------DOF2                                           ------->MYC2
-------->AtMYB61     ----------->RAV1(1)                                              ------->MYC3
-----ETT(2)   <---------ANAC58   <---------ANAC58                                    --------->ANAC46
---->ETT(2)   <---------ANAC58 <---------ANAC46                                  <-----------GT1  --
 
gaccaaactagtaatttccttgagcaccatacttttgtgtgaggataatgagactcccaagaagaagactcgataatccccaagttacacgttctctcga  26878800
                                                                       --------->YAB1
                                                                 <---------bZIP60(1)
                                                                 --------->bZIP60(1)
                                                                 <---------ANAC58
                                                                 --------->ANAC55(2)
                                                                 <---------ANAC55(2)
                                                                 <---------ANAC46
                                                                <------NtERF2
                                                            --------->bZIP60(1)
                                                            <---------bZIP60(1)
                                                            ========================================
                                                            >>>>>>>>>>AtbZIP1
                                                            <---------ANAC58
                                                            <---------bZIP60(2)
                                                            <---------O2
                                                            --------->O2
                                                            <---------ANAC58
                                                            <---------ANAC46
                                                            --------->TGA1a
                                                            <---------TGA1a
                                                          <---------TGA2(2)
                                      <---------ARR14(2) ----------->TGA1                       ----
                                      --------->ARR14(2) ----------->HVH21<------------CBF  <-------
       <-----------ARR10   <---------At5g28300     <---------YAB1<---------ANAC58     ----------->GT1
------->ATHB12            <-----------GT1    <---------ALFIN1 --------->ALFIN1     --------->MYB52(1)
 
cttattgacaaatctatccctgcgcttatttaccattcacatatactgccacttcttattctgacgtggcgtaatagtattggataaaacggtattatct  26878900
                                                                                 --------->AtMYB61
                             ----------->RAV1(1)                              --------->AtMYB61
                            <----------ID1                                    --------->DEAR3(1)
                          --------->ANAC58                                    <---------ALFIN1
                          --------->ANAC58                                 <---------ALFIN1
                         --------->DAG2                                   --------->At4g35610
                     ----------->TBP                                      <---------At4g35610
                   <---------AHL20(2)                            --------->ZAT14 <---------ALFIN1
                   ----------->TBP                   <---------ARR11(3)   <---------ZAT2
=====MYC_MYB       --------->AHL20(2) --------->At4g35610       <----------DOF2 --------->MYB46(3)
---->P           ----------->TBP---------->DOF2      --------->ARR11(3)   --------->ZAT2
----GT1   --------->YAB1---------->DOF2             *TSS   <-----------HVH21 --------->MYB46(3) <---
 
acccctaagtcgattatagtatatatataaagcaacaaagcagttgcaaatttcaagatagtcgtcactttagtcgcagcaccaccaccaatttcgaatt  26879000
                                     --------->LBD16
                                    --------->LBD16
                                   <---------LBD16
                                  <---------LBD16
                                 --------->MYB52(1)
                               --------->ARR14(2)
                               ----------->HVH21
                               <---------ARR14(2)
                              <-----------HVH21
                              <-------GAMYB
                              --------->At5g28300
                             <---------DEAR3(2)
                             <---------MYB46(3)
                            <---------DEAR3(1)                        <---------MYB52(1)
        --------->GLK1(1) ------------>AtMYB77   <------NtERF2       <-------GAMYB
        <---------GLK1(1)<---------DEAR3(1)    --------->ETT(1)    --------->SPL7
  <---------ARR14(2)   --------->GLK1(2)       <---------ANAC46  <---------SPL7
 <---------GLK1(1)     <---------ARR14(2)    <-----------HVH21  <---------ANAC58           <--------
--------GT1            --------->ARR14(2)   <-----------RAV1(1) <---------ANAC58     <------ZmHOX2a(1)
 
tagcatttctgaattccgactctgagaatcggcggttaccgggaaatatgtcggagactgatagagagcgtccgttattagcatcggaggagagagctta  26879100
                  --------------------->WRI1
                 --------->YAB1                                     --------->ARR14(2)
                <---------YAB1                                      <---------GLK1(2)
             <---------ARR11(3)                                     <---------ARR14(2)
             --------->ARR11(3)                                   --------->LBD16
           <---------HSFC1(2)                                    --------->ANAC46
           --------->HSFC1(2)                                    --------->LBD16
           <---------HSFB2a(1)                                  <---------LBD16                -----
         ---------->DOF2                                   --------->WRKY12         <---------YAB1
  --------->MYB52(1)        --------->DEAR3(2)             --------->WRKY38(1)  <---------GLK1(2)<--
-At4g35610 --------->HSFB2a(1)       >>>>>>>>>TBF1         ----------->HVH21 ------>ZmHOX2a(1) <----
 
tgaagaaaccgagaaagttctcatagtcggaatcgacgaagaagaagacgctgattacgacgatgaccccggaaactctcctaaattctcatggaagaag  26879200
                                                  --------->ANAC46
                                                 --------->LBD16
                                                <-----------RAV1(2)       <---------ZAT2
                                              <------ZmHOX2a(2)           --------->ZAT2
                                             --------->ARR14(2)     ------>ZmHOX2a(2)
                                          =================================HOX2a_HOX2a
       <-----------GT1                    ================================HOX2a_HOX2a            <--
---->HSFC1(2)                             ------>ZmHOX2a(1)        <------ZmHOX2a(2)     <---------MYB46(3)
--------DOF2                         <----------DOF2              --------->ARR11(3)    <---------TOE2(2)
-----HSFC1(2)------->TEIL<---------At4g35610 <---------ARR14(2)   <---------ARR11(3)    <---------TOE1(2)
 
ctttggctattcactggacctggttttctgatgagtatcgctttcctcgatccaggtaatctcgagagcgatcttcaagctggagccatcgctggttact  26879300
                                                                                    ----------->RAV1(2)
                                                                              <--------P
                                                                              ======================
                                                                           <---------MYB46(3)
                                                                         --------->ATERF1(1)     <--
                            <-------GAMYB                                <------NtERF2<-----------RAV1(1)
                           <---------MYB46(3)                           ------>NtERF2 ----------->HVH21
                       <---------DEAR3(1)                              <---------DEAR3(1)  <------NtERF2
                      --------->SPL7                                   ----------->HVH21 <---------ANAC46
                     <---------ATERF1(1)                               --------->ETT(2) <---------LBD16
                 --------->ZAT18                  <---------CCA1(2) --------->ALFIN1--------->At4g35610
--------->ATHB12--------->ALFIN1      <---------YAB1              --------->ALFIN1  <---------At4g35610
--------DOF2  <-----------RAV1(1)   <---------At4g35610   --------->ANAC46<---------ANAC46--------->LBD16
 
ctttgatttggctattgatgtgggctacggcgattgggcttctgattcaacttctatctgcccgtctcggtgtggcgacgggtagacatctggcggagtt  26879400
                <---------TGA1a
            ----------------->AGL1                                --------->At4g35610
            <-----------------AGL1                                --------->ZAT2
          <---------ARR14(2) <------MYB46(1)            <----------DOF2
          --------->GLK1(2)  <------MYB83              <---------ANAC46            --------->ATHB12
          --------->ARR14(2)<---------AtMYB61   <------NtERF2     <---------ZAT2  --------->ARR11(3)
 --------->HSFB2a(2)    --------->ANAC58       --------->LBD16    <---------At4g35610
 <---------HSFB2a(2)    --------->ANAC58      <---------ANAC46------>ZmHOX2a(2)  <XXXXXXXXXXXXXXXXXX
<---------ANAC46=============================bZIP_DOF  <---------ANAC58       <------ZmHOX2a(1)
==========================MYC_MYB <----------DOF2      <---------ANAC58    <---------LBD16  <-------
-------ANAC46   <---------O2--------->ALFIN1 <---------LBD16  =======================HOX2a_HOX2a
 
gtgtcgagaagagtatccgacttgggcaaggatggtgctttggattatggcggagattgctttgatcggagctgatattcaggaagttattggtagtgct  26879500
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AGI:  At5g67330.1   
Description:  ATNRAMP4 (Arabidopsis natural resistance-associated macrophage (NRAMP) protein 4); manganese ion transmembrane transporter/ metal ion transmembrane transporter. Identical to Metal transporter Nramp4 (NRAMP4) [Arabidopsis Thaliana] (GB:Q9FN18;GB:Q9SNV8); similar to NRAMP5 (NRAMP metal ion transporter 5), metal ion transmembrane transporter [Arabidopsis thaliana] (TAIR:AT4G18790.1); similar to NRAMP3 (NRAMP metal ion transporter 3), manganese ion transmembrane transporter/ metal ion transmembrane transporter [Arabidopsis thaliana] (TAIR:AT2G23150.1); similar to NRAMP2 (NRAMP metal ion transporter 2), metal ion transmembrane transporter [Arabid
Range:  from: 26878953    to: 26881123    Orientation: Forward
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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