Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                     <---------MYB52(1)                                                                              <-----------HVH21                                                                             --------->TGA1a                                                                             <---------O2                                                                             --------->O2                 --------->ARR11(3)                                        --------->MYB52(1)                 <---------ARR11(3)                                   <-------TEIL<------NtERF2   <---------------AtSPL3                                       <-------TEIL <---------TGA1a   <---------------AtSPL8      <----------DOF2                 --------->CCA1(2) ------>NtERF2   --------------->AtSPL8      <---------DAG2                 <---------ARR14(2) <---------DEAR3(2)   --------------->AtSPL3  <---------ZAT18                    --------->ARR14(2)<---------DEAR3(1) -------->DOF2  <---------CCA1(2)                 <---------ARR11(3)<---------GLK1(2) ---->ANAC58  <---------AHL20(2)                  --------->ARR11(3)<---------ARR14(2)<------MYB83 ---->ANAC58  --------->AHL20(2)    <-----------RAV1(1)<---------AHL20(2)<---------MYB52(2)    <----- >HVH21  --------->ICU4    --------->ZAT18    <---------At4g35610   --------->ARR14(2)<------MYB46(1)   gcaaagtcgtacttatttatatcttattgtggacttttttgttgctgtagatgatatttaagtggatacagattcactaacgtcggctaggtttgatttt  25938200                                                                                   --------->MYB46(3)                                                                                  <---------At5g28300                                                                                  -------->P                                                                                 --------->MYB52(1)                                                                               <---------MYB52(2)                                                                            <---------ZAT14                                                          <---------ANAC46  --------->ZAT18        --                                                <---------ZAT18             <---------ZAT18 <------ZmHOX2a(1)            --------->ANAC46                    --------->ZAT14           --------->ZAT14<---------HSFB2a(2) ----AHL20(2)                                   <---------ZAT14          <---------ZAT6<----------DOF2   atctaacaaaatacacaaaatgatgtgagtttttttttttgggttcttagtggagtcagtgtgtgtattcattcagtgttcactaaccgctctaggaaca  25938300                                                                                            <--------                                                                                            <--------                                                                                            ---------                                                                                           <---------ANAC58                                                                                           --------->RAP2.6(3)                                                                                       --------->At4g35610                                                                                <---------AHL20(2)                                                                            --------->AHL20(2)                                                                            <---------AHL20(2)                                                                           --------->AHL20(1) <------NtERF2                                                                           <---------AHL20(2)------>NtERF2                                                                           --------->AHL20(2)<-------                                                                        <---------AHL20(2) <---------ANAC58         --------->YAB1                                                --------->AHL20(2)  --------->ATERF1(1) ----------->GT1                          <---------ANAC58         <---------YAB1      <---------At4g35610 -------->DOF2        <---------ATHB12    <---------ANAC58       --------->ZAT6 --------->AHL20(2)   aaaaagataaatgaaaatgaactaatcaactccaaacaaattttgcttaagctattggaaaaacatatcactataaatttaataaaatcagttgccggcc  25938400                                                                              --------->TGA2(2)                                                                             <-----------HVH21                                                                             <-----------TGA1                                                                            <<<<<<<<<<HY5                                                                            --------->bZIP60(2)                                                                            <---------O2                                                                            --------->ANAC46                                                                            <---------TGA2(1)  <---------ARR11(3)                                                        --------->TGA2(1)  --------->ARR14(2)                      <---------TOE1(3)                 --------->O2  <---------ARR14(2)                      <---------TOE2(3)                 <---------bZIP60(1)  --------->ARR11(3)                    ---------->DOF2                     --------->bZIP60(1)  <-----------ARR10             --------->YAB1                             <-----------STF1 <---------CCA1(2)             <---------YAB1                            --------->ANAC46 -RAP2.6(2)                   --------->ARR11(3)                    --------->ANAC46 -ATERF1(2)              --------->AHL20(2)                      <---------ZAT18 >ATERF1(2)              <---------AHL20(2)                      <---------ZAT14         <------ZmHOX2a(1) --RAP2.6(3) <---------ATHB12 <---------ARR11(3)                 --------->ZAT14    <-----------GT1 -   ttcaaatcttcaccaataaacttatgttttaatatcataacttaaaggttagaccattaatcgacagtatactaaacgacgtcatttaacaggaaatgag  25938500                                  <---------SPL7                                       ----------->GT1           --------->LBD16    <---------ARR14(2)                                      ---------------         <---------LBD16      --------->ARR14(2)                                     --------->At4g35610        <---------ANAC46   <---------ANAC58                 --------->ZAT18       --------->LBD16        <---------bZIP60(2)<---------ANAC46                 <---------ZAT18      --------->ANAC46     ----------->HVH21     <---------ANAC58              ---------->DOF2         --------->LBD16     ----------->TGA1  <---------ANAC58                 <---------ICU4          <---------HSFB2a(2)   <---------At4g35610 <---------ANAC58                 <---------AHL20(2)      --------------->AGL15   --------->At4g35610 --------->ALFIN1                --------->ICU4          <---------LBD16   <---------ZAT2    --------->ALFIN1                  <---------YAB1          ----------------->AGL1   --------->ZAT2  <---------ANAC58               ----------->GT1         <---------DAG2     <------- --------->DOF2    <---------ANAC58               --------->YAB1 ---------->DOF2--------->HSFB2a(2)   agcaaagctgacgcggattaagcgtgtgtgcgtgtccgaacgaatggcagtatcgtaattaatgcacaaaagctaaccttttcccgaagcagaaaaaaac  25938600                            <---------ANAC58                            <---------ANAC46              <---------YAB1<---------ANAC58             <---------AHL20(1)     --------->ZAT14             --------->ARR11(3)     <---------ZAT14             <---------ARR11(3)    *TSS                        <---------MYB52(1)             --------->AHL20(1)--------->ZAT14               ----------->GT1           --------->ARR11(3)  <---------ZAT14         <---------ATHB12           <---------ARR11(3)--------->ZAT14          ------>MYB46(1)                       <--------           --------->AHL20(1)--------->ZAT18          ------>MYB83            --------->AHL20(2)           <---------AHL20(1)<---------ZAT14        --------->AtMYB61         <---------AHL20(1)  --------->AHL20(2)       <---------------AtSPL8   <---------MYB55(2)        <---------AHL20(2) --------->ANAC81      <-----------RAV1(1)          --------->MYB46(3)       --------->AHL20(2)   <-- ---ID1   --------->YAB1  <---------ANAC46      --------->MYB46(3) <----------DOF2          <--------   aaaataaaacaaaaatatttttgatatgttgtgtacagtatagttgtatcaccaccaatcgacctgttactttgctgtattaaattttggtatacttttt  25938700                                               --------->TOE2(3)                                               <----------DOF2                                          <------ZmHOX2a(2)                                         --------->ARR11(3)                            <---------STY1(2)                                         <---------ARR11(3)                            --------->STY1(2)                         --------->MYB46(3)  <---------YAB1<---------YAB1       <---------At5g28300 -DAG2  --------->AHL20(2)        ------>ZmHOX2a(1)      --------->YAB1     --------->ARR14(2)    <-- --------DOF2         <-----------GT1------>ZmHOX2a(1)  <---------YAB1      <---------ARR14(2)  <---- --DOF2 <---------AHL20(2)        ===============HOX2a_HOX2a               <------ZmHOX2a(1)    -----   ctttcgcttataaattgctctgtatcacccatcttcctcctaagatcatctttaacttattataaaaaaaaaaaacaggattcactgctagctacagaag  25938800                                                                                          <---------TOE1(3)                                                                                          <---------TOE2(3)                              <---------AHL20(2)                                       <---------YAB1                        ----------->GT1                                         --------->YAB1  -----                   ---------->DOF2                                              <---------ANAC55(2) --------DOF2  <------ZmHOX2a(2)         <-----------GT1                        --------->ANAC55(2) -----HSFC1(2)--------->ARR11(3)     <---------AHL20(2)                      ------>ZmHOX2a(1) ------ ---->HSFC1(2)<---------ARR11(3)    <---------AHL20(2)                   <-----------GT1 ---------->DOF2   ctttgatcacatggaagatcgaaaagaggtttttattttttattttctggtctaatcccttcgtcttctgtgttttctccttacataatattaaagttaa  25938900            <---------AHL20(2)        <---------AHL20(2)       --------->AHL20(2)     --------->TOE2(3)                                                                           <---   <-------TEIL         <-------TEIL         <---------YAB1                               ---------->DOF2 ---->DAG2  --------->AHL20(1)              --------->YAB1                     ------->TEIL--------->DAG2 ---->DOF2  --------->AHL20(2)              --------->AHL20(2)                <---------CCA1(2) <----   agtgatacattaaataaaatgggatgttcatgtcaacttcttgcattaatattcgattttgatgtgagaaattagtctctgaatcttggtgaaaaagtct  25939000                     >>>>>>>>>ARR1                     >>>>>>>>>ARR1                     >>>>>>>>>ARR2                     >>>>>>>>>ARR2                   <---------YAB1         <---------WOX13(1)                                                                       ---       --------->ATHB12                                                                       <------      <---------YAB1<------ZmHOX2a(1)                                                         ------- ---------------------ANAC81    <-----------GT1                               <---------AHL20(2)  --- ------DOF2       <---------TOE2(3)<----------DOF2       ---------->DOF2     --------->AHL20(2)   ---   ttttttgtgtgattgatttttaggattgtgtttttttctttctaatggttcttgaaaataaaagtaattgaaatggagatttatttggcagaacaagaac  25939100  Previous    Next  AGI:  At5g64850.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G09960.1); similar to 80C09_15 [Brassica rapa subsp. pekinensis] (GB:AAZ41826.1) Range:  from: 25938635    to: 25940584    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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