Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                         --------->MYB52(1)              <---------DEAR3(1)             <---------LBD16         --------->ARR11(3)         <---------ARR11(3)        <---------GLK1(1)        --------->GLK1(1)        --------->CCA1(1)             ------>NtERF2       --------->At4g35610        <---------CCA1(1)           --------->At4g35610   <---------ZAT2        <---------RVE1(1)     --------->ATERF1(1)         --------->ZAT2        --------->RVE1(1)   <---------ANAC46              <---------At4g35610       --------->ARR11(3)   <---------DEAR3(1)       --------->SPL1(2)             <-----------GT1       <---------ARR11(3)  <---------LBD16         <---------SPL7               <---------REM1(1)     --------->ANAC58 --------->ARR14(2)         --------->LBD16    --------->MYB46(3)     --------->ANAC58 <---------ARR14(2)        <------------------SPL14  --------->ALFIN1 ---------ZAT18     ----------->ARR10--------->ANAC46--------->SPL7-------->P<---------MYB46(3) ----------ARF1    <------NtERF2   <---------ATERF1(1)--------->ANAC46  <---------ANAC58 ---------ETT(2)  ------>NtERF2   <---------DEAR3(1)--------->SPL1(1)   <---------ANAC58 ------->ALFIN1  <---------ANAC46--------->ATERF1(1)<---------SPL1(1)--------->TOE2(2) -----DEAR3(1)--------->ANAC46<------NtERF2    ------------------>SPL14 <---------ANAC46            -   ggtggacaagatatctacggcgcagaaacggcggagtctgcgccaatgctccccgtacggagctgtgctaaccagcgtgttgttgtaacccatgtattca  26873800                                                                          --------->TGA1a                                                                          <---------bZIP60(1)                                                                          <---------O2                                                                          <---------TGA1a                                                                          --------->bZIP60(1)                                                                          =================MYC_MYB                                                                        <---------TGA2(2)                                                                       ----------->HVH21                                                                       ----------->TGA1                                                               --------->At4g35610                                                               ----------->RAV1(2)                                                               <---------ZAT2                                                               <---------At4g35610                                                               --------->ZAT2                                                             <-----------RAV1(2)                                                            --------->LBD16        <---------ALFIN1                                                          <---------LBD16<---------TOE2(3)                                                         ------>ZmHOX2a(1)--------->O2--------->DEAR3(1)                 <-------GAMYB                      <---------GLK1(1)<---------At4g35610              <---------ANAC58                      --------->GLK1(1)--------->ZAT2--------->AtMYB61              <---------ANAC58                     --------->ARR11(3)--------->At4g35610       <---------ANAC58                            <---------ARR11(3)<---------ZAT2------->GAMYB       <---------ANAC58                        --------->CCA1(2) ----------->HVH21<---------MYB52(2) <---------TOE2(3)   <------NtERF2      --------->At4g35610 <---------At4g35610   <---------MYB55(2) --------->DOF2 <-----------RAV1(1)     <---------At4g35610--------->ANAC46       --------->MYB46(3)   gttaaagtagcgagaggcctgttggcgaaaacaacatcgttttgctgagataagaactcctccgcagctgaagctgacgttacaaccaccgctcgacgag  26873900                                                                                                  ---                                                                                               ------                                                                      <----------DOF2        <------ZmHOX2a(2)                                                                    <-------TEIL           --------->At4g35610                  --------->O2                                     <---------ARR11(3)  <-----------HVH21                  --------->ANAC46                                <---------GLK1(2)   --------->ALFIN1                  <---------O2      <---------HSFB2a(2)     <---------ZAT14        <---------AtMYB61           <---------KAN4(2)        --------->HSFB2a(2)   --------->At5g28300   --------->ALFIN1<----       <------NtERF2            <---------ARR14(2)       ----------->GT1 <---------HSFB2a(2) ========      --------->LBD16       ------>NtERF2             --------->MYB52(1) --------->HSFB2a(2)<--------    <---------LBD16      ------>NtERF2     <-----------HVH21--------->ZAT14  --------->DAG2<---------At4g35610   agcctagccggagaataaacacgtcgatgccgaggtttcgagagaggtcacgaagggaacggtgaacaggttctttgagaaggtggaggtgtccgatcac  26874000                                                                 <---------ATHB12            <---------ARR14(2)                               --------->ZAT14       ------>MYB46(1)                                   <---------ALFIN1       --------->MYB52(1)                             --------->ANAC46       ------>MYB83 --------->At5g28300               --------->ANAC58  --------->LBD16       -------->P   <------NtERF2                     --------->ANAC55(1)------>NtERF2 ------>LBD16      ----------->GT1                    --------->ANAC58<---------LBD16 --->MYB52(1)     <---------ANAC46                 --------->TOE1(2)--------->ARR14(2) -----LBD16 --------->ARR14(2)       <----------DOF2 --------->SPL7 <---------ARR14(2)             -- =================HOX2a_HOX2a   <---------At4g35610--------->TOE2(2)------->TEIL                 <--- ---HVH21  <------ZmHOX2a(1) <<<<<<<<<TBF1 ------>ZmHOX2a(2) <---------ZAT14            ----------->GT1   cggaaaacctacaggatttggcggtaaattcttcttctgctttgatcggaaaacatacgccactgcaatgaatccggccatgagagcgagtagaaacaaa  26874100                                                                                                -----                                                                                            ---------      ----------->HVH21                                                                     ---------    <---------At4g35610        <---------HSFB2a(2)  <---------HSFB2a(2)                    <---------YAB1    --------->At4g35610        --------->HSFB2a(2)  --------->HSFB2a(2)                   <---------AHL20(2)  --------->YAB1              <---------LBD16      <---------LBD16                        --------->AHL20(2)  <---------ICU4       --------->ANAC55(1)      <---------GLK1(2)                         --------->AHL20(1) <---------ATHB12      --------->ANAC46       <---------YAB1----------->GT1              --------->YAB1 ------->WOX13(1)      <---------ANAC55(2)   <---------TOE2(2)     *TSS --------->MYB52(1)<---------AHL20(1) ------ATHB12          --------->ANAC55(2)   <---------TOE1(2)     --------->AHL20(2)   <---------YAB1   tcaatcatctcacccattcgtgaacacataattctggagactagtcgcatgattctggagagtagtcaaaaaaataccagaggtctcactattataatat  26874200                                                                          <------NtERF2                                                                     <------MYB83                                                                     <------MYB46(1)                                                                    --------->ALFIN1                          <---------ZAT18                          <<<<<<<<<MYB98                          --------->ZAT18                          --------->ALFIN1                --     --------->At4g35610<---------------AtSPL8 ----------->GT1     <--------P                   <----    ------------------------>ANAC81  <---------HSFB2a(2)          <---------ANAC58          <-------- ---->CCA1(2)    ---------->DOF2     --------->HSFB2a(2)          <---------ANAC58       <----------- >AHL20(2)  ---------->DOF2       <---------AGP1                <---------MYB46(3)     --------->ARR11(3) >YAB1----------->GT1---------->DOF2<---------LBD16   --------->AHL20(2) ----------->GT1--------->ATHB12   acgagggagcgaaaaaaagaaaagaaagtgtacatagttctggagagactagtcaaaaatatacgatgggttgggccgaaaaatatgaagttattggtta  26874300                                                                       <---------ARR11(3)                                                         <---------ANAC46                                                      <-----------RAV1(1)                        --------->ATHB12          <---------DAG2       --------->ARR11(3) ------->ATHB12  --------->GLK1(2)        <---------TOE1(3)   <------------CBF --------CBF --------->TOE2(3)          ---------->DOF2  --------->ETT(1)       *TSS             <--- -MYB46(3)   --------->YAB1  <------MYB83 <---------TOE2(3)<------NtERF2   <---------ANAC55(2)   ---- -CBF       <---------YAB1   <------MYB46(1)      <----------DOF2     --------->YAB1----------->GT1   ttgataggcccattacgataatctagtgatttggttacccagtaaaggtttactttttgtcggagattgcaaatatcatgtgagaagagtttataatctc  26874400               <------NtERF2              ------>NtERF2        <----------DOF2             ----------->HVH21  <---------ARR11(3)             <---------DEAR3(1) --------->ARR11(3)                          <---------ARR14(2)     <----------DOF2           --------->GLK1(1)                            --------->ARR14(2)  --------->ARR11(3)           <---------GLK1(1)                           <------ZmHOX2a(1)  <---------ARR11(3)           <---------At4g35610                  <---------TOE2(3) --------->GLK1(1)        <---------LBD16                           <---------TOE1(3) <---------GLK1(1)   <---------ANAC58                              ---------->DOF2 ------HSFB2a(2)     <---------ANAC58              ----------------->AGL3--------->MYB59 <---------At4g35610 ----->HSFB2a(2)  <---------MYB52(1)            ---------->ID1    <---------AHL20(2) --------->ALFIN1   gagaaatctttttgggcgacgttgtttgctcggagctctttctccgatttgtctccattttcggtgatttaaagttaggatttggctgtggagatgtctt  26874500                                                 --------->MYB59                                                 <---------------AtSPL8                                                 <---------------AtSPL3                                                <-----------RAV1(2)                                            <------ZmHOX2a(1)                                 -------                                         <---------LBD16                                   ----------                                    --------->ARR11(3)                                  <---------AHL20(2)                                    --------->ARR14(2)                                <---------RVE1(1)                                   <---------CCA1(2)                                 <---------ARR14(2)                                   <---------GLK1(1)                                 --------->ARR14(2)        --------->LBD16            --------->GLK1(1) <-------TEIL                    <---------GLK1(2)    --------->TOE2(2)             <---------MYB52(1) --------->SPL7 <----------DOF2--------->LBD16  -------->P         <-----------GT1<---------ARR11(3) ----------->GT1           <---------LBD16 <---   cacttacctccgtcgaattgaattttctggttttccgatatcttcaggaatcaggtacgataaatatagactttctatgttctcgcggatttttttgtac  26874600                            <---------At4g35610                          <--------P                         <---------MYB52(1)                                  <---------ANAC58                        --------->LBD16<---------TOE2(3)                     <---------ANAC58 --->ID1               <---------HSFB2a(2)                             <-----------RAV1(1) ----->AtSPL8          --------->HSFB2a(2)<---------ARR14(2)        <-----------RAV1(1) -------DOF2          <---------LBD16  <---------TOE1(3)        <---------YAB1           ------->TEIL   ttttgtttttgaatttgtatgtgttccggtagctactggctgaggttttggatttgatttcgaattgtgaatgttgttgccttgttctacgaatttagaa  26874700  Previous    Next  AGI:  At5g67310.1    Description:  CYP81G1 (cytochrome P450, family 81, subfamily G, polypeptide 1); oxygen binding. similar to CYP81D1 (CYTOCHROME P450 91A1), oxygen binding [Arabidopsis thaliana] (TAIR:AT5G36220.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71949.1); contains InterPro domain Cytochrome P450, E-class, group I; (InterPro:IPR002401); contains InterPro domain Cytochrome P450; (InterPro:IPR001128) Range:  from: 26872442    to: 26874167    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g67320.1    Description:  WD-40 repeat family protein. similar to TAF5 (TBP-ASSOCIATED FACTOR 5), nucleotide binding [Arabidopsis thaliana] (TAIR:AT5G25150.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71955.1); contains InterPro domain WD40 repeat-like (InterPro:IPR011046); contains InterPro domain WD40/YVTN repeat-like (InterPro:IPR015943); contains InterPro domain LisH dimerisation motif, subgroup (InterPro:IPR013720); contains InterPro domain WD40 repeat (InterPro:IPR001680); contains InterPro domain LisH dimerisation motif (InterPro:IPR006594) Range:  from: 26874380    to: 26878345    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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