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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
------
<-----
<-----
<---------
AHL20(2)
<---------
AHL20(1)
--------->
AHL20(2)
<---------
AHL20(2)
<---------
ICU4
------
--------->
YAB1
<--------
<-----------
GT1
--------->
ANAC55(2)
<
------>
NtERF2
<-----------
GT1
<-----------
GT1
--------->
ANAC46
------
----
YAB1
<---------
AHL20(2)
---------->
DOF2
----------->
HVH21
<-------
TEIL
<---------
ICU4
aatgcctccatattttaacagtgtttataacttcttaaagtttttactatgcaagttgtcttatgacacagagctaatatacataattaattcattacct
25908300
--------->
AHL20(2)
<---------
AHL20(2)
--------->
AHL20(2)
--------->
AHL20(2)
--------->
AHL20(2)
<---------
AHL20(2)
<---------
AHL20(2)
--------->
AGL15
<---------
YAB1
----
DAG2
<---------
AHL20(1)
----
MYB59
<-----------
GT1
--------->
AHL20(1)
--->
TOE1(3)
--------->
AHL20(2)
---
GT1
--------->
AHL20(2)
<---------
AHL20(1)
<---------
ICU4
---------
AHL20(2)
<---------
TOE2(3)
----------->
GT1
--------->
AHL20(2)
--->
TOE2(3)
---------->
DOF2
<-----------
HVH21
<-----------
GT1
tatttatttaatttactagacttgttaaagtattcttcagaactgttcatagagtataggtcgcatatagtatatttacaaaaatatataattactcaca
25908400
<---------
YAB1
--------->
ANAC55(2)
<-------
TEIL
--------->
CCA1(2)
--------->
AHL20(2)
--------->
ARR14(1)
<---------
MYB59
<---------
ARR14(2)
--------->
ANAC58
<---------
GLK1(2)
--------->
ANAC58
--------->
ARR14(2)
<------
ZmHOX2a(1)
<-------
TEIL
--------->
AHL20(2)
------>
MYB46(1)
--------->
CCA1(2)
<---------
AHL20(2)
--------->
YAB1
---------->
DOF2
--------------->
AGL15
<-----------
GT1
<---------
ATHB12
<---------
ANAC46
<---------
ANAC55(2)
<---------
AHL20(2)
----------->
GT1
------>
MYB83
agttgcgaaaagattcagatacgtttcatataataggacccaattttttacaaaatttgttcaaattgagttaaatcatcaaaaccaaattttcttctgt
25908500
<---------
AHL20(2)
<---------
AHL20(2)
--------->
AHL20(2)
--------->
AHL20(2)
<---------
AHL20(2)
<---------
AHL20(2)
--------->
AHL20(2)
--------->
AHL20(2)
<---------
AHL20(2)
<---------
AHL20(2)
--------->
AHL20(2)
--------->
AHL20(2)
<---------
AHL20(2)
<----
<---------
AHL20(2)
--------->
AHL20(2)
--------->
AHL20(2)
<----
--------->
YAB1
<---------
AHL20(2)
<---------
YAB1
-----
<---------
AHL20(2)
<---------
AHL20(2)
--------->
TOE2(3)
<---------
ANAC46
--------->
AHL20(2)
--------->
AHL20(2)
<---------
ICU4
<---------
ANAC58
--------->
AHL20(2)
<---------
AHL20(2)
<---------
AHL20(2)
<---------
ANAC58
<
<------
ZmHOX2a(2)
--------->
AHL20(2)
--------->
AHL20(2)
--------->
AHL20(2)
<-----
tatagatcaaatttataaaaatagctatttgctatattatatatatatatatatatatataaacattagttattaaaaaaaaaactgcgtgtttccagtt
25908600
<------
NtERF2
<---------
At4g35610
--------->
At4g35610
------>
NtERF2
<---------
DEAR3(1)
<---------
ANAC46
--------->
RAP2.3(1)
<------
NtERF2
--------->
ATERF1(1)
<---------
ATERF1(1)
<---------
DEAR4(2)
------>
NtERF2
<---------
RAP2.3(1)
<---------
RAP2.6(1)
<---------
ORA47(2)
<---------
ERF1
---------->
DOF2
<---------
RAP2.3(3)
<---------
RAP2.6(2)
<---------
RRTF1(2)
--------->
WOX13(1)
<---------
RAP2.3(2)
--------->
AHL20(2)
<---------
RRTF1(3)
--------->
AHL20(1)
<---------
ZAT14
<---------
YAB1
<---------------
AGL15
<---------
AHL20(2)
<-------
TEIL
------>
NtERF2
<---------
DREB2C(2)
<---------
AHL20(1)
-----
ZAT18
--------->
DEAR3(1)
--------->
ATERF1(2)
--------->
ANAC58
<---------
ARR11(3)
-----
ZAT14
--------->
RAP2.6(2)
<---------
RRTF1(1)
--------->
ZAT6
--------->
ARR11(3)
---->
ZAT14
--------->
DEAR3(2)
<---------
DEAR3(1)
--------->
AHL20(2)
--------->
AHL20(2)
-------
---------
LBD16
--------->
At4g35610
<---------
ATERF1(2)
----------->
GT1
<---------
AHL20(2)
<------
------
HVH21
--------->
GLK1(2)
<---------
LBD16
--------->
AtLEC2
--------->
ANAC58
<---------
CCA1(2)
cacacgggtacagagagaagccgactcattttcatttggcggcgctgaaaccatacaaagtaattaacacaagaaaattaaatttgtatatctatcagct
25908700
---------->
ID1
<---------
ANAC58
<----------
DOF2
<----------
DOF2
<---------
ANAC46
------>
ZmHOX2a(1)
<----------
DOF2
<---------
ANAC58
--------->
TOE2(1)
--------->
ARR11(3)
---------->
ID1
--------->
TOE1(1)
<---------
ARR11(3)
<----------
DOF2
-->
At4g35610
*
TSS
--------->
RVE1(1)
------>
ZmHOX2a(1)
<------
---
At4g35610
--------->
HSFB2a(2)
<------------------------
ANAC81
-------
aaacctcgtcctttgtcttaaaaaacacatc
ttctaaaatctctgtctttctttcttcctctttgtctctgtttcttgtttctctctctctctctctaca
25908800
<-----------
GT1
<---------
AHL20(2)
--------->
AHL20(2)
--------->
AHL20(2)
<---------
AHL20(1)
--------->
AHL20(1)
<---------
AHL20(2)
--------->
AHL20(2)
<---------
ARR14(2)
<---------
AHL20(2)
--------->
ARR14(2)
--------->
AHL20(1)
<------
ZmHOX2a(1)
<---------
AHL20(1)
<------
ZmHOX2a(1)
<----------
DOF2
<---------
ARR11(3)
<------
ZmHOX2a(1)
---
ZAT14
--------->
ARR11(3)
<---------
ANAC46
<---------
At4g35610
<------
ZmHOX2a(1)
-->
ZAT14
---------->
DOF2
<---------
AHL20(2)
<----------
DOF2
--------->
ALFIN1
gagttttctttccctcgaagaaaaagaatatttttaaatttaattttctctgcgtttataagctttaagtttcagaggaggaggatttagaaggagggtt
25908900
--------->
DOF5.7(2)
<---------
MYB52(1)
--------->
SPL7
<---------
TOE1(2)
<---------
TOE2(2)
--------->
TOE2(1)
<---------
TOE2(3)
--------->
TOE1(1)
<---------
TOE1(3)
--------->
At4g35610
<---------
ATHB12
--------->
DAG2
<---------
YAB1
----------->
GT1
--------->
MYB52(1)
<---------
ARR11(3)
--------->
DAG2
<---------
DOF5.7(2)
--------->
ARR11(3)
<----
---------->
DOF2
--------->
ARR11(3)
--------->
YAB1
<---------
At4g35610
<---------
ANAC46
<------
ZmHOX2a(1)
---------->
DOF2
<---------
YAB1
--------->
At4g35610
ttgt
atgtgtgtcttaaaagtggcaaatcaggaagataacgttggcaaaaaagccgagtctattagagacgatgatcatcggacgttatctgaaatcgat
25909000
--------->
DEAR3(1)
--------->
ATERF1(1)
--------->
RAP2.3(1)
<------
NtERF2
------>
NtERF2
<---------
ATERF1(1)
--------->
RAP2.6(2)
------->
GAMYB
--------->
RAP2.3(3)
--------->
DEAR3(1)
--------->
RAP2.3(2)
--------->
ERF1
--------->
RAP2.3(1)
--------->
At4g35610
--------->
ZAT2
<---------
At4g35610
<---------
ATERF1(1)
<---------
ANAC58
--------->
MYB46(3)
<---------
ANAC58
--------->
ATERF1(1)
--------->
DREB2C(2)
--------->
DEAR3(1)
--------->
ZAT2
<---------
ALFIN1
--------->
MYB46(3)
<---------
At4g35610
<-----------
HVH21
--------->
ATERF1(1)
------>
NtERF2
--------->
DEAR3(1)
<---------
At4g35610
--------->
At4g35610
<-----------
TGA1
--------->
ZAT2
--------->
DEAR3(1)
--------->
DEAR3(1)
--------->
At4g35610
<---------
CCA1(2)
--------->
ANAC55(2)
--------->
AtMYB61
<---------
ZAT2
<---------
SPL7
<-----
<----------
DOF2
<---------
MYB55(2)
--------->
ANAC46
--------->
ATERF1(1)
<-----
<---------
ANAC58
--------->
MYB46(3)
--------->
ANAC58
<------
NtERF2
<---------
CCA1(2)
<---------
ANAC58
--------->
MYB46(3)
--------->
ANAC58
<---------
DEAR3(1)
<------
--
ZmHOX2a(2)
--------->
ANAC46
--------->
AtMYB61
--------->
SPL7
------>
NtERF2
------>
ZmHOX2a(1)
caatggctttacttattcgcagccgaagacgaccaccaccgtcatagcttccctacgcagcagccgcctccatcgtcgtcgtcctcatctcttatctcag
25909100
-----
<----
------
<---------
TOE1(3)
--------->
ALFIN1
----------->
HVH21
--------->
At5g28300
<------
NtERF2
------>
ZmHOX2a(1)
<---------
ANAC46
--------->
HSFB2a(2)
--------->
ALFIN1
<---------
ANAC46
<---------
DEAR3(1)
<---------
ANAC58
<---------
ABI4(1)
--------->
CCA1(2)
<-----------
RAV1(1)
<------
NtERF2
<---
xxxxxxxxxxxxxxxx>
smallRNA(i)
--------->
WRKY45
<---------
HSFB2a(2)
--------->
ATERF1(1)
----
TOE1(2)
--------->
WRKY38(1)
<---------
HSFB2a(1)
<---------
DEAR3(1)
----
TOE2(2)
<---------
At4g35610
<---------
O2
--------->
HSFB2a(1)
--------->
ALFIN1
---
-----
RAV1(2)
<---------
At4g35610
<----------
DOF2
<---------
ANAC58
--------->
At4g35610
<---------
TOE2(3)
gtttcagtagagagatggagatgtctgctattgtctctgctttgactcacgttgttgctggaaatgttcctcagcatcaacaaggaggcggtgaaggtag
25909200
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AGI:
At5g64750.1
Description:
ABR1 (ABA REPRESSOR1); DNA binding / transcription factor. Identical to Ethylene-responsive transcription factor ABA REPRESSOR 1 (ABR1) [Arabidopsis Thaliana] (GB:Q9FGF8); similar to DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT5G50080.1); similar to 80C09_8 [Brassica rapa subsp. pekinensis] (GB:AAZ41819.1); contains InterPro domain DNA-binding, integrase-type; (InterPro:IPR016177); contains InterPro domain Pathogenesis-related transcriptional factor and ERF, DNA-binding; (InterPro:IPR001471)
Range:
from: 25908732
to: 25911114
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.
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