Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                      ------->MYC3                                                                             ----------->HVH21                                                                           --------->At4g35610                                                                           --------->ZAT2   <--------                           --------->ANAC58                       <---------At4g35610       ---------                           --------->ANAC58                       <---------ANAC58  <-------MYC3             --------->TOE2(3)                                    <---------ANAC58 --------->O2 -------->ANAC58           --------->ANAC46                      <-----------------------TaNAC69(2) -------->ANAC58       --------->AtMYB61                       ----------->HVH21 <---------ALFIN1 -------->ANAC46     -------->P                              <---------ZAT6<---------At4g35610     <- -GT1        --------->TOE1(3)        ---------->DOF2 ---------->DOF2 ----------------------->TaNAC69(2)   ccaagtaatcgaaaaccttaaactaccacaagcaggtttcaaaagctaaatcgatagaaagtagtgtgacctgcttaagctgaccacgtttcttcgagag  25913400                                                                                     <------NtERF2                    --------->HSFB2a(1)                                             ----------->RAV1(1)                    <---------HSFB2a(1)                                           --------->RAP2.3(1)                    --------->HSFC1(2)                               <----------DOF2------>NtERF2                    <---------HSFC1(2)                               <---------DAG2--------->DEAR3(1)         <---------MYB52(1)                                     --------->At4g35610----------->HVH21    <---------ARR11(3)                                          <---------At4g35610<---------ETT(2)    --------->GLK1(2)                                           <---------ZAT2   ------>NtERF2    <---------ARR14(2)                                         --------->MYB52(2)--------->LBD16    --------->ARR14(2)         ------>ZmHOX2a(1)              <--------P        <---------ANAC46 -HSFB2a(2) <-------GAMYB   <---------ATHB12---------->DOF2  <---------MYB52(1)<---------LBD16 >HSFB2a(2)<---------MYB46(3) --------->TOE2(3)        --------->GLK1(2)     <---------ARR14(2) ------TEIL--------->MYB52(2) --------->TOE1(3)       <---------GLK1(2)      --------->ARR14(2)   attcaaaatctgttcgttgagaagtttccaatccttagcttcgaaacaaagcttaagaatctcggtagctgcttttctagttccggcgacattttctgcg  25913500                                --------->WOX13(1)                              <------ZmHOX2a(2)                              <---------ATHB12                              --------->ANAC58                         --------->At4g35610                                --------->ANAC46                         <---------At4g35610                                --------->ANAC58                        --------->DEAR3(1)                                <-----------GT1                      --------->At4g35610                            --------->YAB1                      <---------At4g35610                           <---------ATHB12                      --------->ZAT2    <---------ARR14(2)        --------->WOX13(1)                      <---------ZAT2    --------->ARR14(2)     ------>ZmHOX2a(1)    <---------At4g35610--------->MYB46(3)              <----------DOF2   <---------ATHB12   agcctcatctgtttctcttcgttcagcagccgatcaatcgacgattcgagttgtctactttcttcctgcaatcaaatcacgacatcgaatttgacaaacc  25913600                                              ----------->GT1                                             ------>ZmHOX2a(2)                                            --------->CCA1(2)                                            <------ZmHOX2a(2)                        <---------ICU4                                           --------->ARR14(2)                   <------NtERF2                                           --------->AGP1                      --------->LBD16                                           <---------ARR11(3)                  ------>NtERF2                                           <---------ARR14(2)                 <---------LBD16                ---------->DOF2            --------->ARR11(3)                 --------->LBD16       --------->ANAC58                    <---------AGP1                  --------->ANAC46       --------->ANAC58                   <---------CCA1(2) <---------ANAC58  <---------ANAC46      --------->SPL7             ----------->GT1            <---------ANAC58 <---------LBD16  -------   aaaattcgaacggaagagaaaagagagagagagagttgaaaatcagatctgtgaaatcggagacttgccattgctaaacgccgggaatcaatactccgag  25913700                                                                                           ------>MYB83                          --------->LBD16               <---------ZAT14                    -------->P                     <----------DOF2                    <-------TEIL                       ------>MYB46(1)               <---------ZAT6                           --------->ZAT18                   <---------ALFIN1             ----------->GT1                            --------->ZAT14       <---------ANAC46 -->LBD16<---------ZAT6 <---------LBD16    <-----------GT1             <-----------ARR10 <---------ALFIN1   agagagaagaagagttagtgaaactttccggtgatgaaacagatttaacttctaaaggttcactgagagagagaatgttagcgtcgaaaccccaacccct  25913800                                                                <---------TOE2(3)                                        <---------TOE2(3)       <---------TOE1(3)                                       <-----------GT1         <-----------GT1              <---------At4g35610   --------->YAB1         <----------DOF2                     ------        *TSS  --------->At4g35610   <---------ICU4 <------------CBF                  <---------ANAC46      ---------->DOF2              --------->ICU4 <---------AHL20(2)                <---------AtMYB61   --------->ANAC58                <---------YAB1 --------->ATHB12               <----------DOF2   --------->ANAC58            <---------MYB59   <---------AHL20(2)      <---------ZAT6 <---------ZAT18   tgaacaagaaaagcttagctcagactatttgggcctaattataacgttttatttattgggacttttaacgaaatagtgtaagacttttggtgtacatatg  25913900                                                    ----------->RAV1(2)                                                    <------NtERF2                                                    <---------ANAC46                                                   ------>NtERF2                                                  --------->ETT(2)                                                  <---------ETT(2)                                                <-----------HVH21                <------MYB46(1)                                               <-----------RAV1(1)               <------MYB83                                               =================RAV              ----------->GT1                                             ----------->RAV1(2)                 <---------ANAC46                                            ------>MYB46(1)                     <---------MYB46(3)                                            ------>MYB83                        --------->MYB59                             --------->ICU4 --------->MYB52(1)                 <---------ANAC46                        <---------ANAC55(2) -------->P                      <-----------RAV1(1)                        <------MYB46(1)    --------->MYB55(1)               <---------MYB46(3)                        ----------->GT1   <---------MYB46(2)           ---------->DOF2           ----       --------->GLK1(2)<------MYB83      <---------MYB111(1)     --------->ANAC58               ----  ---------->DOF2      --------->MYB59    <---------MYB59         --------->ANAC58           <------- --->ANAC55(2) <---------ANAC46        <-----------GT1      <-----------HVH21 <---------MYB52(1) ----   taataaaagtatctattgggtctattaggtaaatattgaataaacctacctgtcgcctgtagggtcatacccaaatagctgttgggtaatatgttatgaa  25914000                      <---------AHL20(2)           <-------TEIL           ------>ZmHOX2a(2)          <------ZmHOX2a(2)   --------->ARR11(3)         --------->ARR14(2)   --------->GLK1(2)         <---------ARR14(2)   <-----------ARR10 ----->ANAC58         --------->AHL20(2)        <---------------AGL15 ----->ANAC46        --------->ICU4    <-------TEIL --YAB1 <------ZmHOX2a(1) --------->YAB1       ----------------->AGL1       --------->ATHB51 ----->ANAC58   --------->YAB1<---------ARR11(3)--------------->AGL15       <---------ICU4  <------NtERF2   cgaaactataggatccatttgtaataaatgaaaatctaaggtccatatggcccatttgagtaagttttttaaggcccattatcgctcgagcctcggcaac  25914100                                         <-----------GT1                                <------------------------ANAC81                             <---------LBD16                            <---------ANAC58                                                <--------                --------->GLK1(2)   <---------AHL20(2)                                  <---------ARR11(3)        --------->MYB52(1)  <---------ANAC46    <----------DOF2                       --------->ICU4      --------->At5g28300   <---------ANAC58<----------DOF2  <---------ALFIN1         <---------YAB1    --------->ZAT6 --------->WOX13(1)   <<<<<<<<<<GT-3b   ------>ZmHOX2a(1)      <-----------GT1  <--   tctctaacagtaacagaaaatccatcaattgctcggatttatttttctttcttttgaatccttccacttgcagtagagaaatttcaccatgattttactg  25914200                                         --------->HSFB2a(2)                             --------->YAB1             --------->AHL20(2)      <---------ANAC58             <---------AHL20(2)      <---------ANAC58     --------->ZAT6        --------->ANAC58 ---GT1     <---------AHL20(2) <---------YAB1                        ------->TEIL            -------- -------ANAC46             --------->ANAC58                       <---------ATHB12  ------>ZmHOX2a(1)   acttataagactaatttatatgttaagacaaggattattgtttgtggaactacaaaattaagacactaatgaatttaagttctatccttctaaatgaaag  25914300  Previous    Next  AGI:  At5g64760.1    Description:  26S proteasome regulatory subunit, putative (RPN5). similar to EMB2107/MSA/RPN5A (EMBRYO DEFECTIVE 2107) [Arabidopsis thaliana] (TAIR:AT5G09900.2); similar to EMB2107/MSA/RPN5A (EMBRYO DEFECTIVE 2107) [Arabidopsis thaliana] (TAIR:AT5G09900.1); similar to 52O08_14 [Brassica rapa subsp. pekinensis] (GB:AAZ67560.1); similar to unknown [Populus trichocarpa] (GB:ABK95699.1); contains InterPro domain Winged helix repressor DNA-binding (InterPro:IPR011991); contains InterPro domain Proteasome component region PCI (InterPro:IPR000717) Range:  from: 25911006    to: 25913808    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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