Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                             --------->LBD16                                                          --------->LBD16                                                         <-----------------AGL1                                                         --------->HSFB2a(2)                                                      ------>ZmHOX2a(1)                                                    --------->HSFB2a(1)  ---------->DOF2                                   ------>ZmHOX2a(2) -------->ANAC46                                    --------->HSFC1(2) ------>ANAC58                                      <---------HSFB2a(1) ------>ANAC58                                     <------ZmHOX2a(2) ----->SPL7                                       <---------ARR14(2) ->MYB83                                          --------->ARR14(2) ->MYB46(1)                                   <--------P <---------HSFB2a(2) --->MYB55(1)                               --------->ATHB12 ----SPL7                      --------->ANAC58 <------MYB46(1)                     --------->ATHB12 ---MYB59                      --------->ANAC58 <------MYB83         --------->GLK1(1)     <---------MYB46(3) ->ANAC46       <---------At4g35610         <---------MYB46(3)       <---------GLK1(1)<---------YAB1 --GT1          --------->At4g35610 --------->AtLEC2<---------HSFC1(2)   --------->HSFB2a(2)   acgcgaaagagaagtttgagctgtatgctagtcatgccatggacaatggttggatccttcccgagtttgggatttctgcaactcagtgattagtggttct  25365800                    <---------ANAC58                                               ----------->GT1                    <---------ANAC58                                              --------->ARR11(3)        <---------ANAC58                                                     --------->TOE1(2)        <---------ANAC58           ------>ZmHOX2a(1)                        --------->YAB1    <------        <---------ANAC46<---------YAB1                          <---------MYB52(1)<---------ARR11(3)   cttatcagtttcttgtgtttgtgcttacgatactttcctcactatctacatatatgtatggattcagttagtagataaacatgagatgtttatatgttca  25365900                                         <----------DOF2                                      <---------ARR11(3)                  <---------ANAC46    --------->ARR11(3)              <-------GAMYB          <---------CCA1(2)             --------->MYB111(2)     --------->GLK1(1)             --------->MYB55(2)      <---------GLK1(1)                           --------->YAB1     -             <---------MYB46(3)   <---------ZAT6                <---------WOX13(1)      ----------->GT1 -TEIL      <--------P      <---------------AtSPL3           <---------YAB1     ----------->GT1  <---   tgtgtttctgtctggttgttgtgttttgtctttgtactgatatcttttagtgtgttctaatttctgatggatttttgttacattgaaaataagttattag  25366000                                                                                                    <                                                                                                    <                                                                                       ----------->GT1                                                    <---------YAB1               <---------YAB1     -                                                    --------------->AGL15      --------->YAB1       -                                                    <---------------AGL15      --------->AHL20(2)   <                                              --------->AHL20(2)           --------->AHL20(2)       -                                              <---------AHL20(2)           <---------AHL20(2)    ----                                             <---------AHL20(2)            --------->AHL20(1)  ------                       <---------YAB1   --------->YAB1                    <---------AHL20(2)  -------          <---------ZAT6               <---------YAB1               ----------->GT1   ----------->GT1 ---------->GT1      <-----------GT1<---------AHL20(2)     ----------->GT1--------->AHL20(2) -------- ------AtLEC2     <---------ICU4<---------RVE1(1) --------->YAB1<---------ARR14(2)  ---------->DOF2--   catggttaatttgtgttaacttattactcttgtgatattttatgaaaattatttataaatatagaaaatatggtaattaaattataaaaagataaataaa  25366100              <------MYB46(1)              <---------DEAR3(2)              <------MYB83             <---------MYB46(3)             <---------DEAR3(1)             --------->MYB46(2)             <---------DEAR4(1)            <---------MYB55(1)            <---------ORA47(1)          <------MYB46(1)          <------MYB83                  --------->LBD16 <---------AHL20(2)                    --------->ANAC55(2) ---------AHL20(1)                     <---------HSFB2a(2) ---------AHL20(2)                     --------->HSFB2a(2) -------->AHL20(2)                  --------->ARR14(2) -------->ARR11(3)         <---------YAB1 ---------ARR11(3)       -------->HAHB4<---------ANAC55(2) -------->AHL20(1)       --------->YAB1<---------LBD16 ----->AHL20(2)          <---------ICU4<---------ANAC46 --->AHL20(2)--------->MYB55(2)   --------->LBD16                 --------->AtMYB61           ------>ZmHOX2a(1) -->YAB1 --------->MYB59--------->ICU4<---------LBD16            ------------>CBF      <----------DOF2 ->AHL20(2)<-----------HVH21    <---------LBD16            <------ZmHOX2a(1)           <---------DAG2 ------->AHL20(2)    --------->ICU4 <---------ARR14(2) ---------->DOF2           --------->MYB52(1)<-   aatatatttgttcggtcggtgagataattatgactccggttccgggatagagcaaacaaaaggatagaccaatactcgttgccaaacagctttatcctcg  25366200                                                 <---------ZAT18                                                 <---------SPL7                                                 --------->ZAT14                                                <---------ANAC58                                              --------->LBD16                                            --------->SPL7                           ------>ZmHOX2a(2)                                            <---------LBD16               <---------LBD16------>NtERF2                                          <---------SPL7                <---------SPL7 --------->RAP2.3(1)                                      <-----------GT1                  --------->DEAR3(1)<-----------HVH21                                     *TSS <-----------HVH21   <---------YAB1        <------ZmHOX2a(2)                                     <---------ZAT14      ----------->RAV1(1)      <---------ARR14(2)                                    <---------DAG2      --------->At4g35610 --------->LBD16         -                             <---------At4g35610<---------ANAC46      --------->MYB46(3)--------->DEAR3(1)            <---------YAB1   --------->At4g35610<---------ANAC58      --------->DEAR3(2)--------->RAP2.3(3)   <---------YAB1         <---------At4g35610<---------DEAR3(1)      ------->TEIL  --------->ARR14(2) ----------TBP         <<<<<<<<<TBF1<----------DOF2     <---------At4g35610--------->LBD16<------NtERF2   tttttatatttgttttgattctttcttcttctgctcaactttactgtccggcgtactcagcaccatcaatggaccgcccggagacgatcgccgtcaaatg  25366300                                                                                     <---------ICU4                                                                                     ------>ZmHOX2a(2)                     ------>ZmHOX2a(1)                                               ================            --------->WRKY12                                                       --------->ARR11(3)            --------->WRKY45                       ----------->HVH21    ------>ZmHOX2a(1)           <---------MYB52(1)                      --------->WRKY12   ----------->RAV1(2)           --------->DOF5.7(2)       <---------ANAC58  --------->TOE1(3)--------->LBD16          <-------GAMYB <---------HSFB2a(2)      <---------At4g35610 =======================HOX2a_HOX2a      <---------WRKY18(1)            <---------ANAC58  --------->TOE2(3)====================HOX2a_HOX2a     ----------->HVH21  --------->HSFB2a(2) <---------ZAT6   <-----------GT1       <---------ARR11(3) ------>TEIL--------->WRKY38(1)  ---------->DOF2 --------->At4g35610 ------>ZmHOX2a(1)   cgaacccatgaccgttgactctccttctcgacctctaaagcttgtagttttagctgaccttaatttcaatcctcctgagactgatgatcttgactcatcc  25366400                                                  <---------ANAC58                      <----------DOF2                       --------->ZAT6     --------->ANAC55(2)                          <---------ANAC58                      <---------ATHB12    <---------ANAC55(2)                          <---------ANAC58                 ------>ZmHOX2a(1)        --------->ANAC46   <---------At4g35610    <---------MYB52(1)              ------>ZmHOX2a(1)<-------TEIL       <---------ANAC46            <----------DOF2        <---------ALFIN1   --------------->AtSPL8 <---------ANAC58  <-----------GT1<-------GAMYB   <- ====================HOX2a_HOX2a         <-------TEIL        --------->At4g35610  <-----------RAV1(1)   attccaatccctactcctcctcccatcactaggtacttctacatacgtagttgtgtgtgtttcagctaattaacctatttctttctgttgctttcgacta  25366500                                                                              <---------ARR11(3)                                                                              <---------AHL20(1)                                                                              --------->AHL20(1)                                                                              --------->ARR11(3)                                                                              <---------AHL20(2)                                                                              --------->AHL20(2)                         ------>ZmHOX2a(1)                              <--------P                <---------AHL20(2)                                  --------->LBD16              <---------CCA1(1)                                    <---------ANAC58             --------->ARR11(3)                                    --------->ANAC55(2)             <---------ARR11(3)                                    <---------ANAC46           ----------->ARR10                                       <---------ANAC55(2)       <---------At4g35610                                         <---------ANAC58                --       --------->At4g35610         --------->ANAC58               <---------LBD16                  --   <----------DOF2   <-----------GT1        <---------YAB1       <-----------GT1                  --- ---------DOF2<---------RVE1(1)    --------->ANAC58  ----------->HVH21 <-------GAMYB             <---   actttcttttgctgagatttttttttcctctgttcggaagaaacatatgtttgaagtgacatttttgttacggggttgaatatattgatgtcttcttatg  25366600    --------->GLK1(2)         <----------DOF2    <---------ARR11(3)     <---------ARR11(3) ---->NtERF2               --------->ARR11(3)                               <---------ZAT6      <---- ------->LBD16            <---------GLK1(1)                        --------->YAB1              ------ ------>RAP2.6(2)         --------->GLK1(1)                       <---------YAB1             <------- ------LBD16              <---------CCA1(2)                <---------AHL20(2)          <-----------GT1   ccgcaaaatctaaaaatcgagactttggatatctttcagcaagagtctaaaaatggggaattttttttttgataagtagagtttgattcttactgctttg  25366700  Previous    Next  AGI:  At5g63190.1    Description:  MA3 domain-containing protein. similar to MA3 domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G24800.2); similar to MA3 domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G24800.1); similar to MA3 domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G48390.1); similar to H0525D09.11 [Oryza sativa (indica cultivar-group)] (GB:CAH66971.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64189.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN76898.1); contains InterPro domain Initiation factor eIF-4 gamma, MA3 (InterPro:IPR003891) Range:  from: 25362768    to: 25366022    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g63200.1    Description:  tetratricopeptide repeat (TPR)-containing protein. similar to SEC (SECRET AGENT), transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT3G04240.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64187.1); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990); contains InterPro domain Tetratricopeptide TPR-1 (InterPro:IPR001440); contains InterPro domain Tetratricopeptide TPR2 (InterPro:IPR013105); contains InterPro domain Tetratricopeptide region (InterPro:IPR013026) Range:  from: 25366237    to: 25370265    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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