Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                 <-----                                                                                               ------                                                                                               <-----                                                                                         <---------ICU4                                                                                        <---------AHL20(2)                                                                                     <---------AHL25(3)                                                                                    <---------AHL25(1)                                                                                    --------->AHL25(1)                                                                                    --------->AHL12(1)                                                                                    --------->AHL25(2)                                                                                    <---------AHL25(2)                                                                                    --------->AHL25(3)                                                                                    <---------AHL25(3)                                                                                    <---------AHL12(1)                                                                                    <---------AHL20(1)                                                                                    --------->AHL20(2)                                                                                    <---------AHL20(2)                                                                                    --------->AHL12(3)                                                                                    <---------AHL20(3)                                                                                   --------->AHL25(3)                                                                                  --------->WOX13(2)                                                                                  <---------WOX13(2)                                                                                  --------->AHL12(2)                                                                                 <---------ICU4------                                                                                --------->AHL12(1)  <                                                                                <---------AHL12(1)  -   ------>NtERF2                                                              --------->YAB1<-------- ----YAB1                <-----------GT1                                      --------->ANAC55(2)  -- -ARR11(2)   <-----------GT1             <-----------GT1                      --------->ANAC46 ------ >ARR11(2) <---------AHL20(2)    ---------->DOF2            ----------->HVH21<-------TEIL--------->YAB5   aatgcctccatattttaacagtgtttataacttcttaaagtttttactatgcaagttgtcttatgacacagagctaatatacataattaattcattacct  25908300       --------->WOX13(2)     --------->AHL12(3)     <---------AHL12(1)     <---------AHL20(2)     --------->AHL20(2)     <---------AHL25(3)                                                                --------->WOX13(2)     <---------AHL12(3)                                                               <---------ICU4     --------->AHL25(3)                                                              --------->AHL20(3)     <---------AHL25(2)                                                              <---------AHL20(3)     --------->AHL25(1)                                                              <---------YAB1     --------->AHL12(1)                                                              --------->AHL25(1)     <---------AHL25(1)                                                              --------->AHL20(2)    --------->AHL25(3)                                                               <---------AHL20(2)    --------->AHL20(2)                                                               <---------AHL12(1)   --------->AHL12(2)                                                                <---------AHL12(3)   --------->WOX13(2)                                                                <---------AHL25(1) <---------AHL12(3)                                                                  --------->AHL12(3) <---------AHL20(2)                                                                  --------->AHL12(1) --------->AHL20(3)                                                                 --------->AHL25(3) --------->AHL20(2)                                                                <---------AHL12(2) --------->AHL25(1)                                                                --------->AHL12(2) <---------AHL12(1)                                                               <---------AHL20(1) --------->AHL12(3)                                                               <---------AHL25(3) <---------AHL25(3)                                                               --------->AHL20(1) <---------AHL20(3)                                                              --------->AHL12(1) <---------AHL25(1)                                                              <---------AHL12(1) --------->AHL12(1)                                                              --------->AHL25(1) ----DAG2--------->AHL20(2)                                                      <---------AHL12(3) --->TOE1(3)                                                                     --------->AHL20(2) ----MYB59<-----------GT1                                                        --------->AHL12(3) --------->AGL15                                                                --------->AHL12(2) ---------AHL20(2)                                                  <---------AHL20(1)--------->YAB5 -------->AHL25(3)                                            <---------KAN1   --------->AHL20(3) ---GT1<---------WOX13(2)                               <-----------HVH21      --------->AHL20(2) ------->AHL12(2)       <---------TOE2(3)           <---------ARR11(2)   <-----------GT1 --->TOE2(3)           ---------->DOF2             <---------KAN1----------->GT1<---------AHL12(2)   tatttatttaatttactagacttgttaaagtattcttcagaactgttcatagagtataggtcgcatatagtatatttacaaaaatatataattactcaca  25908400                                          <---------AHL12(2)                                         <---------AHL20(2)                  <---------ANAC55(2)    --------->AHL25(2)                 <-------TEIL            --------->AHL12(1)                --------->ARR14(1)       <---------AHL12(1)                --------->CCA1(2)        --------->AHL20(2)               --------->ARR14(2)        <---------AHL25(2)               <---------ARR14(2)        --------->AHL25(3)               <---------ARR11(2)   <---------MYB59               <---------GLK1(2)   --------->ANAC58               --------->ARR11(2)  --------->ANAC58               <---------RVE1(2) <------ZmHOX2a(1)           <-------TEIL    <---------YAB1--------->AHL25(1)              --------->YAB1          --------->CCA1(2)<---------AHL20(2)                           <---------ATHB12       --------->DOF5.7(1)--------->AHL20(2)                     ----------->GT1      <---------AHL12(1)     ---------->DOF2    --------------->AGL15<-----------GT1 --------->WOX13(2)     ------>MYB46(1)  <---------ANAC46--------->ANAC55(2)    --------->AHL20(3)  <---------WOX13(2)     ------>MYB83   agttgcgaaaagattcagatacgtttcatataataggacccaattttttacaaaatttgttcaaattgagttaaatcatcaaaaccaaattttcttctgt  25908500                                                    --------->AHL20(2)                                                    --------->AHL12(3)                                                    <---------AHL20(2)                                                  --------->AHL12(3)                                                  <---------AHL20(2)                                                  --------->AHL20(2)                                                  <---------AHL12(3)                                                <---------AHL20(2)                                                --------->AHL12(3)                                                <---------AHL12(3)                                                --------->AHL20(2)                                              <---------AHL12(3)                                              --------->AHL12(3)                                              <---------AHL20(2)                                              --------->AHL20(2)                                            --------->AHL12(3)                                            <---------AHL12(3)                                            <---------AHL20(2)                                            --------->AHL20(2)              --------->AHL20(3)          --------->AHL12(3)              --------->AHL20(2)          --------->AHL20(2)              <---------AHL20(2)          <---------AHL20(2)              <---------AHL12(3)          <---------AHL12(3)              <---------AHL20(3)        --------->AHL20(2)              --------->AHL12(3)        <---------AHL20(2)             <---------AHL20(2)       -----             --------->YAB1             <---------AHL12(3)             --------->AHL20(2)       <----         <---------AHL25(3)             --------->AHL12(3)           <---------YAB1             <----         <---------AHL20(2)           --------->AHL12(3)          <---------YAB5         <---------ARR11(2)         --------->AHL20(2)           <---------AHL12(3)     --------->TOE2(3)      <---------ANAC58        --------->AHL20(2)            --------->AHL20(2)    <---------ICU4          <---------ANAC58        --------->AHL20(3)            <---------AHL20(2)   <---------YAB5           <---------ANAC46<   <------ZmHOX2a(2)               <---------AHL20(2)   <---------AHL20(2)  <---------AHL12(2) <-----  <---------GATA12                --------->AHL20(2)<---------AHL12(3)--------->AHL20(2) --------->ARR11(2)   tatagatcaaatttataaaaatagctatttgctatattatatatatatatatatatatataaacattagttattaaaaaaaaaactgcgtgtttccagtt  25908600                                                                            --------->AHL20(2)                                                                            --------->AHL20(1)                                                                            --------->AHL25(2)                                                                            <---------AHL25(3)                                                                            --------->AHL25(3)                                                                            --------->AHL25(1)                                         <------NtERF2                      <---------AHL25(1)                                        <---------At4g35610                 <---------AHL12(3)                                        ------>NtERF2                       <---------AHL25(2)                                        --------->At4g35610                 <---------AHL20(2)                                       <---------DEAR3(1)                   --------->AHL12(3)                                       <---------ANAC46                     <---------AHL20(1)                                      --------->RAP2.3(1)                  <---------AHL25(1)                                      --------->ATERF1(1)                  --------->AHL20(2)                                      <------NtERF2                        --------->AHL25(1)                                     <---------ATERF1(1)                   <---------AHL20(2)                                     <---------ORA47(2)                    <---------AHL25(3)                                     <---------RAP2.3(1)                   --------->AHL25(3)                                     <---------DEAR4(2)                    <---------AHL25(2)                                     <---------RRTF1(1)                    --------->AHL25(2)                                     <---------RAP2.6(1)                   --------->AHL12(1)                                     <---------ERF1                        --------->AHL12(3)                                    <---------RAP2.3(2)                    <---------AHL12(1)                                    <---------DEAR3(1)                   --------->AHL12(2)                                    <---------DREB2C(2)                  <---------AHL12(2)                                    <---------RRTF1(2)          --------->ZAT6           --------->WOX13(1)                                    <---------RAP2.6(2)    <---------AHL12(2)         <---------ARR11(3)      <---------ZAT14       <---------YAB1      <---------------AGL15    --------->WOX13(2)      <-------TEIL ------>NtERF2    <---------RAP2.3(3)    <---------WOX13(2)         --------->RVE1(2) ---->ZAT14       --------->DEAR3(1)--------->ATERF1(2)    --------->WOX13(2)<---------AHL12(2) -----ZAT14       --------->RAP2.6(2)------>NtERF2   ---------->DOF2--------->ANAC58  --------->ARR11(3) -----ZAT18      --------->DEAR3(2) <---------RRTF1(3)   --------->AHL20(2)<---------AHL12(3) ------- ---------LBD16 --------->At4g35610 <---------ATERF1(2)----------->GT1   <---------WOX13(2)   <------ ------HVH21   --------->GLK1(2)   <---------LBD16--------->AtLEC2  --------->ANAC58 <---------CCA1(2)   cacacgggtacagagagaagccgactcattttcatttggcggcgctgaaaccatacaaagtaattaacacaagaaaattaaatttgtatatctatcagct  25908700                                                <----------DOF2        <---------ANAC58            ---------->ID1                  <----------DOF2            <---------ANAC58        ------>ZmHOX2a(1)                  <---------DOF5.7(1)         <---------ANAC46        <----------DOF2            <---------ARR11(3)         ---------->ID1   --------->TOE1(1)               --------->ARR11(3)     <----------DOF2   --------->TOE2(1)               --------->RVE1(2)     <---------DOF5.7(1) -->At4g35610                   *TSS--------->RVE1(1)   ------>ZmHOX2a(1)                     ------- ---At4g35610                  --------->HSFB2a(2) <------------------------ANAC81            <------   aaacctcgtcctttgtcttaaaaaacacatcttctaaaatctctgtctttctttcttcctctttgtctctgtttcttgtttctctctctctctctctaca  25908800                                          <-----------GT1                                       <---------WOX13(2)                                       <---------AHL12(2)                                       --------->AHL12(2)                                     --------->AHL25(1)                                     <---------AHL25(1)                                     <---------AHL25(2)                                     <---------AHL25(3)                                     <---------AHL20(2)                                     --------->AHL25(2)                                     --------->AHL12(3)                                     <---------AHL12(3)                                     --------->AHL25(3)                                     --------->AHL12(1)                                     <---------AHL12(1)                                     --------->AHL20(2)                                    <---------AHL20(1)                                    --------->AHL20(1)                                    <---------AHL20(2)                                    <---------AHL25(3)                                    --------->AHL25(3)                                    <---------AHL25(1)                                    --------->AHL25(1)                                    --------->AHL20(2)                                    --------->AHL12(3)                                    <---------AHL12(3)                                    <---------AHL25(2)                                    --------->AHL25(2)                                   --------->AHL12(2)                                  --------->WOX13(2)                                <---------AHL20(2)                               <---------AHL20(2)                               --------->AHL20(2)                           --------->AHL25(2)                           <---------AHL12(2)                           --------->AHL12(3)                           <---------AHL12(3)                          --------->AHL12(1)                          --------->AHL20(3)                          <---------AHL20(3)                          <---------ARR11(3)                          --------->AHL12(2)                          --------->ARR11(3)                          --------->AHL25(2)                                             --------->DOF5.7(1)                          <---------AHL25(2)                                     <---------GATA12                          <---------AHL12(1)                                     --------->ARR14(2)                          <---------AHL20(1)                                     <---------ARR14(2)                          --------->AHL20(1)                                    <------ZmHOX2a(1)                         <---------KAN1--------->WOX13(2)                    <------ZmHOX2a(1)     <----------DOF2     <---------AHL12(1)                               <------ZmHOX2a(1) -->ZAT14                --------->AHL12(1)      <---------ANAC46      <---------At4g35610<------ZmHOX2a(1) ---ZAT14          ---------->DOF2<---------WOX13(2)        <----------DOF2--------->ALFIN1   gagttttctttccctcgaagaaaaagaatatttttaaatttaattttctctgcgtttataagctttaagtttcagaggaggaggatttagaaggagggtt  25908900                                                                                  --------->DOF5.7(2)                                                                               <---------TOE2(2)                                                                               <---------TOE1(2)                                                                               --------->SPL7(1)                                                                            --------->TOE1(1)                                                --------->DOF5.7(1)        --------->At4g35610                                               --------->DOF5.7(1)      <---------YAB5                                               --------->DAG2           <---------YAB1                                   <---------TOE1(3)                   <---------ARR11(3)                                   <---------TOE2(3)                   --------->ARR11(3)                        <---------ATHB12      ---------->DOF2         --------->YAB1                  ----------->GT1 --------->MYB52(1)                  --------->YAB5 --------->At4g35610              --------->DAG2      <---------DOF5.7(2)                <---------YAB1  <---------At4g35610             ---------->DOF2    --------->ARR11(3)        <---------WOX13(2)--------->TOE2(1)   <----         <---------ANAC46   <------ZmHOX2a(1) --------->DOF5.7(1)  --------->YAB5 <---------MYB52(1)   ttgtatgtgtgtcttaaaagtggcaaatcaggaagataacgttggcaaaaaagccgagtctattagagacgatgatcatcggacgttatctgaaatcgat  25909000                                                                 ------>NtERF2                                                                --------->DEAR3(1)                                                               --------->ATERF1(1)                                                               <------NtERF2                                                               --------->RAP2.3(1)                                                              ------>NtERF2                                                              <---------ATERF1(1)                                                             --------->RAP2.3(2)                                                             --------->RAP2.6(2)                                                             --------->RAP2.3(3)                                                             --------->DEAR3(1)                                                             ------->GAMYB                                                            --------->ERF1                                                            --------->RAP2.3(1)                                                           --------->ZAT2                                                           --------->At4g35610                                                           <---------ATERF1(1)                                                           <---------At4g35610                                            <---------ANAC58--------->MYB46(3)                                            <---------ANAC58--------->ATERF1(1)                  ------>NtERF2     --------->DEAR3(1)    --------->DEAR3(1)                  --------->ZAT2 <---------ALFIN1        --------->ATERF1(1)                  --------->At4g35610<-----------HVH21   --------->MYB46(3)                  <---------At4g35610<-----------TGA1   --------->ZAT2                 --------->DEAR3(1) --------->DREB2C(2) <---------ZAT2              <---------CCA1(2)          --------->KAN1         --------->AtMYB61      --------->At4g35610      ------>ZmHOX2a(1)        --------->ANAC55(2)      --------->DEAR3(1)     <---------At4g35610  <---------SPL7(1) <-----    <----------DOF2             --------->MYB46(3)  --------->ANAC58       --------->ATERF1(1) <-----   <---------ANAC58             <---------MYB55(2)  --------->ANAC46       <---------YAB5 --------->RVE1(2)   <---------ANAC58          --------->MYB46(3)     --------->ANAC58       <------NtERF2 <---------CCA1(2) --ZmHOX2a(2) --------->ANAC46--------->AtMYB61    --------->SPL7(1)     <---------DEAR3(1)   <------   caatggctttacttattcgcagccgaagacgaccaccaccgtcatagcttccctacgcagcagccgcctccatcgtcgtcgtcctcatctcttatctcag  25909100                                                                                                <----                                                                                                -----                                                                                               ------                                                                                           <---------TOE1(3)                                                                                        ----------->HVH21                                                                                        --------->ALFIN1                                                                                       --------->At5g28300                                                                   ------>ZmHOX2a(1)   <------NtERF2                                                             --------->HSFB2a(1)     <---------ANAC46                                                       --------->HSFB2a(2)           --------->ALFIN1                                                      <---------ANAC58               <---------DEAR3(1)                                                      <---------ANAC46              <------NtERF2<---          --------->CCA1(2)                      <-----------RAV1(1)                --------->ATERF1(1)         xxxxxxxxxxxxxxxx>smallRNA(i)  --------->WRKY38(1)   <---------HSFB2a(1)    <---------ABI4(1) ----TOE2(2)                           --------->WRKY45<---------HSFB2a(2)        --------->ALFIN1--- ----TOE1(2)           <---------At4g35610    <---------O2   --------->KAN1       <---------DEAR3(1) -----RAV1(2)   <---------At4g35610  <----------DOF2  <---------ANAC58--------->At4g35610  <---------TOE2(3)   gtttcagtagagagatggagatgtctgctattgtctctgctttgactcacgttgttgctggaaatgttcctcagcatcaacaaggaggcggtgaaggtag  25909200  Previous    Next  AGI:  At5g64750.1    Description:  ABR1 (ABA REPRESSOR1); DNA binding / transcription factor. Identical to Ethylene-responsive transcription factor ABA REPRESSOR 1 (ABR1) [Arabidopsis Thaliana] (GB:Q9FGF8); similar to DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT5G50080.1); similar to 80C09_8 [Brassica rapa subsp. pekinensis] (GB:AAZ41819.1); contains InterPro domain DNA-binding, integrase-type; (InterPro:IPR016177); contains InterPro domain Pathogenesis-related transcriptional factor and ERF, DNA-binding; (InterPro:IPR001471) Range:  from: 25908732    to: 25911114    Orientation: Forward Links:  TAIR  MIPS  AIP      Please cite the corresponding publications when using AthaMap.
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