Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                ------->GAMYB       --------->YAB1      <---------YAB1     <---------ARR11(3)     --------->ARR11(3)    --------->YAB1  --------->ATHB51    -------->HAHB4  <---------ICU4                                           <---------REM1(1)    <---------ICU4  --------->ATHB12                                      <-----------RAV1(1)--------   <---------ATHB12<---------YAB1                                        <---------------AGL15   --------->ICU4--------->YAB1                                          --------------->AGL15   ---- ->ARR11(3)  --------->MYB46(3)                                         ----------------->AGL1   ---- --ARR11(3)  <---------MYB52(2)                                       <-----------GT1  <---------ANAC46   ttctaatgatcatcaacaaacataattgcagtttcagaattgtataagagtttatattacaagagtcttattttacctgttgtagaatggcgaattggta  26121400                                ------>ZmHOX2a(2)                           ------->PIF5                           <-------MYC2                           <-------MYC3                           ------->MYC2                           <-------PIF5                           ------->MYC3                          <---------TGA1a                          --------->TGA1a                          --------->bZIP60(2)                          --------->ANAC46                          --------->O2                          --------->ANAC55(2)                          <---------O2                        <------------OsbHLH66                   --------->HSFB2a(1)                   <---------At4g35610                   --------->At4g35610                   <---------HSFC1(2)            <---------GLK1(2) --------->ARR11(3)        ============================bZIP_DOF    --------->LBD16--------->ZAT2              <------MYB46(1)  <---------LBD16  <---------ZAT2              <------MYB83 --------->MYB52(1)--------->HSFC1(2)         <---------MYB46(3)             ----------->GT1       <- --->GT1---------->DOF2 <---------ALFIN1      --------->MYB59   <---------------------WRI1     ------ ----->ANAC58      <---------HSFB2a(1)        <---------AtMYB61 <------ZmHOX2a(2)    ----------->GT1 ----->ANAC58--------->GLK1(2)<---------ARR11(3)  --------->ETT(1)  ---------->DOF2---------->DOF2 --   agaaaccggataaagaatcggagcttccacgtgatctcttcatcttgtttggtcggaacaattgagatcgaaaagaagaaggaaataaagtttatattga  26121500                                                                <------ZmHOX2a(2)                                                               --------->ARR14(2)                                                               <---------ARR14(2)                                                   <---------ANAC58       <---------CCA1(2)                                   ------>ZmHOX2a(2)           <---------ARR11(3)                                  <------ZmHOX2a(2)<---------ANAC55(2)  =========================bZIP_DOF      <------ZmHOX2a(2)          --------->AGP1    <---------ANAC55(1)  --------->TGA1a     --------->ARR11(3)          <---------AGP1    <---------ANAC46     --------->O2 --------MYB46(3)                --------->ARR11(3)--------->ANAC55(2)  ============================= --->ATHB12         <-------GAMYB<---------ARR11(3)<---------ANAC58------>ZmHOX2a(1)           ------ --------->GT1     <---------MYB46(3)         --------->AtMYB61--------->ARR11(3)     <----------DOF2   atggttagatcaaggcctagatggttatcgattaagatctatctacgaccaatacgtgaagaaacgatcctctctcgtctctcatcttctttttctccaa  26121600      <----------DOF2     ------>ZmHOX2a(2)    <------ZmHOX2a(2)   <-----------ARR10   --------->GLK1(2)   --------->ARR11(3)   <---------ARR14(2)                                                                         -------   --------->ARR14(2)                                                                 --------->YAB1   <---------ARR11(3)                                                                <---------ATHB12  <------ZmHOX2a(1)                                                                  --------->MYB46(3) --------->HSFC1(2)                                                                 ------>MYB83----- <---------HSFC1(2)                                                                 ------>MYB46(1) ================bZIP_DOF                                                          --------->WOX13(1) ---->DOF2                                                --------->ZAT6  <---------At4g35610 -------   agaaggatctttgctctgtgtctagactatccatataagatggaaacagagaattgactaatactaagaaatagtcatctaataccaatcaacaccaaga  26121700                                                                           --------->LBD16                                                                          <---------LBD16                                                                   <---------AHL20(2)       <----------DOF2    <---------ANAC58                     <--------HAHB4     ------->TEIL         <---------ANAC58                     --------->YAB1--------->LBD16 -->ANAC58--------->AHL20(2)             <---------ZAT6       <---------YAB1--------->LBD16 ---->AHL20(2)    <-----------RAV1(2)<---------YAB1  ---------->DOF2  <-----------GT1 -->ANAC58<---------AHL20(2)      --------->ICU4--------->GLK1(1)<---------YAB1   aaatatgaacttttaattcatcaggttttcttgggaaatattagtgagagatttcaaaagtcgtattattattttcccccgagaaatggaaattggtaag  26121800                                                      <---------LBD16                                                   --------->ZAT2                                                  <---------ALFIN1                                                 <---------ALFIN1                                              --------->ANAC58                                              --------->ANAC58                                         --------->At4g35610                                  <------                                         <---------At4g35610                         <---------STY1(1)                                        *TSS  --------->ANAC46--------->AHL20(2)   --------->TOE1(3)                                       <---------ANAC58 --------->LBD16           --------->ZAT6                                       <---------ANAC58<---------ANAC46      <------ZmHOX2a(1)-------                                  --------->CCA1(2)<---------ZAT2      --------->ANAC46   <------ZmHOX2a(1)   agagagatagagagggagagagatagagagggagagagatggcttctcaccccaactccgggttttaaataagacgacaggataaccctagaggaagtgt  26121900    --------->ARR11(3)    <---------ARR11(3)   --------->RVE1(1)   --------->GLK1(1)         --------->LBD16   <---------CCA1(1)        <---------LBD16   <---------RVE1(1)       <---------ANAC46   --------->CCA1(1)       <---------LBD16                          <<<<<<<<<<<<<<<<<LFY   <---------GLK1(1)       <---------ANAC58                       <---------ANAC58  --------->ARR11(3)       <---------ANAC58                       <---------ANAC58                 --  <---------ARR11(3)      <---------LBD16            <---------AHL20(2)                 --------->MYB52(1) -----RAV1(1)        <------ZmHOX2a(1)              <---------AHL20(2)          <---------ZAT6     <- -->ALFIN1        <---------LBD16<---------ARR14(2) --------->AHL20(2)    <---------MYB46(3)  -------   tggagatatcttgagttatttcaggaatttcgggggattttttaaactttgtaattaaatgcaaaatagcttacaatggttagagttagacaccggttta  26122000                                                                           <---------ARR11(3)                                                                           --------->ARR11(3)                                                                         ----------->ARR10                                                                     <------NtERF2                                                                    --------->LBD16                                                                   --------->DEAR3(1)                                                                   --------->RAP2.3(2)                                                                   <---------ATERF1(2)                            <---------YAB1                         --------->ATERF1(2)                          <---------ICU4                           --------->RAP2.6(2)                          --------->YAB1                           --------->RAP2.3(3)                         <---------ATHB12                         <------NtERF2                   <---------ANAC46                               --------->RAP2.3(1)                   <---------ANAC58                               --------->ATERF1(1)      <---------AHL20(2)                   <---------ANAC58                               --------->DEAR3(2)       <---------AHL20(1)                   ----------->GT1                               --------->ZAT2            --------->AHL20(2)                 <------ZmHOX2a(1)               <---------ZAT2  <---------ATERF1(1)       --------->AHL20(1) ------->YAB1 <---------HSFB2a(2)                <---------At4g35610<---------RAP2.6(3)   --------->AHL20(2) --------ICU4 <-----------RAV1(2)                --------->At4g35610------>NtERF2       --------->TOE2(3) -->ZAT14     --------->HSFB2a(2)                --------->ZAT2<------ZmHOX2a(1)      <-------TEIL   ctcatgagactttggtccaggacgtgaatcatgacaatgccatgggttttcagctcggctacttaggagccggcatagattttaaagattcattaaatta  26122100                   <---------DAG2                                               <---------AHL20(2)                <-----------GT1                                             --------->AHL20(2)       --------->TOE2(3)                                 --------->ANAC46   <---------AHL20(1)      <---------ICU4                                     --------->ANAC58   <---------AHL20(2)      --------->YAB1                       <---------DAG2--------->ANAC58  <---------AHL20(2)      --------->ATHB12                     <----------DOF2                 --------->AHL20(2)     <---------ATHB12   --------->YAB1    <---------ANAC58       --------->ICU4 --------->AHL20(1)     --------->ICU4<----------DOF2        <---------ANAC58    --------->ICU4--------->AHL20(1)    <---------ARR11(3) <---------YAB1     <---------ANAC46----------->RAV1(1)   --------->AHL20(2)   gttcaaaatcattagtttctactttatcatataaaacactcgttgctttttcatatactacgacataattttgaaaattaaattttttgaaacatatact  26122200                                            --------->YAB1                                            --------->AHL20(2)                          --------->At4g35610       --------->ARR11(3)    -------->HAHB4                      <-----------GT1       <---------AHL20(2)      <---------ANAC58  ---------->DOF2                <---------AHL20(2)       --------->YAB1             <---------ANAC58  <---------DOF5.7(2)               --------->AHL20(2)       <---------AHL20(2) --------->YAB1 --------->YAB1----------->GT1            <----------DOF2         --------->YAB1  <---------ARR11(3)   <---------YAB1<---------TOE2(3)    --------->ICU4  --------->AHL20(2) --------->AHL20(2) <---------YAB1 --------->ICU4<---------TOE1(3)   aacaaaatgatcaacttttaaatttaacagttgaaaaatcatataataatataagatgttctcatagttagcgtaatgatacaatagttaaagttaaaat  26122300  Previous    Next  AGI:  At5g65310.1    Description:  ATHB5 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 5); transcription factor. Identical to Homeobox-leucine zipper protein ATHB-5 (ATHB-5) [Arabidopsis Thaliana] (GB:P46667); similar to ATHB6 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 6), transcription factor [Arabidopsis thaliana] (TAIR:AT2G22430.1); similar to unknown [Populus trichocarpa] (GB:ABK95942.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Helix-turn-helix motif, lambda-like repressor; (InterPro:IPR000047); contains InterPro domain Leucine zipper, homeobox-associated; (InterPro:I Range:  from: 26119186    to: 26121840    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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