Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100            <---------AHL20(2)         --------->AHL20(1)               ----------->GT1         <---------ARR11(3)             ---------->DOF2         <---------AHL20(1)      <---------AtLEC2                                                   <         <---------AHL20(2)  --------->CCA1(2)                               --------->MYB52(2)     -         --------->AHL20(2) <---------ARR14(2)                             <---------MYB52(1)       < ->YAB1  --------->ARR11(3) --------->ARR14(2)                 <-----------GT1       --------->ALFIN1   aactcttgaaatatatttgaaatgctaagagatttgcatatcaaaagttaatctagtctagatttatactatacctcgttagtgaaggtgtttccatgag  26806600             --------->ANAC46          <---------ARR14(2)          --------->ARR14(2)          <---------ZAT14          --------->ZAT14                                  <-----------GT1            ------>ZmHOX2a(1)  <-------TEIL                                       <---------ICU4         --------->HSFB2a(1) --------->CCA1(2)                                  <---------YAB1         <---------TOE1(2) ---------ARR14(2)                                  --------->ICU4     <---------HSFB2a(2)       <--- -------->ARR14(2)                  <---------GLK1(2)--------->ATHB12  --------->HSFB2a(2)     <----- ---------ARR11(3)      <---------TOE2(3)        ------------>ATHB5 ------>ZmHOX2a(1)--------->TOE2(3)   aagatacatctgtatactctactactgatgttgtttcagattgttcatcgttccatgattgtaacgagtcctgctcgaacgttgtttcctaaacaatttt  26806700                       <---------AHL20(2)                       <---------ICU4                       --------->AHL20(2)                       --------->ATHB51                      --------->AHL20(2)                      <---------AHL20(2)                      <---------AHL20(1)                   --------->AHL20(2)                           ------>MYB83                   <---------AHL20(1)                           ------>MYB46(1)          --------->LBD16                   <---------AHL20(2)                         --------->MYB46(3)     --------->ARR14(2)                   --------->AHL20(1)                         <---------MYB59        <---------ARR14(2)         <---------AHL20(2)                                  --------->ANAC46<-----------RAV1(2)    < ------AtLEC2     --------->AHL20(2)                    <---------ICU4      ------>ZmHOX2a(1)<------- ------GT1        <---------AHL20(2)      --------->TOE2(3)<-----------GT1<-----------------AGL1    -   catgtctatattatatccaaataaattatttctcttaaaaaaaacattagataatagataattacccaactaattgtcctcagaagggaaccgggctcta  26806800              <-----------HVH21                <---------At4g35610      --------->AtMYB61                 <---------At4g35610    --------->SPL7                      --------->At4g35610  <---------SPL7                 ------>ZmHOX2a(2)                               ------>ZmHOX2a(2)  --------->LBD16              --------->ARR14(2)                               <------ZmHOX2a(2) ---------LBD16                <---------AGP1  --------->At4g35610             --------->ARR11(3) ---DOF2 <---------ALFIN1      --------->ARR11(3)                              <---------ARR11(3) -------------->AtSPL3         <---------ARR14(2) --------->At4g35610 <-----------HVH21   ttgccggaccatcaccgttcacatcaagcgttggatctggtgagatgtcatcagcatcaactggtgagtaagtgtcccatagatcccagtcgtctccaaa  26806900                                                                                              <------                              <---------CCA1(2)                                   ----------->HVH21                             <---------MYB52(1)               <----------DOF2    <---------MYB59                            --------->LBD16             ------>ZmHOX2a(2)       --------->At4g35610                          <---------LBD16               <-------TEIL            --------->ANAC55(2)                ---------->DOF2                        <------ZmHOX2a(2)        <---------ANAC55(2)           ------->TEIL <---------ARR14(2)            --------->ARR14(2)        ----------->RAV1(2)      --------->O2  <------ZmHOX2a(1)                 <---------ARR14(2)      <-----------GT1<-------    ----------->RAV1(1) --------->ARR14(2)       <---------MYB52(1)       --------->AHL20(1) --------   tagtagccacatgaagctaaaaggactatccggtatctcagaattgtcttcgtttggatccatacttttggagaaacatattacctgactcaaaattttt  26807000                                                                                                    <                                                                                              -------                                                                                              -------                             ----------->GT1                                                  <------                        <-----------TBP                                                    <---------ANAC58                        <---------AHL20(2)         <---------YAB1                          <---------ANAC58                        --------->AHL20(2)       --------->YAB1                            <---------ANAC46 ---AHL20(2)          <-----------TBP     <----------DOF2        --------->ZAT6     --------->ARR14(2) --AHL20(2)     <---------At4g35610    --------->ZAT6          <-----------GT1      <---------ARR14(2) ->AHL20(2)     --------->At4g35610  <-----------GT1--------->YAB1       --------->AtLEC2 --------->ATHB12   tttcaaggggctagattaagctgaatttatatagataattaacactttcaagtatcatcaccatttaactcttccattcaaatgcaaatacttgagtgga  26807100                                                                                    ---------->DOF2                                                                            --------->At4g35610                                                                            <---------At4g35610               --------->YAB1                                           <---------REM1(1)           <      --------->TOE2(3)                                               <------------CBF          -----     <---------ZAT6                                                 --------->AHL20(2)          ----- --------->ARR14(2)                                                 --------->ARR11(3)         ------ <---------ARR14(2)--------->DAG2                                   <---------ARR11(3)         <----- ------ZmHOX2a(1) ---------->DOF2      <---------------------WRI1   --------->AHL20(1)        ------- -->ZAT18   <---------ICU4         ---------->DOF2                  <---------AHL20(2) ----------->GT1 -->ZAT14   <------------CBF  --------->AHL20(2)  ---------->DOF2   <---------AHL20(1) <----------ID1 ---ZAT14 <---------YAB1  ----------->GT1    <---------YAB1        --------->AHL20(2) <---------TOE2(3)   caggatagtcttaatattgataaagtaatagaaaaaataaagacgttatgaacaaagaaaaaccactaaatatattgtagctcagttaaaggaaaaatat  26807200          <---------TOE1(3)          <---------TOE2(3)     ------>MYB83                          <----------DOF2     ------>MYB46(1)                     ------>MYB83   <---------MYB59                       ------>MYB46(1)                                    --------- -----------GT1                         <---------ALFIN1                                   <---------TOE2(3) ------>TBP                            ------->GAMYB                                ----------->GT1 ---->AHL20(2)                       --------->ANAC46                              <---------TOE2(3) --->AHL20(1)             <---------AHL20(2)                                       <---------TOE1(3) ----AHL20(1)             <---------ATHB51 <---------DAG2       ---------->DOF2<----------DOF2 -->AHL20(2)        ----------->GT1 <-----------GT1   ------>NtERF2 <------ZmHOX2a(1)<------ZmHOX2a(1)   atataccaaattaaggcttaaacgataaataatgcatataacccacttttcagtgcctccatggataaaaggatttagcaactttaaggaaaaaaggttt  26807300                                                  --------->MYB111(1)                                                 <--------P                                               <---------ANAC46                                               <---------ANAC58                                               <------MYB46(1)                                               <------MYB83                                              <---------MYB46(3)                             --------                                              --------->MYB55(2)                       --------->AHL20(1)                                              --------->MYB59                          --------->AHL20(2)                                          <-----------RAV1(1)                          <---------AHL20(2)                                    <-----------GT1                               --------->YAB1  ---                                  <---------WOX13(1)                           --------->WOX13(1) <--                               <---------ATHB12<---------ANAC58     ----------->GT1   --------->AHL20(2)        --------->DAG2     --------->ZAT18<---------MYB46(3)        --------->TOE2(3) <---------AHL20(2) -->GT1---------->DOF2---------->DOF2 <---------YAB1               ----------->GT1--------->AHL20(2)   ataccaaaaaaaagttcaaggagaaaaagaccactgatttacaattgttgggtagtttgaagtcccaaaatgttaaaaattcaattaaaaaaattgtgac  26807400                                                                    <---------ICU4                                                                    -------->HAHB4                                        --------->AHL20(2)          --------->YAB1                                        <---------AHL20(2)         <---------YAB1                                    <---------AHL20(2)          --------->AHL20(2)     <---------AHL20(2)            --------->AHL20(2)   --------->GLK1(2)    --------->AHL20(2)           <---------ARR11(3)    <---------ARR14(2)    --------->YAB1      <---------GLK1(2)              --------->ARR14(2)   <---------------AGL15<---------ARR14(2)             <---------GLK1(2)  <-----------------AGL3--------->ARR14(2)            <------ZmHOX2a(1) --->HVH21     <----------DOF2   --------->ARR11(3) <---------TOE2(3)                               - ------>At4g35610  <---------At4g35610  --------->AHL20(1)      <---------YAB1                      < -------At4g35610  --------->At4g35610  <---------AHL20(1)      <---------AHL20(2)               <---   agctaataaaaatggaactttagctggattcggaagatttattttattgaaaataaggattctgttttaattatagctctaatacagttgaattggtttt  26807500  Previous    Next  AGI:  At5g67120.1    Description:  zinc finger (C3HC4-type RING finger) family protein. similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT1G45180.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61373.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 26805056    to: 26806963    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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