Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                   --------->ARR14(2)                                 <---------ARR14(2)                                 --------->ARR11(3)                                <---------CCA1(2)                         --------->ANAC46                                                   ---------     <---------ICU4    <---------ALFIN1                                       <---------ARR14(2)    --------->ICU4    --------->MYB46(3)                               <---------ANAC58     <--------    <---------YAB1   ------>MYB83<---------ARR11(3)                    <---------ANAC58     --------- <---------YAB1    --------->AtMYB61              <---------TOE2(3)   <---------ZAT2        <-------- ----------GT1    --------->MYB46(3)        --------->AHL20(2)        --------->ZAT2       <---------CCA1(2) -YAB1 <---------YAB1------>MYB46(1) --------->At4g35610    <-----------GT1   --------->ARR14(2)    <   gttaccattattctcgttccaccatccactcgatatatctgctacataatataagattagatttacaatccaagcttgcatatatgtgtgtgtatatcta  26762200                                                                                    --------->LBD16                                                                                   --------->ANAC58                                                                                   --------->RAP2.3(2)                                                                                   --------->RRTF1(2)                                                                                   --------->ANAC58                                                                                   --------->RAP2.6(2)                                                                                  --------->RAP2.3(1)                                                                    <---------ARR14(2)  <---------TOE2(3)         --------->AHL20(2)                                         --------->ARR14(2)---------->DOF2      <---------TOE2(3)                                       --------->ANAC58   --------->At4g35610 >ARR11(3)                    ---------->DOF2                 --------->ANAC58   <---------At4g35610 -ARR14(2)     --------->AHL20(2)                        <---------ANAC55(2)--------->YAB1 >ARR14(2)    <---------AHL20(1)                     <---------ARR11(3)    <---------YAB1         --- -ARR11(3)    --------->AHL20(1)                     --------->ARR11(3) --------->TOE1(2)        ---- -------TEIL --------->AHL20(2)         <---------ZAT6<------ZmHOX2a(2) --------->TOE2(2)        <---   catacatttatgtaaatatatatacctagagagaaagtactagagatagcttcaagatcaagtgaagccagaaacgtatgatcagccgcaaaggtagtag  26762300                                                                --------->WOX13(1)                                                               <---------WRKY12                                                               <---------WRKY38(1)                                                              --------->WRKY18(1)                                                             <-----------HVH21                     --                                                        ---------->DOF2                       <------                                                     ------>ZmHOX2a(1)                        -------                                                     <---------------AGL15                    -------                                                    --------->TOE2(3)                        --------        <---------TOE2(3)                           --------->TOE1(3)                        --------       <-----------GT1                           --------->GLK1(2)<---------ATHB12     --------->ANAC58     <---------WOX13(1)        <-----------------AGL2================================================  <---------YAB1              >>>>>>>>>MYB2      --------->ARR11(3)        ----------->GT1   -------- ------>CCA1(2)   <---------ANAC58               <---------ARR14(2)      --------->At4g35610--------- ----->ARR11(3)   <---------ANAC46               <---------ARR11(3)      <---------At4g35610--------- ------ARR11(3)   <---------ANAC58               --------->ARR14(2) ---------->DOF2    --------->ANAC58   atatatgattaacaatgctgtcttggagagaaaaccaattttgggtttgaaaatccttaaaagggtcaatgaaagagctgcaaaaactcaagacaaccaa  26762400 -------->DOF2 ---------AGL15             <---------ICU4                                                     <----- -------->AGL15            --------->ICU4        ----------->GT1                        ---------->DOF2 >GAMYB                    <---------ATHB12   ------>MYB83                      --------->ARR14(2) ->MYB46(3)              --------->GLK1(1)    --------->MYB52(1)                <---------ARR14(2) --------->AGL2      --------->ANAC58         ------>MYB46(1)                  ====================== =========MADS_MADS  --------->ANAC58    <-----------GT1                       <------ZmHOX2a(1) --------->AGL3   ------->GAMYB <---------AHL20(2)       --------->YAB1 --------->TOE2(2)    -------- >ANAC58         --------->ANAC46        <---------WRKY18(1)            --------->TOE1(2)--------->DAG2 >ANAC58     <-------TEIL<---------GLK1(1)  <---------MYB59      <---------ANAC46 ------>ZmHOX2a(2) -   aaaaagcatttgagattcaacgcagggaaatcatttttttgtttgaccaaacagtagaaacatagtgacttatacctgtgaggatcgacgaaaagtgatt  26762500            --------->ARR14(2)            <---------ARR14(2)     --------->CCA1(2) <---------HSFB2a(2)                --------->YAB1                      <----------DOF2 --------->HSFB2a(2)               <-------TEIL                      --------->ARR11(3)             - ----WOX13(1)                   --------->ATHB12          --------->bZIP60(2)                -------- ======HOX2a_HOX2a    <---------HSFB2a(2) <---------MYB46(3)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)   < ->ATHB12   --------->GLK1(2)  --------->ICU4         -------->P     <---------ARR11(3)  <----------- ----->ZmHOX2a(2)     --------->HSFB2a(2) <-----------RAV1(1)  <---------YAB1          <---------YAB1   gatcgagaaacgagaatatgtcttcttgaaggaatgattcatagttgttggcctctaaccaggtcattagaggtctttgatcagccatttcgattgaaag  26762600                                                                     <-----------GT1                                                               <---------AHL20(2)                                                               --------->AHL20(2)                       <---------MYB52(1)                      <-----------TBP                      <-------GAMYB                          <-----------TBP                     <---------MYB46(3)                      <---------AHL20(2)                 <---------ANAC58                            --------->AHL20(2)                 <---------HSFB2a(1)                       <---------AHL20(2)                 <---------ANAC58                  <---------ANAC46  --------->ANAC46 <-------TEIL --------->CCA1(2)   --------->MYB52(2)          <---------ANAC58  <---------AHL20(2)--------->AtLEC2 -------->ARR14(2)  <-------TEIL                 <---------ANAC58----------->TBP  <-------TEIL -->DOF2       <-----------GT1       --------->ANAC58      <-----------TBP        ------->TEIL     <- ---------ARR14(2) <---------MYB52(1)--------->ANAC58    <-----------TBP      --------------->AtSPL3 -CBF     <------------CBF <---------ZAT6      ------->TEIL--------->AHL20(2)--------->MYB52(1)   ---   tggatatagatagattgtaacgttcgttagtcttaaaacaaggaaaatgaatcgtgtgtatatatatatataaacaacttaacgtacatgcatagataga  26762700                                                             --------->AHL20(2)                                                            <---------YAB1                                                          <---------ICU4                                                   <------NtERF2                                                  <---------RAP2.6(3)                                                 >>>>>>>>>AtERF-3                                                 --------->RAP2.3(2)                                                 >>>>>>>>>AtERF-4                                                 ----------->GT1                                                 --------->RAP2.6(2)                                                 --------->RAP2.3(3)                                                 --------->DEAR3(1)                                               --------->At4g35610               <---------ANAC55(2)         <---------YAB1                  --------->ICU4   --------->YAB1--------->HSFB2a(2)   <-------TEIL       <------MYB83   --------->HSFB2a(2) <---------ATHB12      --------->CCA1(2) --------------AtSPL8 <------MYB46(1)<---------HSFB2a(2) --------->ICU4 <---------HSFB2a(2)---------- ------->DOF2       --------->ALFIN1 --------->LBD16    <---------ARR11(3)<---------MYB52(1)   gaaagtacatgataagtgggaagtgggtatttagttctccgagatgatgagccgtcaaaatcattatatgttttctgtaagttacgagagagatagtaag  26762800                    <---------YAB1                 --------->ICU4                 <---------YAB1              <---------ZAT6          <---------YAB1        <---------ICU4        -------->HAHB4        --------->ATHB12                                                   -------->HAHB4        --------->YAB1                                                     --------->YAB1       --------->ICU4                                            <---------ARR11(3)       <---------YAB1               ----------->GT1        ----------->GT1<---------YAB1       <---------ATHB12       >>>>>>>>>GT-1          ---------->DOF2    --------->YAB1    <---------AHL20(2)     ----------->GT1          <---------AHL20(2) --------------->AGL15    --------->AHL20(2)    <---------TOE2(3)       <---------YAB1 --------->ARR11(3)                <- ->GT1<---------TOE2(3)<---------YAB1         <---------MYB52(1) --------->ARR14(2)           <------   tagaaattaatgattagtgttgattattttggttaatagggataattcgtttattaaaagctagtaatatcttctaataataggccctaagtttgtaaac  26762900                            <-----------HVH21                      <---------ALFIN1                                                <----------DOF2                  <---------ATERF1(1)                                         <---------ARR14(3)                  <------NtERF2                                               --------->GLK1(2)                  ------>NtERF2                                               --------->ARR14(2)                 --------->ANAC58 --------->ANAC58                            <-----------ARR10                 --------->ANAC46 --------->ANAC58         <---------ANAC58   --------->ARR14(3)                 <---------ALFIN1<-------MYC3              <---------ANAC46   <---------ARR11(3) ------TEIL      <---------ATERF1(1)                    <---------MYB52(1)--------->YAB1           -- ---DOF5.7(2)    --------->ANAC58------->MYC3 <-------TEIL <---------ANAC58   --------->ARR11(3)-----   gttcaaaaatttcataggcccgccccatcccatcacatgctatgcgcgttcatatatcgttgcttgttgtcatctttcaaaatcttctcttttttcaaaa  26763000                                       <---------ANAC55(1)                                       <---------ANAC46                                       <---------ANAC58                         <---------TOE2(3)         --------->GLK1(2)             --------->ANAC55(2)         --------->ARR11(3)     ------->TEIL         <---------ARR11(3)  <---------ANAC46    <---------YAB1   <----------DOF2   <---------ANAC58  <---------ICU4   <---------------AGL15  --------->YAB1   --------------->AGL15 --------->ICU4   <-----------------AGL1                        --------->AHL20(2) ------->YAB1 <----------DOF2----------->GT1             ----------->HVH21                     ------ ---->YAB1--------->RVE1(1)<------ZmHOX2a(1)          ------->TEIL                  --------->TOE2(3)   ataatcatgaaaatctcttttctctttaaggacgtatatttgcgtgagtatatatgtatttgacgaataaatattgacttatatttccataaacaaaaat  26763100  Previous    Next  AGI:  At5g66990.1    Description:  RWP-RK domain-containing protein. similar to RWP-RK domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G18790.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64546.1); contains InterPro domain Plant regulator RWP-RK (InterPro:IPR003035) Range:  from: 26761483    to: 26762588    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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