Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                  <---------At4g35610                                --------->At4g35610      --------->AtLEC2          <---------ZAT2                        <----------DOF2 ------->GAMYB             <---------MYB46(3)                   <---------ANAC58 -------->MYB46(3)        --------->ALFIN1                      <XXXXXXXXXXXXXXXXXXXXMIR832-3P  <---- ------>MYB52(1)       --------->DAG2                           <---------ANAC58         --------->ALFIN1 ------WRKY12         --------->DAG2                      <---------RAP2.6(3)          --------->ALFIN1 ------WRKY38(1)     ---------->DOF2                     --------->RAP2.6(2)  --------->YAB1    -----   caacggccatggagaaatcaccaaaaaggtggtgagcagagtctttgtaccagagaaggccgtcttgtttgcctttggaatcagaataagtgtgggaagt  26442200                                                                                        <---------MYB46(3)                                                                                 --------->AtMYB61                                                                                 ------->GAMYB                                                                                 <---------ALFIN1                                                                                <---------MYB55(2)                                                                                <---------MYB111(2)                                                                                <---------MYB52(2)                                                                                --------->MYB46(3)                                                                               -------->P                                                                               ------>MYB83                               --------->DAG2                                  ------>MYB46(1)                              ---------->DOF2                       <---------CCA1(2) <---------MYB52(1) -----AtMYB61           <----------ID1    --------->DAG2       <---------At4g35610--------->MYB52(1) ---->ALFIN1            ----------->GT1  ---------->DOF2    <------NtERF2  --------->ANAC46  <-------   ggtggaagaagagggccagagacaagaggtcaaaaagttgaagaaaagggataacatcgggcctcatctcatatcatccccaaccaccgattgttatgct  26442300                                                                                                   --                                                                                                   --                                                                                                -----                                                        <---------ATHB12    <------ZmHOX2a(1)   -----                                                --------->HSFB2a(1)   ---------->DOF2           -----                                                <---------HSFB2a(1)--------->ANAC58            ------                             ---------->DOF2    <---------HSFC1(2) --------->ANAC58           ------- --YAB1            ----------->GT1              --------->HSFC1(2) --------->ANAC46    ----------->GT1   aaaatgaatgaatgaagtatgttgaaaaaacaaaagaagagagagtcggaaacttccattcattcactcacacaaagaggagttttgtttagtaaaaaaa  26442400                ------>ZmHOX2a(2)               <------ZmHOX2a(2)              <---------ARR11(3)              --------->ARR14(2)              <---------ARR14(3)   <---------At4g35610   --------->At4g35610   --------->ZAT2   <---------ZAT2 --------->MYB46(3) <-----------RAV1(2)      --------->CCA1(2) ------->MYB52(1)        <---------ARR11(3)                  --------->REM1(2) --------->RAV1(1)       --------->ARR11(3)                 --------->ALFIN1 ---->ANAC46  --------->ARR14(3)                          --------->ALFIN1 ---->ANAC58  --------->ARR11(3)                         ------->MYC3 ---->ANAC58  <---------ARR14(2)                         <-------MYC3                     ---------->DOF2 --->DAG2    --------->GLK1(1)                   --------->ANAC58                    ---------->DOF2 --->DOF2    <---------GLK1(1)                   --------->ANAC58            ---------->DOF2   gcaacagctggatggagatctcaaggagatatagagaaactattaagttgtaagtaacatgtgtggagagagatagagtgaaagaaaaaaagaaaagact  26442500                          --------->MYB59                      --------->ATHB12                      <---------AHL20(2)                     --------->ICU4                     --------->AHL20(2)              <---------ANAC58                  <---------RVE1(1)             <----------DOF2                  <---------CCA1(1)      <------ZmHOX2a(1)                ---------->DOF2                 --------->ARR11(3)--------->ZAT14   <---------ANAC58   =============================                 <---------ARR11(3)<---------ZAT14   <---------ANAC46   <------ZmHOX2a(1)        <---           <---------GLK1(1)<------ZmHOX2a(1)   <---------DAG2    <---------ZAT14         <---------AHL20(2)   ctctctgtttttgatttcagatatttattaggaacagaacagaggaagcccttttccttgtatatgagaacagaggaaaagaagagagacaatttatgga  26442600                                                                                                  <--                                                                                                  ---                                                                                                  <--                                                                                                  ---                                                                                                <----                                                                                                -----                                                                                                -----                                                                                                -----                                                                                                <----                                                                                                -----                                                                                                <----                                                                                                -----                                                                                                <----                                                                                                <----                                                                                              -------                                                                                              -------                                                                                             <-------                                                                                            ---------                                                                                            <--------                                                                                            <--------                                                                                           <---------            <---------ARR14(2)                                                         <---------ANAC58            --------->ARR14(2)                                                         <---------ANAC55(2)          --------->LBD16                                                              --------->TGA1a         --------->HSFB2a(2)                                                           <---------ANAC58         <---------HSFB2a(2)                                                           <---------ANAC55(1)     --------->GLK1(1)                                              <----------ID1     --------->ANAC55(2)     <---------GLK1(1)                                           ---------->DOF2       <---------TGA1a    --------->ARR11(3)                                           ================================bZIP_DOF    <---------ARR11(3)                                       ====================================bZIP_DOF ===HOX2a_HOX2a                                              ---------->DOF2           <---------ANAC46 ---ZmHOX2a(2)                  *TSS<-----------GT1   <-----------GT1<------ZmHOX2a(1)<-------TEIL<--   tcacaagatttccagagcctctctctctctctctcaaataactcttcttctatatttgaccatcaaagaaaggacaagaagacacacatacgtgtgcacg  26442700     ------>ZmHOX2a(1)    --------->TOE2(3)    --------->TOE1(3) -------ZAT14 ------>ZAT14 -----TEIL ------>ZAT18 ---MYC4 -->MYC2 -->PIF5 -->PIF4 ---PIF4 -->MYC4 ---PIF5 -->MYC3                                                      <-----------GT1 ---MYC2                                                  <---------YAB1 ---MYC3                                                <---------ICU4 >TEIL                   --------->GLK1(1)              --------->YAB1 ----->OsbHLH66    <-------MYC3                        <---------YAB1           --------->DEAR3(1) -----OsbHLH66     ------->MYC3                        --------->ICU4           --------->AtMYB61 >ZAT18           --------->TGA1a                    <--------HAHB4             <---------ALFIN1 -ZAT18           --------->O2                       <---------ICU4            --------->MYB46(3) -ZAT14           <---------O2                      <---------YAB1         --------->AtLEC2 --------PIF3(1)  <---------TGA1a                   --------->ICU4       <---------ANAC58   --------- -------ZAT18------>ZmHOX2a(1)                   <---------YAB1          <---------ANAC58 <----------   tgcactccttaactcctcccatgtgggatttacaaacatacaatagctgttctcattattattatttccttcttgccttgcaccaccattgttaactcta  26442800                                    <---------DAG2                                                  <                               ------->TEIL                                                         <                      >>>>>>>>>>WRKY18                                                              -                      >>>>>>>>>>WRKY40                                                              -                      >>>>>>>>>>WRKY62                                                         <-----                      <---------WRKY18(1)                                                    --------                     --------->WRKY12               --------->AHL20(2)               <---------ARR11(3)                     ----------->HVH21          <---------YAB1                       --------->ARR11(3)                     --------->WRKY38(1)      <----------DOF2                    <-----------------AGL3 >ZAT6               --------->WRKY45 --------->ATHB12         <----------DOF2   ==================== -GT1              <----------DOF2<-----------------AGL1   <---------PCF2      <-----------GT1<------   ttcaattcaaagtttcaaaccctttgaccaatgcatccccttattgggctttgattatatgggccctttctatttgatatttttcaatatatggcccgtt  26442900         <---------AHL20(2)         --------->ARR11(3)         --------->AHL20(1)     <---------AHL20(2)    --------->AHL20(2)                             <---------ARR14(2)         ----------------->AGL3    --------->AHL20(1)                             <---------GLK1(2)        --------->ARR14(2)    <---------AHL20(2)                             --------->ARR14(2)       <---------ARR14(2) ---------AHL20(2)                            <---------ALFIN1       --------->ALFIN1 ---------AHL20(1)                           ----------->HVH21     <---------ANAC46 -------->AHL20(1)                     --------->ANAC46            <---------ANAC58 -------->AHL20(2)  ------>NtERF2      --------->ANAC58         --------->ANAC58 ----MYB52(1)       ---------->ID1     --------->ANAC58         --------->ANAC58                    - --->GT1 <---------AHL20(1)          ---------->DOF2            --------->ANAC46                   -- ===============================================================================================MADS_MADS -GAMYB <-----------TBP    --------->YAB1   <---------ALFIN1  *TSS <---------ANAC58      <----------ID1   aataaatttaatatatagcttcggccttataagaagaattcaagcccctcaccgatactctagtccaagccgtgggcagaaccaaaataagagaacaaaa  26443000                                                                             ------>NtERF2                                                                            --------->RAP2.6(2)                                                                            --------->DEAR3(1)                                                                            --------->ANAC46                                                                            --------->RAP2.3(2)                                                                           --------->MYB46(3)                                                                           --------->ERF1                                                                           --------->RAP2.3(1)                                                                         --------->ARR14(2)                                                                   --------->ANAC58               ---                                                                   --------->ANAC46               <--            --------->HSFB2a(2)          <-----------HVH21      <---------ZAT18           <---------HSFB2a(2)            --------->HSFC1(1)      <---------GLK1(1)         --------->At4g35610 --------->ARR14(2)            <---------HSFB2a(2)--------->At4g35610            <---------At4g35610 <---------ARR14(2)           <---------LBD16 <---------MYB46(3)              <---------At4g35610   <---------MYB52(1)-- -------->DAG2             --------->MYB52(2)    --------->TOE2(3) --------->ANAC58       --------->HSFB2a(2) -------->DOF2   <---------HSFB2a(1)--------->GLK1(1)      --------->At4g35610<------NtERF2     <----   aaaaagtttgttttctggaatcgtcgcgatagttgctgaactccgtcgcaacttcaatggcatctgctcactccatagccgccgtttctgttctcgatgc  26443100  Previous    Next  AGI:  At5g66080.1    Description:  protein phosphatase 2C family protein / PP2C family protein. similar to protein phosphatase 2C, putative / PP2C, putative [Arabidopsis thaliana] (TAIR:AT3G51370.1); similar to protein phosphatase 2c-like protein [Thellungiella halophila] (GB:AAM19705.1); contains InterPro domain Protein phosphatase 2C-related; (InterPro:IPR001932); contains InterPro domain Protein phosphatase 2C; (InterPro:IPR015655); contains InterPro domain Protein phosphatase 2C, N-terminal (InterPro:IPR014045) Range:  from: 26440645    to: 26442632    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g66090.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO23263.1); contains domain Adenine nucleotide alpha hydrolases-like (SSF52402) Range:  from: 26442962    to: 26444398    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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