Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                             --------->ARR11(3)                                           <---------AGP1                                           <---------ARR14(2)                ------>ZmHOX2a(2)          --------->ARR14(2)               <---------GLK1(1)           <---------ARR11(3)               <------ZmHOX2a(2)          <---------CCA1(2)                <----------DOF2               --------->GLK1(1)        <---------HSFB2a(2)            <---------ARR14(2)              <---------ARR11(3)        --------->HSFB2a(2)        --------->At4g35610              --------->ARR11(3)   <---------MYB46(3)              <---------LBD16          <------NtERF2              ------->TEIL       <---------ANAC58                  <---------At4g35610  --------->ANAC46              <---------ARR14(2) <---------ANAC58                <-----------RAV1(2)    <---------bZIP60(2)              --------->ARR14(2) <-------GAMYB             <---------WOX13(1)           <---------O2              <---------AGP1    <---------MYB46(3)        --------->ARR14(2)            --------->O2           <---------ANAC55(2) <---------TOE2(3)          <---------ARR14(2)       --------->YAB1          <---------LBD16<---------YAB1<---------LBD16<---------LBD16  --------->ARR14(2)<---------LBD16 ---------YAB1<-----------ARR10<---------YAB1------>ZmHOX2a(2)   ---------->CDC5   <---------ICU4<---   ttttgatggaactacggatctctggttgtgattttggttgttctggatcttgttattctggattggctcagcggaaactttctgatcatcacgcggcttc  26050700                                                   --------->At4g35610                                                   ------>NtERF2                                                   <---------At4g35610                                                 --------->ATERF1(1)                                                <---------ATERF1(1)                                                <---------At4g35610                                                --------->At4g35610                            <-----                                             <-----------HVH21                             <--------P                                           <---------ANAC58                                ==========                                           <---------ANAC46                            --------->At4g35610                    ----------->GT1        <---------RAP2.6(2)                         <---------At4g35610                --------->ARR11(3)         <---------ANAC58                       --------->ETT(2)           --------->LBD16            <-----------RAV1(1)                         <---------ETT(2)<--          <---------LBD16             <---------MYB46(3)        <----------DOF2 <---------DOF5.7(2)        ------>NtERF2               <---------ANAC58    ----------->ARR10     <---------MYB52(1)  <--        --------->ABI4(2)           <---------ANAC46  --------->LBD16         --------->DOF5.7(2) <--    <---------DEAR3(1)              <---------ANAC58 <---------ANAC46        <-------GAMYB--------->At5g28300 -------DOF2--------->LBD16    <-----------RAV1(1)--------->DEAR3(1)         ========================   tttaactcggtgcccggagatttagtgaattgaatgttgcttgttgcggtcgcagccgtagatgtgcttttctggctaccgttatcgacagcggtagatt  26050800                                                                          ------>NtERF2                                                                          --------->ABI4(1)                                                                         ------->GAMYB                                                                         <---------ALFIN1                                                                         --------->DREB2C(2)                                                                         --------->DEAR3(1)                                                                        --------->DEAR3(2)                                                                        <------NtERF2                                                                        --------->DEAR4(2)                                                                        --------->ATERF1(1)                                                                        --------->MYB46(3)                                                                       <---------ATERF1(1)                                                                       ------>NtERF2                                                                      --------->DEAR3(1)                                                                     <---------ABI4(2)                                                                    ------>NtERF2                                                                    <---------ATERF1(1)                                                                    <---------At4g35610                                                                   --------->DEAR3(1)                                                                   --------->RAP2.3(3)                                                                  --------->ATERF1(1)                                                                  --------->RAP2.3(1)                                                                  <------NtERF2                                                                 --------->LBD16                                                                 <---------ATERF1(1)                        <---------ATHB12                         ------>NtERF2                       ------>MYB83                              --------->At4g35610                       ------>MYB46(1)                           <------NtERF2                     --------->MYB46(3)                          <---------At4g35610                     <---------MYB46(2)                          --------->ABI4(1)                     <---------MYB111(2)                        --------->RAP2.3(2)                     <---------MYB59                            --------->DEAR3(1)                     <---------MYB111(1)                        --------->RRTF1(2)                    --------->ANAC46                           --------->RAP2.3(1)              --------->ANAC58                                 --------->RRTF1(1)              --------->TGA1a                                 <---------ATERF1(1)              <---------O2                                    --------->LBD16              --------->O2                                    --------->At4g35610         --------->ANAC58             ---------->DOF2         ------>NtERF2 <---------ANAC46         --------->ANAC58--------->YAB1            <-----------ARR10--------->At4g35610         --------->ANAC46<---------ICU4   --------->AtMYB61  --------->DEAR3(1)                     - ----GLK1(1)  --------->ANAC58  --------->ANAC58   --------->ARR14(2)<---------MYB55(2)            -- =======================MYC_MYB --------->ANAC46   --------->ARR11(3)--------->ATERF1(1)          --- -------ANAC58--------->bZIP60(2)    <---------ATHB12------>ZmHOX2a(2)<---------ALFIN1           <--- -------ANAC58===================================bZIP_DOF    --------->ANAC46  --------->ZAT14   ---- -------ANAC46<---------TGA1a--------->ZAT14   ----------->RAV1(2)--------->ERF1      ------>ZmHOX2a(1) =======================MYC_MYB --------->ANAC58   <---------ARR11(3)--------->MYB46(3) <---------ALFIN1   tcttggaccacaagccacgtctaccaaacattacactcaataaaccacaacctgatcttctctccgccgcagccaccgccgtgttctcctccatctcaag  26050900                                --------->LBD16                               --------->LBD16            ----------->GT1   --------->LBD16                                                 ------- -------->DEAR3(1)           <---------LBD16                                                  <------ ------->DEAR3(2)      --------->ARR14(2)                                          --------->YAB1 ------>MYB52(1)       <---------ARR14(2)                                         <---------YAB1    - ------ARR14(2)        <-----------ARR10   --------->YAB1            ---------->DOF2         -------- ----->ARR14(2)       <---------CCA1(2)   <---------ATHB12    --------->YAB1  <---------GLK1(2)<-----   aaccggcctgagaattgtaaaaccctatctcccccgaagaacaaatcaaaattcagagatagaataagaatcaaagaatagattatgaaaaccagagatc  26051000                                                                                                   --                                                                                                   <-                                                                                                   --                                                                                                   <-                                  ---------->DOF2                                                  <-                         <---------TOE1(2)                                           ---------->DOF2-                      ------>ZmHOX2a(2)                                            --------->At5g28300                      =================================HOX2a_HOX2a              --------->SPL7    ---                     <------ZmHOX2a(2)                                        ----------->HVH21   <-- -->ARR11(3)         ==================================HOX2a_HOX2a            <------NtERF2<------ZmHOX2a(1) ---ARR11(3)        --------->ARR11(3)                    <---------YAB1      <---------SPL7      --- -------->YAB1      <---------ARR11(3)                  ----------->GT1    ------>NtERF2 <----------- ->GLK1(1)         --------->GLK1(1)               ---------->DOF2        ------------------>SPL14<-- -ZmHOX2a(2)       <---------GLK1(1)            <------ZmHOX2a(1)  <----------DOF2----------->GT1----   aatggtgatgagaagagagagagatctcatgttttaaaaagaagaatagaggagaaagatgtgattaggcttttctcggccggacggtaaagaggaacga  26051100           <---------ANAC46           <---------ANAC55(2)           <---------ANAC58           --------->ANAC55(2)           <---------ANAC58        <---------MYB52(1)      <---------ANAC58      <---------ANAC58 ------->ARR14(2) --------ARR11(3)                                    --------->YAB1 ------->ARR11(3)                          <------------CBF --------GLK1(2)                         --------->ARR11(3) --------ARR14(2)                        <---------AHL20(1)                     ----------->GT1 -------->GLK1(2)                   --------->AHL20(2)                     --------->LBD16 ------>HSFB2a(1)                   <---------AHL20(2)    <---------YAB1  --------->ANAC46 -------HSFC1(2)                 <---------AHL20(2)  <---------ICU4       --------->ANAC58 ------>HSFC1(2)                <---------AHL20(2)  --------->ICU4        --------->ANAC58 ----AtSPL8<---------ANAC55(1)  --------->AHL20(2)  <---------YAB1        <---------ANAC55(2) -------HSFB2a(1)      <---------AtMYB61 --------->AHL20(1)              <---------LBD16 ------->ARR10 *TSS  <------------CBF<---------AHL20(2)<---------YAB1<-----------GT1       <---------   agattcttccgtttcgtgttttgtattggtgtcattaattttatatattgtgtcattatgatttttggtttttactacggaaatgaaaaataagcgacta  26051200                                                                                            <--------                                                                                         <------MYB83                                                                                         <------MYB46(1)                                                                                        <---------AtMYB61                                                                                        --------->ALFIN1                                                                   <---------YAB1       --------->MYB55(2)                  ---------->DOF2  ----------->GT1   <---------AHL20(2)                 --------->MYB111(1)             ---------->DOF2   --------->ATHB12    --------->ANAC55(2)                  <---------MYB46(3)    <---------TOE2(3)  ----------->GT1   <---------AHL20(2)     <---------YAB1          --------->MYB111(2) -ID1----------->GT1   <----------ID1    --------->AHL20(2)  <---------YAB1     --------->ICU4   atagtttaggtgaaaaaaaggaaagacgaaaaacgattggaaattatatgtttatgtaattttgttattgttattcgatgtcaaaatgagttggtggtga  26051300            <------NtERF2        <------MYB46(1)                                                      <---------ANAC58        <------MYB83             --------->WOX13(1)             <---------ZAT2       --------->MYB111(1)   --------->MYB46(2)                 --------->At4g35610       --------->ALFIN1      --------->MYB52(2)             <-----------HVH21<---------ANAC58      <-       --------->MYB111(2)   ----------->GT1             <----------DOF2<---------DAG2            <--  ---------->DOF2          <---------MYB52(1)      --------->ZAT14      <----------DOF2           --- -MYB46(3) ------>NtERF2   <--------P          <-----------GT1  <---------At4g35610          <-------   gtttgaaagttggtgccaatgcattactggttagttaatcacctctatttctctgttctctttgtcagctcttactttttcttgtttttggttatttgat  26051400                        <---------MYB46(3) <---------ANAC58                        <-----------RAV1(1)<---------ANAC58               -------->ATHB1              <---------ANAC46               <---------ICU4 --------->ZAT18               --------->YAB1--------->ANAC55(2)              --------->ICU4 <---------ANAC55(2)              --------->AHL20(2)         <-----------HVH21              <---------AHL20(2)--------->ZAT2              --------->AHL20(1)<---------ZAT2              <---------YAB1 <---------ANAC58        --------->HSFB2a(2)  <---------ANAC58                                   --------->ZAT18    <-        <---------HSFB2a(2)  <---------ANAC46                                   <---------DEAR3(1)--- --------AHL20(2)   <---------YAB1----------->HVH21                            --------->ALFIN1------ -------AHL20(2)  --------->YAB1<---------At4g35610                         --------->DAG2   ------>ZmHOX2a(1) ------>AHL20(2) <---------YAB1 --------->At4g35610                    ---------->DOF2      --------- --AHL20(2) <---------ICU4   <---------ANAC55(1)               ------->TEIL---------->DOF2---------->ID1   tttaatttttctaaaaattattatagttgttgcgtgctgactcggtcgtgtaagagagaagaatgaatatttagaaagaaagtgggcgatttgtccttaa  26051500     --------->LBD16                                           <---------DAG2    <---------ANAC55(1)                                        <----------DOF2    <---------ANAC58                                          <---------------AGL15    <---------ANAC55(2)                                       --------------->AGL15               ---    --------->ANAC55(2)                                      ----------------->AGL1               <--    <---------ANAC58                                 --------->ANAC46                             ---    <---------ANAC46                                 --------->ANAC58                             <-- --------AHL20(2)                                    --------->ANAC58--------->ANAC55(2)  <---------ARR11(3) ------>AHL20(2)                                     <---------ANAC55(2)        <-------MYC3 <------- --->AHL20(2)                            <---------AHL20(2)<---------ZAT18      ------->MYC3------>ZmHOX2a(2) >TOE2(3)    <-----------GT1      <---------At4g35610--------->ANAC55(2)<-----------GT1   --------->ARR11(3)   attaatccgtgtttttctccaattgactctatatttagatgattttatggagagcacgtagttccctttttatgtaacaaaacgtgtttgatgatctttt  26051600  Previous    Next  AGI:  At5g65160.1    Description:  tetratricopeptide repeat (TPR)-containing protein. similar to tetratricopeptide repeat (TPR)-containing protein [Arabidopsis thaliana] (TAIR:AT5G10090.1); similar to 52O08_23 [Brassica rapa subsp. pekinensis] (GB:AAZ67569.1); similar to 4D11_10 [Brassica rapa subsp. pekinensis] (GB:AAZ67524.1); similar to 80A08_7 [Brassica rapa subsp. pekinensis] (GB:AAZ67592.1); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990); contains InterPro domain Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609); contains InterPro domain Tetratricopeptide TPR-1 (InterPro:IPR001440); contains InterPro domain Tetratric Range:  from: 26048410    to: 26051115    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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