Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                   <---                                                                                              <------               <---------HSFB2a(2)                                                            -------      --------->TOE2(3)                                                    <---------AHL20(2) -------      --------->TOE1(3)                                                    --------->AHL20(2) -------     --------->ZAT6                      --------->TOE2(3)       --------->ANAC58             -------   <-----------GT1             <---------HSFB2a(2)               --------->ANAC58             ------- ------>AHL20(2)       <---------WRKY18(1)                    <---------ZAT18               --------- --->YAB1      --------->HSFB2a(2) <---------REM1(1) <-----------HVH21  --------->YAB1   ---------->DOF2   taaattaaccctaacttctaaaacttgacctctctagatgtagccttatatgtagggtcactcgggcacataattcataaattgcacatataaaagacgg  26498200     <---------AHL20(2)     --------->AHL20(2)     --------->AHL20(1)     <---------AHL20(1)    --------->YAB1    --------->AHL20(2)   <---------ATHB12 --------->WOX13(1) ------ARR14(2) ---ANAC55(2)                                                                                     --- -->ANAC46                                            --------->CCA1(2)                     <-------- -->ANAC55(2)                                        --------->ARR11(3)                <---------AHL20(2) -->ANAC55(1)              <---------ANAC55(2) <---------HSFB2a(2)                    --------->AHL20(2) -->ANAC58          <---------WOX13(1)         --------->HSFB2a(2)                 --------->CCA1(2) -->ANAC58        --------->ATHB12        <XXXXXXXXXXXXXXXXXXXXMIR863-5P          --------->ARR11(3) >MYB52(1)<---------AHL20(2)         --------->ATHB12<---------ARR11(3)           <---------ARR11(3)   aaccaattatattatatgaacgattgatcacatgaataaacattggtatcgagaagatataagagagacagatagagagagatagatatataatatacct  26498300                                                                  <------NtERF2                                                                <---------DEAR3(1)    ------>ZmHOX2a(2)                                       <---------HSFB2a(2)                   ---   <------ZmHOX2a(2)       <------ZmHOX2a(2)               <---------LBD16                        <--  <---------ARR11(3)      <---------ARR11(3)              ------>ZmHOX2a(1)                <---------ETT(1)  --------->ARR11(3)      --------->ARR11(3)       <------ZmHOX2a(2)                       ----------  --------->ARR14(2)    --------->ICU4             ==============HOX2a_HOX2a               --------->ANAC46  <---------ARR14(2)  ---------->DOF2             <---------ARR11(3)                    --------->ARR14(2) ------>REM1(2)  ------>ZmHOX2a(2)       <---------DOF5.7(2)--------->HSFB2a(2)         <---------ARR14(2) ---GT1        --------->ARR11(3)     --------->YAB1 --------->WOX13(1) <-----------GT1--------->RVE1(1)   tgtagatcccatggttcgatcttgtaaagatcaatttctctgataacgtcgagatcaatcctctgggaggcgattttcttcttgagataatatccgacaa  26498400                                                 --------->GLK1(2)                    --------->TOE1(3)            --------->ARR11(3)            <-------GAMYB                       --------->YAB1            --------->At4g35610                --------->KAN4(1)          --------->ETT(1)                   --------->YAB1          <---------ANAC46                 --------->ANAC58  --------->TOE1(3)       ================================RAV --------->ANAC46  --------->TOE2(3)                     <-       <-----------RAV1(1)                 --------->ANAC58------->TEIL                            --     <---------At4g35610           --------->ZAT14 <---------ICU4        --------->YAB1      <-------     --------->At4g35610         <------NtERF2 <---------KAN4(1)--------->REM1(1)        <------ZmHOX2a(1) ------>ARR11(3)    --------->TOE2(3) --------->ANAC46     -------->P   <---------YAB1   ============ -------ARR11(3)    <---------MYB59<---------ZAT14 --------->YAB1  --------->YAB1     --------->HSFB2a(2) ->HVH21<-----------HVH21  <-----------RAV1(2)<---------KAN4(2) --------->YAB1        <---------HSFB2a(2)   gttcttcatctgtcggatgaaacctaaatccaggcggtatactacacgaataatcttgatcaaccttcatcatattgatagttattttctaggatttatt  26498500                                 --------->YAB1                                <------ZmHOX2a(2)                            <------ZmHOX2a(2)           ------>MYB46(1)                           <---------ARR11(3)           ------>MYB83      <---------ARR14(2)   --------->ARR11(3)         ------->GAMYB   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)              --------->DEAR3(1)  ------>NtERF2 <---------ARR11(3)                   --------->DEAR3(2) --------At4g35610     ---------->DOF2               --------->MYB46(3)                            -- ------->At4g35610------>ZmHOX2a(2)               --------->MYB46(3)                               <- --AHL20(2)     --------->ARR11(3)               <------ZmHOX2a(2)       ------------>CBF   <-------- ========================HOX2a_HOX2a      <---------GLK1(1) *TSS   ----------->GT1        <---------YAB1   tcgctgcggtttcttcttgatcttagaaagatcgatcatagaagaaacccgatcaaccgactctatcaagggaaaaacaatagaacgagagtcttattga  26498600         <---------ANAC46         <------MYB46(1)         <------MYB83         <---------ANAC55(2)        --------->MYB46(2)        --------->MYB52(2)        --------->MYB111(1)           <---------ALFIN1      <---------MYB52(1)        ------->TEIL     <-------GAMYB         --------->CCA1(2)    <------MYB46(1)       --------->ARR11(3)    --------->MYB55(2)    --------->ARR14(2)    <------MYB83<------ZmHOX2a(1)    <---------ZAT18    <---------MYB46(3)    <---------ARR14(2)                                                 <------- ------->ARR11(3)         <---------ARR11(3)           <-------MYC3                    <-------TEIL --------ARR11(3) ---------->DOF2--------->DEAR3(2)    ------->MYC3             --------->YAB1    <-- ----CBF--------->MYB59   --------->ARR11(1)     ----------->HVH21  <---------ZAT14<---------TOE1(2)<   agatgttggttaggtataggaaaagagagatatggaccgtccacttgaacgatgacatgtgtgtttagacttcagagtgtaatcatatgttcatttcgcg  26498700                                                                                           <---------AHL20(2)                                                        --------->ANAC46                   --------->AHL20(2)                                                     <-------TEIL                         --------->AHL20(2)                                                    --------->CCA1(2)       --------->CCA1(2)       -        <-----------GT1                            --------->ARR14(2)      <---------ARR11(3)       < <---------ANAC58                        <---------AHL20(2)                <---------ARR14(2)     --- <---------ANAC58             <---------ARR14(2)   <---------ARR11(3)      --------->ARR11(3)     <-- <---------ANAC46     --------------->AtSPL8 <-----------GT1  --------->AHL20(2) ------->TEIL   ----- --ANAC46  --------->AtMYB61  --------->ARR14(2)   <---------ARR14(2)      --------->ARR11(1)  ------ -------DEAR3(1)   <----------DOF2       --------->AHL20(2) --------->AHL20(2)<---------YAB1--------- ------NtERF2    <---------DAG2     ------->TEIL --------->ANAC46          --------->ARR14(2)  <-----   ttggcgtaattcaccatcactctttctgtacatatatgcacatttatatacaagatacacaaaaatatatgttagaagatatgaatctacaaattaatat  26498800                                                                                       <------NtERF2                                                                                    <------NtERF2                                                                                   <---------MYB46(3)                                                                                   <---------ATERF1(1)                                                                                  <---------DEAR3(1)                                                                                  --------->ALFIN1                                                                                <------MYB83                                                                                <---------ANAC58      <---------AHL20(2)                                                        <------MYB46(1)    <---------AHL20(2)                                                          <---------ANAC58    --------->AHL20(2)                                                          --------->ALFIN1  <---------AHL20(2)              --------->REM1(1)                            <---------DEAR3(1)  --------->AHL20(2)            <-----------GT1                                --------->MYB111(1) -------->AHL20(2)           <---------YAB1                                    <---------MYB46(3) ---------AHL20(2)      --------->ATHB12                                       --------->MYB111(2) ------>AHL20(2)        --------->YAB1                                         --------->MYB55(2) -------AHL20(2)        -------->HAHB4                                     --------->DAG2 ---->AHL20(2)          <---------ICU4                            --------->AHL20(2)--------->ATERF1(1) --->AHL20(1)          <---------YAB1                           ----------->GT1--------->MYB46(2)   - >AHL20(2)             --------->ICU4                          ----------->GT1--------->ALFIN1      - ----AHL20(1)          <---------ATHB12                  ---------->DOF2 ---------->DOF2  <---------MYB52(1)   atatatatatatatgaaacgaagtaatgattatgttacaacttagaatggagacatatgaaaaggagattaaaaaaaaaggtgggtggctccgttttgag  26498900                           <---------YAB1                         --------->YAB1                        <---------YAB1                      --------->YAB1                     <---------YAB1                ----------->GT1              --------->At4g35610              --------->ZAT2<---------ICU4             --------->GLK1(2)                                                   ------>ZmHOX2a(1) -------->CCA1(2)    --------->ICU4         <-----------GT1                --------->MYB46(3) <------ -------->MYB52(1)<---------YAB1         <---------ZAT6               ------>ZmHOX2a(1) <----------DOF2   agaaacgggagagagaagctgtgattatcatcattttgtttttgtgttacttcatgctcaaaatgatgtctccttcaacaatcctgtattctttatttta  26499000                                                                                                <----                                                                                              <------                                                <---------YAB1                               <-------                            ------->TEIL     --------->ICU4                                 <--------                   --------->AHL20(2)        <---------ATHB51                              --------->LBD16                 <----------DOF2      --------->ANAC46                                    --------->ANAC46           --------->ARR14(2)         --------->ANAC58                                   <---------LBD16           <---------ARR14(2)  <---------AHL20(2)  ---------->DOF2                     --------->SPL7 ---AHL20(2)   ------>ZmHOX2a(1)      --------->ANAC58      <---------YAB1           <---------SPL7   tatcatatattcgtttcctctttatatatgtatttaaaacactccaaattatgaaaagaatgactattggaaatactgaagctcgatggtacgcgcggtt  26499100  Previous    Next  AGI:  At5g66300.1    Description:  ANAC105/VND3 (VASCULAR-RELATED NAC-DOMAIN 3); transcription factor. similar to ANAC076/VND2 (VASCULAR-RELATED NAC-DOMAIN 2), transcription factor [Arabidopsis thaliana] (TAIR:AT4G36160.1); similar to hypothetical protein [Thellungiella halophila] (GB:ABB45858.1); contains InterPro domain No apical meristem (NAM) protein; (InterPro:IPR003441) Range:  from: 26497019    to: 26498560    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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