Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                     <-------MYC3                                       ----------->GT1                  <---------HSFC1(2)                                     <---------ZAT18                    --------->HSFB2a(1)          <----------DOF2            --------->ZAT18                    <---------HSFB2a(1)         <---------DAG2              --------->ZAT14                    --------->HSFC1(2)     --------->ANAC58           <---------ZAT14                       <---------ARR14(2)     --------->ANAC58       <---------HSFB2a(2)    --------->ANAC58   --------->ARR14(2)   ---------->DOF2          --------->HSFB2a(2)    --------->ANAC58--------->ALFIN1------->MYC2 -->ARR11(3)        <---------YAB1   <---------ZAT14       --------->ALFIN1        <-------MYC2 ---ARR11(3)   <---------AtLEC2 --------->ZAT14  --------->ZAT6  --------->ALFIN1  ------->MYC3     -   tacaaaaacgcccttttgcattgtcatcgtccagaatagtggagtaatataacacgaacaagtggaagtgtggaaccttcttacacatgcttctgtctct  25516200                                     ================================================================                                     <---------------AGL15                                     --------------->AGL15                                  <---------ARR11(3)                        <---------ICU4                                                         <-----         --------->ANAC46 --------->ICU4                                                    <--------         --------->ANAC58 <---------YAB1                                                 <---------ICU4         --------->ANAC58--------->TOE2(3)                                             <----------DOF2     --------->YAB1     --------->YAB1             <---------MYB46(3)             <---------ICU4 ---------->DOF2       <---------ATHB12        --------->ATHB12                  <---------ATHB12  <- ----->ZmHOX2a(1)<-----------GT1  --------->ARR11(3)                         --------->AHL20(2)<-----   tcctaaagcataagccattttcccaaacattattaagttcttaattaagtcattggtttgttttctattactaattcgtttaaatcattctttattactt  25516300                                                                                                -----                                  <---------YAB1                                                -----                                 --------->AHL20(2)                                             -----                             ----------->GT1  ------>ZmHOX2a(1)                             ------>ZmHOX2a(2)   <---------AHL20(2)   ------>ZmHOX2a(1) --------->ARR11(3)                               <------ZmHOX2a(2) ======================================MADS_MADS         --------->WOX13(1)               --------->ARR11(3) ----DAG2               <----------DOF2   <---------ARR11(3)                              <---------ARR11(3) ---GT1                --------------->AGL15  <----------DOF2                            --------->GLK1(1) --------YAB1       <---------ARR11(3)   --------->GLK1(1)  --------->YAB1               <---------GLK1(1) -----DOF2         <---------CCA1(2)     <---------GLK1(1) <---------ATHB12         ---------->DOF2   tatgtttattttgggccatctatatccttttttgttaaaattgatatcctttttagccccaatcacatcccaagttacacacttgcaaaagagatctcac  25516400         --------->ANAC58                                                            ---------->DOF2         --------->ANAC58                                                    <----------DOF2    ---------->DOF2                                  --------->ARR11(3) --------->GLK1(2) ---->ANAC46                                         <---------ARR11(3)<---------GLK1(2) ---->ANAC58          ----------->GT1            ---------->DOF2       <---------ARR14(2)      <----- ---->ANAC58 ---------->DOF2              <---------TOE2(3)            --------->ARR14(2)      ------   ccaaaataaagaagcaaaagaagatggaaaaatacacctccattaagaaatcaaagatgtttcaacttagtgggattctctttctctcaaagcagcattt  25516500                                                       ------>ZmHOX2a(1)                                                   <---------PCF2                                           <----------DOF2                                          <---------DAG2                                          --------------->AGL15                                         ============================================================                                         <-----------------AGL3                                    <-                                        --------->ARR11(3)                                        <--                                        <---------ARR11(3)                                       <---                                       <-----------GT1 <----------DOF2                          -----           <-----------GT1      <---------YAB1   <---------MYB46(3)                            <-----       <----------DOF2    --------->AHL20(2)  <-----------RAV1(1)          <----------DOF2 <--------- ----ARR14(2)        <---------ZAT6    --------->RVE1(1)     --------->ANAC58      <---------At4g35610 --->ARR14(2)        ----------->GT1   --------->CCA1(1)     --------->ANAC58  <----------DOF2-------   cttcatcttctttttacatcatagagataaaaatatgaaaaataccttttgtgggtcctttataagcactaacttctctttctttagatgattttacatt  25516600        --------->ATHB12     <----------DOF2     <---------------AGL15     --------------->AGL15    <---------ANAC46    <---------ANAC58    <-----------------AGL3    <---------ANAC58          --------->ARR14(2)    <-----------------AGL2    <---------ARR14(2) =====================MADS_MADS ----------RAV1(1)    <---------YAB1                                       --------->REM1(2) -------YAB1        <--------HAHB4                                        <---------MYB52(1) ---------CBF       <---------ICU4                                      <---------ANAC46 ---->ATHB51       --------->ICU4                   ------->GAMYB       <---------ANAC58      ------>ZmHOX2a(1) ----YAB1<------------CBF<-----------GT1 <-----------GT1      <---------ANAC58           --------->At4g35610 --GT1 <---------YAB1--------->AHL20(2) *TSS      -------->P  <---------ANAC58           <---------At4g35610 -->TOE2(3)        <---------YAB1 ------>ZmHOX2a(1)--------->ANAC46     <---------ANAC58 <---------ZAT2   attgttgcttttattggcttcattattatacaaatcctccatttctctcttcaaccccatgttttcgttctcttccgtttagagtgttttcagctcctct  25516700                                                                              <---------ANAC46                                                                              <---------ANAC58                                                                         <------MYB83                                                                         <------MYB46(1)                                                                        --------->MYB59                                                                        <---------TOE2(3)                                                <---------ARR14(2)  <---------AHL20(2)                      <----------DOF2           --------->ARR14(2) --------->AHL20(2)              <-               <---------AHL20(2)              <---------CCA1(2)   <---------AHL20(2)    ---------->ID1          <---------MYB52(1)          <----------DOF2             <---------AHL20(2)   <-----------RAV1(1)  <---------ZAT18---------->DOF2      --------->TOE2(3)>>>>>>>>>>>>>>>>>LFY   <---------ANAC58<------   atggctcactcgggtatttaaaagctttgttttacttatactttaatgcctatctttctccattgtatattaattaggtttcttggtttttgttgtttat  25516800                                                       <---------TOE2(3)                                               <-------TEIL                                            <------MYB83                                            <------MYB46(1)       <---------DAG2                      --------------->AtSPL8                       ---------->DOF2       <----------DOF2                     --------->MYB59                           --------->ANAC58  <---------MYB59                     <---------ARR11(3)                             --------->ANAC58 --------->ANAC55(2)                  --------->AHL20(1)                           ---------->DOF2 ----------GT1             <---------ANAC46<---------------AtSPL8                <---------YAB1 ---AHL20(2)      <----------DOF2     <---------AHL20(1)  ----------->HVH21    --------->YAB1   -----   tttacataactttattgtttcttttagtttcgagttacaaaatatttggtacatatttaggtgaaacggagaggtttttgatcatcaaagcaaagagtca  25516900                                                                                                    -                                                                                                   --                                                                                                  <--                  ---------->ID1                                                                  ---          --------->AHL20(2)                                                        <------ZmHOX2a(1)          <---------AHL20(2)                                                        =================         <---------YAB1                              <---------TOE2(3)      <---------YAB1<---------TOE2(3)       --------->YAB1                            --------->TOE2(3)          ----------->HVH21    <--- ----->DOF2     <-----------RAV1(1)    <----------DOF2                  --------->At4g35610   <------   aagacagaattataaattttgttgttcttgatacttataagctttcatttttcttaatgttttcggttcaaatgagctctgatagaggagttatggattg  25517000                            ---------->DOF2                                                   <------ ---------->HVH21          --------->YAB1                                                    <------- ---->ZmHOX2a(2)          <---------ATHB12                                            <---------ANAC58 -------At4g35610       --------->WOX13(1)                                            <---------ANAC58 ------>At4g35610    --------->ANAC58              <---------ICU4            <----------DOF2 <------- =====HOX2a_HOX2a    --------->ANAC58             --------->ICU4           <------------------------ANAC81 ------AGP1        ---------->DOF2   --------->MYB52(2)                 <----------DOF2<----------DOF2 ---WOX13(1) --------->ANAC46      <---------MYB52(1)       ----------->RAV1(1)   <----------DOF2   atctgacaatgtttcacatcagaaagcaatcaaagctgttagtttttaagacataattagacccacaaatcggtcttttcttttctttgctttcttatgt  25517100  Previous    Next  AGI:  At5g63710.1    Description:  leucine-rich repeat transmembrane protein kinase, putative. similar to leucine-rich repeat family protein / protein kinase family protein [Arabidopsis thaliana] (TAIR:AT5G10290.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71633.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain Leucine-rich repeat, N-terminal (InterPro:IPR013210); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611) Range:  from: 25516640    to: 25520024    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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