Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                   <-----------GT1                                ===========================================MYC_MYB                                ------->GAMYB                               <---------MYB111(1)                               <---------MYB55(2)                               --------->MYB46(3)                               <---------MYB52(2)                               <---------MYB46(2)                                                   <                               <---------MYB111(2)                          ---------->DOF2         <                         --------->ANAC46                                 <----------DOF2          <-                --------->ARR14(2)                                <-----------HVH21                <-                <---------ARR14(2) --------->ZAT6                --------->O2               <-------- -------At4g35610     --------->ZAT14    <----------DOF2         ==================================== ------>At4g35610    <-----------HVH21   ==================================bZIP_DOF     --------->ANAC58 -------ZAT2   <---------At4g35610-------->P                     --------->bZIP60(2)    --------->ANAC58 ------>ZAT2   --------->At4g35610=========================================MYC_MYB      --------->ANAC46 >ZmHOX2a(1)   --------->ZAT2 ------>MYB46(1)                    ====================bZIP_DOF   ----- --->RAV1(2)   <---------ZAT2 ------>MYB83    <-----------GT1    --------->TGA1a    <-----------HVH21   agctgagtcgtcttcccagctccgttcacaccaactaaccctactttctcacctctcttcacttcccatgtcacatctttaagcacagtcacgcctttgt  25936600                                                  <---------MYB52(1)                                               <-----------------AGL3                                            <---------HSFC1(2)                                            --------->At4g35610                                            --------->ZAT2                                            --------->HSFC1(2)                                            --------->HSFB2a(1)                                            <---------HSFB2a(1)                                          <---------GLK1(2)                                       <---------HSFB2a(2)                                       --------->HSFB2a(2)                                      <---------LBD16                                  --------->RVE1(1)                                  --------->CCA1(2)      ------>ZmHOX2a(1)           --------->GLK1(1)                              ------>ZmHOX2a(2)   ---------->ID1                 <---------GLK1(1)                             <------ZmHOX2a(2) ----------DOF2                  <---------ARR14(2)                            --------->ARR14(2) ---------DAG2                   <---------ARR11(3)                    <---------ANAC58 --------ANAC58                  --------->ARR14(2)   <---------HSFB2a(2) --------->ARR14(2) --------ANAC58                  --------->ARR11(3)   --------->HSFB2a(2) <---------ARR14(2) --DOF2                   ----------->RAV1(2)  <-----------------AGL1  <---------ANAC58 ==bZIP_DOF               --------->At4g35610  <-----------------AG <---------MYB52(1)              < ----->ID1              <---------ALFIN1 ---------->DOF2  <---------GLK1(1)    <---------ARR14(2)  <-   agcttttccttatgttctctagcttcacacctgaagatatcccagaagctccgtttttggaactcttcccgtttcgtttccgatcggagtcttgctgaga  25936700                  --------->ARR14(1)                  --------->CCA1(2)                  --------->GLK1(2)       --------->HSFB2a(2)       <---------HSFB2a(2)                                                                  ---------       <---------HSFC1(1)                                                                   <--------       --------->HSFC1(1)                                                                  <---------ARR11(3)   <---------ANAC58                                              <---------ANAC46          --------->ARR11(3)   <---------ANAC46       <---------ANAC58          <---------HSFB2a(2)               <---------ANAC46   <---------ANAC58<-------TEIL----------->HVH21 --------->ARR11(3)    <---------O2 <---------MYB46(3) --------P ---------->DOF2<---------ANAC58   ------->GAMYB     <---------MYB46(3)  <---------AtMYB61 ------GAMYB     --------->ARR11(1)       --------->MYB52(1)  <---------AtMYB61 ----------->HVH21<---   gggttgcttcgagaaaagagattcgatttcgtcttgacgctgtttaacggaggtctcgaggctgatggtggagacttgggctctgatggtggagatatcg  25936800                                                         --------->WRKY12                          --        <------MYB46(1)                                  --------->WRKY38(1)                       --        <------MYB83     <---------YAB1                  --------->ETT(2)                         <--      <--------P      --------->GLK1(2)              <-------TEIL                                 <--     <-------GAMYB   <---------GLK1(2)               ------->TEIL                                <--- >GLK1(1)            --------->ARR11(3)           <---------REM1(1)  ---------->DOF2            ----- -GLK1(1)            <---------ARR11(3)          <---------------AtSPL8             --------->ALFIN1< ------ANAC46       <---------RVE1(1)            <---------------AtSPL3          <---------AtMYB61---   cgtctagggttggaaatggaagagattttgatgaaattggaagggattggagatgtacgtagaccggtgaagaaagttgaacggaggtcgaggctatgga  25936900 ------->ARR14(1)                                                             <---------ZAT2 ------->GLK1(2)                                                              --------->At4g35610 -------ARR14(2)                               --------->ARR14(2)             <---------At4g35610 -------GLK1(2)                                <---------ARR14(2)             --------->ZAT2--------- ------GLK1(1)                                 <-----------ARR10           --------->At4g35610 ------>ARR10                                  --------->GLK1(2)   >>>>>>>>>TBF1      --------->ANAC58 -------TEIL                                  <---------GLK1(2) >>>>>>>>>TBF1----------->RAV1(1) ------>ARR14(2)----------->GT1      --------->ZAT18  <----------DOF2 >>>>>>>>>TBF1   --------->ANAC58   gattcgttgataaacccatggttatatgtagcgatagagagcgcgagagaatctcgctctactgaagaagaagaagaagcagcagagtaagaaaccctcg  25937000                                                                          <---------AHL20(2)                                                          --------->ARR14(2)                                                          <---------ARR11(3)                                                          <---------GLK1(2)                 --------->YAB1                      ----------->RAV1(1)  <---------YAB1              <----------DOF2                        ------>NtERF2<---------AHL20(2)       --------->YAB1                              --------->MYB46(3)  <---------AHL20(2)     <------    --------->GLK1(1)                        <---------ANAC58--------->AHL20(2)             <-------- >TOE1(2)---------->DOF2            *TSS     <---------ANAC58<---------AHL20(2)          <---------AHL20(2)   agagagaaatcaaaagctttgataagagtttctctctatcgttttgagcgtgagccaccagattttatttgatttttttattagtttgtatttttttctc  25937100                          <---------YAB1                         --------->ATHB12                          ------------>CBF                      <---------AHL20(2)                        --------->YAB1                          <---------YAB1                       <---------ATHB12                        <---------AHL20(1)                       --------->ICU4                        <---------TOE2(3)                     --------->WOX13(1)                      <---------YAB1                   <---------YAB1                          --------->AHL20(2)                   ------------>CBF                        <---------AHL20(2)                       -                --------->ICU4                            --------->AHL20(2)                   ------                <---------YAB1                            <---------AHL20(2)                  -------              --------->YAB1            <---------ICU4 <---------AHL20(1)                     <------             <---------YAB1        <---------AHL20(2)  <---------AHL20(2)                     <------          <---------ARR11(3)       --------->AHL20(2)  --------->AHL20(2)        ----------->GT1    <          --------->ARR11(3)   --------->AHL20(2)      --------->AHL20(1)        <----------ID1<----- -----GT1 --------->AHL20(1)  --------->AHL20(2)      --------->AHL20(2)       ---------->DOF2------- ---GT1   <---------AHL20(1)  <---------ATHB12        <---------AHL20(2)   --------->AtMYB61 <-------   tatattcgaaaatatatcattatcaattatcaataaataaaatcaatacttagaaaataaattaatattattgacgaccaaaaaagaaaaacccaataaa  25937200 -------->ARR11(3) --->AHL20(2) -->YAB1 ---AHL20(1) ---AHL20(2)                      ----------->GT1                                           --------- ---------ARR11(3)          --------->YAB1                                                  --------- ----AHL20(2)     --------->AHL20(2)----------->GT1                                   <-----------GT1 -->AHL20(2)      <---------AHL20(2)<---------ZAT6                         <---------------AtSPL8 --ATHB12   --------->YAB1 ----------->GT1  ----------->GT1                --------------->AtSPL8   attatcttcagttatcacaaaaaattggaatgaaaatagtgaaaaatcgaaatatgtatggagcatgaaatatgtatggagtactattttacaataaaaa  25937300                                  <-------GAMYB                                 --------->MYB55(2)      <-------GAMYB              --------->MYB52(2)      <---------ANAC58           --------->MYB111(1)     <------MYB46(1)             --------->MYB111(2)            --------->AHL20(2)     <------MYB83                <---------MYB46(3)           --------->ANAC58     <---------MYB46(3)         <--------P               ----------->HVH21     >>>>>>>>>ARR2 ------->TEIL                 --------->YAB1            <---------WOX13(1)   <---------YAB1 >AHL20(2)   --------->ICU4--------->MYB52(1)        <---------YAB1  <-------TEIL----------->GT1 >YAB1<---------ANAC58    --------->ICU4       <----------DOF2--------->ANAC58 >>>>>>>>>ARR1   atgtatttggttgcaatgtttgtaagtactaatggtagttgtattgcaactttctatgaatgacaagtaaatgcattctacgattgtataattctagttt  25937400                                                                                      --------->ANAC46                                                                                      --------->ANAC58                                                                                      --------->ANAC58                                                                                     <-------MYC3                                                                                     <-------MYC2                                                                                     ------->MYC3                                                                                  ----------->RAV1(1)                                                                    <----------DOF2  ------->MYC2                        ---------->DOF2                      <-----------GT1    ------>NtERF2            <---------YAB1   ---------->DOF2              <---------ICU4   <---------ZAT14   ttgaagaccatattttgatataatgccaaaggaaagaagtgatacaaatcggagtattcatttttactaactttgagttctctgccacatgcaatgcaat  25937500  Previous    Next  AGI:  At5g64840.1    Description:  ATGCN5 (Arabidopsis thaliana general control non-repressible 5). similar to ATGCN2 (Arabidopsis thaliana general control non-repressible 2) [Arabidopsis thaliana] (TAIR:AT5G09930.1); similar to 80C09_14 [Brassica rapa subsp. pekinensis] (GB:AAZ41825.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71760.1); similar to ABCF-type protein [Zea mays] (GB:NP_001105535.1); contains InterPro domain ABC transporter related; (InterPro:IPR003439); contains InterPro domain AAA+ ATPase, core; (InterPro:IPR003593) Range:  from: 25933949    to: 25937036    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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