Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                      -------->P <---------YAB1                --------->YAB1      ------->TEIL          --------->ZAT6        <---------ARR11(3)       ----------->HVH21        <---------ARR14(2)     --------->ANAC46           --------->ARR14(2)            --------->ANAC58     <---------O2               --------->ARR11(3)            --------->ANAC46     --------->O2   <---------AHL20(2)       --------->YAB1   --------->ANAC58  ---------->CDC5   <-----------GT1<-----------GT1       --------->ANAC55(2)                        < ------RAV1(1)  <--------HAHB4  <-----------ARR10        <---------ANAC55(2)               <---------AHL20(2) --->ALFIN1    <---------YAB1  --------->GLK1(1)        <-------TEIL                   <---------ICU4   tggctcaacgtgacactattattaacttgacgaatatctaccttctcttataattcgattcgtaacgccatacttgtatgtaatacacattatttcattt  25254000                                                                 ----------->GT1                                                                 <------MYB83                                                                 <------MYB46(1)                                                              --------->ARR14(1)                   --                                                              --------->CCA1(2)               <------                                                             --------->ARR11(1)              <-------                                                             --------->ARR11(3)             ---------                                                             --------->ARR14(2)             <--------                                                             <---------ARR11(3)            <---------ANAC58                                                             <---------ARR14(2)            <---------ANAC58                                                           ----------->ARR10          <---------ARR14(2) -----------GT1 ----------->GT1                      --------->MYB46(3)               --------->ARR14(2)   tcttacaatccaatacaagtgtaataaacacttaaaaaaaaaaaaacaagattgaaccaccaagatttggttaacaaattccaatgcaaatttgctcgtt  25254100     <---------AHL20(2)     --------->AHL20(2)    --------->ICU4 --------->GT1 -GAMYB                         ---------->DOF2                  --------->DEAR3(1) --MYB46(3)                 --------->DAG2          <---------ANAC55(2)     <---------CCA1(2) ------>AGL15              ---------->DOF2       <------ZmHOX2a(2)    <----------DOF2 -------AGL15       --------->GLK1(2)           --------->ARR11(3)  <----------DOF2        >>>>>>>>>>MYB80   ggagtaataaatgaactacaagaatttggaaaaggaaagcttggacgatggatcatgtgagtcatcaccgctctttctctatcttcaagttcaaaccaaa  25254200         ------>MYB46(1)         ------>MYB83           <-----------------AGL1       <---------MYB111(1)     <---------CCA1(2)                          ---------->DOF2  --------->ANAC58     ------>NtERF2         <---------ANAC58                         ----------->GT1        --------->ANAC58    --------->RAP2.6(2)    <---------ANAC58                        --------->DAG2        ---------->DOF2 --------->ANAC58          <---------ANAC46     ----------->GT1   ---------->DOF2 ----------->GT1---- --------->ANAC58  <-----------GT1      ----------->GT1      ----------->GT1------------------------>ANAC81 --------->ANAC46<---------ATHB12<---------------AGL15    --------->MYB52(1)<---------------AtSPL8   aacaagccaccaaataccaataaacaatttcgtttatctaattggaaatattgaaaaaacaaacagaaaaaagtaaaaaaggaacagaaaaaaaagccat  25254300                 -------->P                 ------>MYB83          ------->GAMYB         <---------MYB52(2)                                  ------>ZmHOX2a(1)         --------->MYB46(3)                                 *TSS       ----------->RAV1(1)                      <-----------GT1<----------DOF2      <----------ID1                    ----------->GT1<-----------GT1                 <-----------GT1 ----->AHL20(2)  ------>MYB46(1)  ---------->DOF2   <----------DOF2  --------->ANAC55(2)   aaatttatgcaacaaaccctaccttcttctatgctctaaagagggtttatttatcttttactcctctttttaagtaatctcacttcatttatctctctct  25254400                                                                                                    <                                                                                                    <                                                                                                   <-                                                                                                   <-                                                                                                  <--                                                                                                 <---                    <----------DOF2                                                             <----               <---------ANAC58  <----------DOF2                                                <----               <---------ANAC58 <---------ANAC58               <----------DOF2  <-------TEIL---------          <----------DOF2       <---------ANAC58         <---------ICU4    ---------->DOF2--------->ALFIN1    xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)               <------ZmHOX2a(2)  <----------DOF2 --------->ALFIN1   ctctctctatttcttttgcttccttttggtatttgctttgtatgtttgttttgagatcaaaatggcttcaagtgcttcaaagttcatcaagtgtgtgact  25254500                                                   --------->AHL20(2)             <---------MYB52(1)                    <---------AHL20(1)           <---------MYB46(3)                      <---------AHL20(2)     <---------AtMYB61                             --------->AHL20(1) ------MYB46(1)----------->GT1                    <---------ATHB12 ------MYB83<-------GAMYB                    --------->ANAC58 --------MYB46(3)                            --------->ANAC46 --------AtMYB61                             --------->ANAC58            <----------DOF2 -------MYB52(1)                         --------->REM1(1)          <---------ARR11(3) ----GAMYB <-----------RAV1(1)       --------->At4g35610            --------->ARR11(3)   <----------DOF2 -----MYB46(3) <------MYB83       <---------At4g35610          --------->At5g28300<---------ARR11(3) -------RAV1(1)<------MYB46(1)    ----------->RAV1(2)      <---------ALFIN1       --------->ARR11(3) -->HVH21<---------At4g35610      --------->At4g35610    >>>>>>>>>>>>>>>>>LFY ---------->DOF2   gttggtgatggtgctgttggtaaaacctgtatgctcatctgctacaccagcaataaattccccactgtaagttctctttaaaaagacctctctttctctc  25254600                                                                         --------->GLK1(2)                    ----------->RAV1(2)                                  <---------ARR14(2)                    --------->At4g35610                       <---------ATHB12                     <-             <---------GLK1(2)         --------->At4g35610--------->AHL20(2)                   <-----            <------ZmHOX2a(1)  --------->YAB1    <-----------GT1         --------->ARR14(2)   <------     <---------YAB1 <---------At4g35610<---------At4g35610<---------AHL20(2)                  -------   ttgaattttgatcaggaatctcatctggatttatcagatttagctcaaattttacaaaattttaatcaatttcagtatctgggtctactaaatttcagct  25254700                                                                                   <---------------AGL15                                                                                   --------------->AGL15                                                                                  <-----------------AGL3                                                             <------ZmHOX2a(1)    <-----------------AGL2                                                           <---------TOE1(2)      ----------------->AGL3                                                          ==============================HOX2a_HOX2a                                                          <---------HSFB2a(2)     <-------TEIL                                                          --------->HSFB2a(2)    <------ZmHOX2a(2)                                                          ------>ZmHOX2a(1)     --------->AGP1 ------           <---------TOE2(3)                             --------->TOE2(2)      <---------ARR14(2)         ---------->DOF2                           <---------DAG2               --------->ARR14(2)     ----------------->AGL1                        <----------DOF2              --------->ARR11(3) --------YAB1                                 --------->At4g35610               <---------ARR11(3)<-- ----GLK1(2)          --------->GLK1(2)       <---------At4g35610    <---------AtLEC2         ------- ---At4g35610        <---------GLK1(2)       --------->MYB59 ===========================HOX2a_HOX2a -->At4g35610  <-------TEIL            ---------->DOF2   --------->TOE1(2)--------->CCA1(2)   <------   tcttattgccataaaggttcttagaatctatctgggtatgtcaaagttagctcctttttcctaggaactgtgcatgatataagatccatttttggagatt  25254800                                  ----------->RAV1(2)                                  <---------ZAT2                                  --------->At4g35610                                  <---------At4g35610                                  --------->ZAT2                                 --------->ARR14(2)                                 <---------ARR14(2)                                 ------->TEIL                              <---------ANAC58           <----------DOF2    <---------ANAC58           <---------DAG2  <---------DEAR3(1)        <-----------GT1    --------->ALFIN1   <---------AHL20(2)    <-----------RAV1(1)                                                        - --->GLK1(2)             =====================RAV      <---------ANAC46                           <-- -------YAB1             --------->ALFIN1            <---------ANAC46          <----------DOF2   ---- -->ARR11(3)      <---------ICU4 --------->GLK1(2)<----------DOF2   <----------DOF2              ---- ---ARR11(3)   --------->YAB1 <---------ANAC46  <---------At4g35610 <---------DAG2        <----------   ttgattttttttacttttcataagtatgtgtggcgcatctgggtttttgcagcttttgtgtatagtccagctttatgttatcttttttcatttaacatcc  25254900  Previous    Next  AGI:  At5g62880.1    Description:  ARAC10/ATRAC10/ATROP11 (RHO-RELATED PROTEIN FROM PLANTS 11); GTP binding. Identical to Rac-like GTP-binding protein ARAC10 (ARAC10) [Arabidopsis Thaliana] (GB:O82481); similar to ARAC8/ATROP10/ROP10 (rho-related protein from plants 10), GTP binding / GTPase [Arabidopsis thaliana] (TAIR:AT3G48040.1); similar to putative rac protein [Nicotiana tabacum] (GB:CAD42725.1); contains InterPro domain Ras GTPase; (InterPro:IPR001806); contains InterPro domain Ras (InterPro:IPR013753); contains InterPro domain Small GTP-binding protein; (InterPro:IPR005225); contains InterPro domain Ras small GTPase, Rab type; (InterPro:IPR003579); contains InterPro do Range:  from: 25254360    to: 25256400    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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