Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                --------->ALFIN1                                             ------->MYC2                                             <-------MYC2                                             ------->MYC3                                             <-------MYC3                                            --------->TGA1a                             --------->At4g35610                  ------>ZmHOX2a(2)         <---------O2                 <------ZmHOX2a(2)          <---------ANAC55(2)                <---------ARR14(2)          --------->O2                <---------ARR11(3)          <---------TGA1a        <---------ARR11(3)                --------->ARR11(3)        <-----------GT1          <---------ARR14(2)     ------>MYB46(1)------>ZmHOX2a(1)    <-------TEIL------>ZmHOX2a(2)     ------>MYB83--------->GLK1(2)      --------->CCA1(2)          --------->ARR14(2)     --------->ANAC46        <---------ZAT2 --------->ANAC55(2)    ------->TEIL     --------->ANAC58        <---------At4g35610   --------->ARR11(3)     --------->ANAC58        --------->ZAT2 <---------ANAC46      <---------CCA1(2)              <--- ----->YAB1     --------->ARR14(2)     <---------ARR14(2)    <---------ARR14(2)           <---------- ------ICU4     --------->AGP1         <---------GLK1(2)     --------->GLK1(2)           <-----------GT1 -----ATHB12   <---------GLK1(1)       --------->ARR14(2)    --------->ARR14(2)  --------->At4g35610 -->WOX13(1)   --------->GLK1(1)--------->At4g35610<---------ARR11(3)            <---------At4g35610   caagaccaagccatgagagatcctgaagaacagctgcttcagattcacgtgttgatctctccaaatctgtatcttcaattctcagcacaaatttccctcc  25650000                                                                                --------->HSFB2a(2)                                                                                <---------HSFB2a(2)                                                                     <------ZmHOX2a(2) -------DOF2                                                       --------->At4g35610 -GT1                            --------->LBD16                   <---------At4g35610          -----   tttagacctgtagaaaaactccatcagttacaatccccaaaaactctcaatattgttctgctctatatcagatcacaaacctcgcgaacaagtagttgaa  25650100                                                                                                   --                                                                                                   <-                                                                                                   --                                                                                                  ---                                                                                                  <--                                                                                                  <--                                                                                                  <--                                                                                             --------                                                                                             --------                                                                                             <-------                                                                                             --------                                                                                   <-----------------                                                    <---------MYB52(2)            --------->ZAT14----                   ------>MYB46(1)             --------->ANAC58               <---------WRKY18(1)----                   ------>MYB83                --------->ANAC58      ------>MYB83 <---------ZAT14----                   -------->P                  <------NtERF2         >>>>>>>>>>>>>>>>>LFY    --------                 --------->AtMYB61           <---------ANAC46        ------>MYB46(1)<---------ANAC46        ------>ZmHOX2a(1)       --------->ZAT6------>NtERF2         --------->ANAC46<---------ANAC58       <---------ANAC58         <---------------AGL15               <---------ALFIN1<---------ANAC58       <---------ANAC58         --------------->AGL15              --------->MYB46(3)        -------- --------->ZAT14 <---------MYB111(2)  <------ZmHOX2a(1)            <---------MYB55(2) --------->ALFIN1 ----->DOF2   <---------ALFIN1 ----------------->AGL1      ----------->HVH21 --------->WRKY38(1) <---   aagagcagtccttgctccacctacatggagattaccagtaggagaaggcgcgaaacgaactctgacagacccaccattgttgactggagtggaacacgca  25650200        <---------HSFC1(2)        --------->ZAT2        <---------ZAT2        --------->HSFB2a(1)        --------->HSFC1(2)        <---------HSFB2a(1)       <-----------ARR10   --------->LBD16  --------->DEAR3(1)                                                                                < ------->AtMYB61                                                                               ------ --------ALFIN1                                                                                ------ ----->GAMYB                                                                                   <----- ------>MYB46(3)                                                                               ------ -------ABI4(2)                                                                 <------ZmHOX2a(2)   - -------MYB55(2)                                       --------->DAG2           --------->CCA1(2)  -- -------MYB52(2)                                      ---------->DOF2          <---------AGP1  ------ ->ANAC58                                     ------>NtERF2                    <---------ARR11(3)  <- ->ANAC46                                     <-----------HVH21                <-----------ARR10  <-- --ANAC55(2)                                  <---------SPL7                   --------->ARR11(3) --- ->ANAC58                                   --------->ATERF1(1)                --------->AGP1  ------ ------TaNAC69(2)      --------->At5g28300  --------->RAP2.3(1)         --------->LBD16       <------ ---->P----------->ARR10                    <------NtERF2             <---------LBD16     --------->ANAC58 ----->ANAC58         ----------->GT1      <---------RAP2.3(1)     <---------ZAT2         --------->ANAC58 ----->ANAC58   --------->HSFB2a(2)        ------>NtERF2           --------->ZAT2------>ZmHOX2a(2)<-- ->ANAC55(2)    ------>NtERF2 ---------->DOF2--------->DEAR3(1)   --------->ANAC58    --------->TOE1(3) ->ANAC55(1)   --------->DEAR3(1)         --------->ANAC46        --------->ANAC58   --------->ZAT6<- -----------OsCBT   <---------ZAT14   <---------WOX13(1)--------->GLK1(2)  ---------->DOF2--------->ANAC46   accaccgcgaagcttcgccgagaacagtaaaataaagaagattgacgccgtctgagaaaagctggagcaagctccggtaaagatctaaccctaagccacg  25650300      <---------ETT(2)    --------->LBD16   <---------ANAC46 --------->SPL7 ------NtERF2 --->ANAC58 --->bZIP60(2) ----DEAR3(1) --->ANAC58 -------->ATERF1(1) ---->NtERF2 --->O2 ----------HVH21                                                 <---------ARR14(2) -------ANAC58                                          <------ZmHOX2a(1) ------>DEAR3(1)                                       ----------->GT1 <---------WOX13(1)          -- --->ANAC46--------->ANAC58                          <---------At4g35610<---------AHL20(2)      ----- ---LBD16  --------->ANAC58                  --------->ARR11(3)  --------->ARR14(2)   ---------->DOF2 -------ANAC58  --------->ANAC58             <---------ARR11(3) <------ZmHOX2a(1)--------->ICU4 ----- --------SPL7   --------->ANAC58           <---------TOE2(3)---------->DOF2    ---------->DOF2-------   gcgtcccgtagacaaggctcgccattttcgttttcttcgaaagttgagatttttcagaggataaaaggatttgattaatcggaaagatgaaagtcgcaaa  25650400    ----------->RAV1(1)   <----------ID1                              <-----------GT1 --------->ANAC58                      --------->YAB1                                          ------ --------->ANAC58                    <------------CBF             <-----------GT1         ----------- -------->DOF2                     *TSS----------->GT1       --------->AHL20(1)       <------------CBF ---->ANAC58                       <---------YAB1            <---------AHL20(2)    --------->LBD16 ---->ANAC58                 <------------MYB.PH3(1)         <---------AHL20(1)    ------------>CBF --->DOF2        ---------->DOF2   <---------AHL20(2) --------->LBD16        <-----------GT1 <-------   gcaaagcaacaaattcgattaaagcctcataactgttttaattgtaaaattacatccccatattatattttcaacctatttactccccaattgacaattg  25650500                               --------->ZAT18                             ------->MYC2                             ------->MYC3                             <-------MYC2                             ------->MYC4                             <-------MYC4                             ------->PIF5                             <-------MYC3                             <-------PIF5                            <---------ANAC46                            --------->TGA1a                            <---------TGA1a                            <---------ANAC55(2)                            <---------O2                        ----------------->PIF3(1)                       --------->ANAC58                       --------->ANAC58          <---------O2             ----------->GT1                     =================bZIP_DOF   <---------bZIP60(1)      --------->ANAC58                     ---------->DOF2             --------->O2             --------->ANAC58                    <------ZmHOX2a(1)            --------->bZIP60(1)    ---------->DOF2            <---------------AGL15          <------ZmHOX2a(1)         <---------HSFB2a(2)           <-----------------AG--------->WRKY38(1)                   --------->HSFB2a(2) --->YAB1  =========================================MADS_MADS<---------SPL7              ---------->DOF2 ->CBF     <-----------------AGL1 <-----------------AGL3    <---------ANAC58           --------->HSFB2a(2) -----CBF <-----------GT1   --------->O2 <---------TOE2(3)  <---------ANAC58           <---------HSFB2a(2)   taatgctaaaattcacttattaggaaagacacgtggactatttgaggaacgacgtcgtcttgtcgtctggtctggaaagtaacattgttctaaaagaccc  25650600                                                                                             --------                                                                                            <-------TEIL                                            --------->ANAC58                           ------>NtERF2                                   <---------YAB1                                     --------->DEAR3(1)                            --------->TOE2(1)        ---------->DOF2          --------->LBD16<-------                            --------->TOE1(1)  ---------->DOF2           <---------GLK1(1) <---------MYB52(1)   --------->TOE2(3)       ------>ZmHOX2a(1)--------->ANAC58 <-----------RAV1(1) --------->MYB52(1)   cataacctttgttaatttctacttacatcctcgtactatgtttgcgaagcaaagtcaaagtaattgtggcattgtatttccccaaacgacgacgttcgtt  25650700                  ----------->HVH21        <---------YAB1      --------->AHL20(2)        ------>ZmHOX2a(1)   <---------AHL20(2)       --------->TOE2(3)   --------->YAB1                                                    <-------   --------->YAB1<-----------HVH21              <---------At4g35610               --------->DAG2  <-------TEIL----------->RAV1(2)        --------->ATHB12                --------->ZAT6   --------->ARR11(3) ->MYB52(2)   <---------ANAC58          <---------YAB1                 <-----------GT1    <---------ARR11(3) --MYB46(3)   <---------ANAC58       --------->ICU4         --------->GLK1(2)    ---------->DOF2  ---   cacattcatccttatagcctgtgactgaattttaatggcattatcattgaagctaagctaagaatccatggtattacactagttaaagcgaaggtctttg  25650800                                                                          <---------ALFIN1                     --------->ARR11(3)    --------->At4g35610         <---------TCP16(1)                     <---------ARR11(3)    <---------At4g35610         <---------TCP20             <---------YAB1         <---------WRKY38(1)           <---------ZAT2             --------->ICU4       --------->ANAC46                --------->At4g35610           --------->YAB1      --------->ZAT14                    --------->ZAT2     <---------DEAR3(2)   <-------TEIL <---------YAB1 <---------ZAT14 <---------HSFB2a(2)<---------At4g35610----------->GT1 ---DOF2  --------->ICU4   --------->ZAT6  <-------GAMYB       ---------->DOF2    ------------>AtMYB77 -------->RAV1(1)    --------->GLK1(2)  ------->GAMYB--------->YAB1  <---------ATERF1(1)       <-----   ccacatacataaatgatgatgaaaatctaagactacagacaacgcagttgcagaaacataacatagaaagctggctccactactggacggtttcaagtta  25650900  Previous    Next  AGI:  At5g64050.1    Description:  ATERS/ERS/OVA3 (OVULE ABORTION 3); glutamate-tRNA ligase. Identical to Glutamyl-tRNA synthetase [Arabidopsis Thaliana] (GB:Q9FEA2;GB:Q940P6); similar to glutamate-tRNA ligase, putative / glutamyl-tRNA synthetase, putatuve / GluRS, putative [Arabidopsis thaliana] (TAIR:AT5G26710.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN72214.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47549.1); similar to glutamyl-tRNA synthetase [Nicotiana benthamiana] (GB:AAY18610.1); contains InterPro domain Aminoacyl-tRNA synthetase, class I, conserved site; (InterPro:IPR001412); contains InterPro domain Glutamyl/glutaminyl-tRNA synth Range:  from: 25647081    to: 25650435    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g64060.1    Description:  ANAC103 (Arabidopsis NAC domain containing protein 103); transcription factor. similar to ANAC082 (Arabidopsis NAC domain containing protein 82) [Arabidopsis thaliana] (TAIR:AT5G09330.2); similar to ANAC082 (Arabidopsis NAC domain containing protein 82) [Arabidopsis thaliana] (TAIR:AT5G09330.3); similar to ANAC082 (Arabidopsis NAC domain containing protein 82), transcription factor [Arabidopsis thaliana] (TAIR:AT5G09330.1); similar to nam-like protein 2 [Petunia x hybrida] (GB:AAM34765.1); contains InterPro domain No apical meristem (NAM) protein; (InterPro:IPR003441) Range:  from: 25650762    to: 25653007    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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