Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                        --------->ANAC46                           ----------->RAV1(2)                           <---------ZAT2                           --------->ZAT2                           <---------TGA1a                           ==========================bZIP_DOF                           --------->TGA1a                           <---------O2                          ------>MYB83--------->ANAC58                          -------->P  --------->ANAC58                    --------->ANAC58             ------>ZmHOX2a(1)      <---------ALFIN1                    ---------->DOF2          ------>ZmHOX2a(1)--------->O2                --------->AHL20(2) --------->ANAC58         <---------ALFIN1 ------>MYB46(1)      ----------->GT1        <---------MYB59             <XX       ------>ZmHOX2a(1) <---------ALFIN1 ---------->DOF2         --------->ANAC46    --------->AHL20(2)   ccttgattcctcctcctcaaactaaacccacctgtgaaacactccaaagatgtaaaatttaaaactctacgacctaaagcaaaccaaaaaaaatcgaatt  25234300                                                                                                   --                                                                                                  <--                                                                                               <-----                                                                                     >>>>>>>>>>WRKY6                                                                                     >>>>>>>>>>WRKY11                                                                                     >>>>>>>>>>WRKY38                                                                                     >>>>>>>>>>WRKY26                                                                                     >>>>>>>>>>WRKY43                     ----------->GT1                                                 <---------WRKY18(1)                --------------->AGL15                                               ----------->HVH21                <---------------AGL15                             <----------DOF2   --------->WRKY45          <---------GLK1(2)                           ---------->DOF2               --------->WRKY38(1)     --------->MYB52(1)                            <---------TOE2(3)       ---------->DOF2   -------- XXXXXXXXXXXXXXXXXXMIR870                       <---------MYB52(2)--------->TOE2(3) --------->WRKY12   gaagaaataacagattacctagatagagaaattcacaagagcctaagacaactaatgaaagtttgcaactttaatcgaaaagagagttgaccaaggagga  25234400                                                                                      ----------->RAV1(2)                        --------->TOE2(2)                      --------->ANAC58       --------->ZAT2                        --------->TOE1(2)                      --------->ANAC46       <---------ZAT2 -------->DOF2         ----------->RAV1(2)               --------->GLK1(1)            --------->At4g35610 ----ZmHOX2a(1)  >>>>>>>>>TBF1                    <---------LBD16---------->DOF2      <---------At4g35610 -ZmHOX2a(1)  >>>>>>>>>TBF1                      ----------->RAV1(2)        <----------DOF2 ->ALFIN1 <------ZmHOX2a(1)                     ------->TEIL   --------->ANAC58     <-----------RAV1(2)   ggaaagaagagaggaagaagaagaaacctgagagtttagggattggattgaacctggaggtatccaagaaagaaatagctttggattcagctggagatag  25234500                                                    --------->ZAT14                                                    <---------ZAT18                                                    --------->ZAT18                                                   --------->DEAR3(1)                                                  --------------->AtSPL3                                                <---------ARR14(2)                                                --------->ARR14(2)                      <----------DOF2       --------->LBD16                  <---------GLK1(2)        --------->HSFB2a(2)              <---------YAB1               <---------HSFB2a(2)              --------->At4g35610       <-----------GT1            <---------ICU4           <---------AHL20(1)            --------->YAB1           --------->ARR11(3)                                           <--           <---------YAB1            --------->AHL20(1)                <---------YAB1            ----           --------->ICU4            <---------ARR11(3)          <---------YAB1         --------->At4g35610   tgagtttaatgtcatcatcagagtcttttaaaaatcgaatattttccagagaaccgcactactactcttgattatcagagaagacgaatcagataaacag  25234600                                                      --------->ARR11(3)                                                 ----------->RAV1(1)                                                 ------>MYB83                                                 ------>MYB46(1)                                                 --------->MYB52(1)                                                --------->ANAC46                                         --------------->AtSPL8                            <---------ARR14(2) <---------MYB59                            --------->ARR14(2) --------->MYB46(3)                            --------->GLK1(2) --------->ANAC58                      ---------->DOF2    <---------------AtSPL8                           -----------            --------->ICU4 <---------GLK1(2)  --------->ANAC58   *TSS          <---------At4g35610          <---------At4g35610          <---------AtLEC2      ---------->ID1    --------->At4g35610 <- ---------HVH21 --------->YAB1    <---------ARR14(2)  <---------ARR11(3)  <---------ARR11(3)     ---- ----->ALFIN1  <---------YAB1     --------->ARR14(2)  <---------GLK1(2)   --------->ARR11(3)     ----   tgtgagagagagagatgatgataagaaaggaatctggatttgaatggtacccaacagatttttgtcattttttaaagatttcgctgagcatttagtaaca  25234700            <---------TOE2(3)            <---------TOE1(3)      <---------AHL20(2)                                                                            -      <---------YAB1                                                                                <   <----------DOF2                                                                                  - >GT1 --------->AHL20(2)                                                                           <- -----ZmHOX2a(1)                 ----------->GT1                                                   <- ----->ANAC58   <---------DOF5.7(2)    <---------AHL20(2)                      <----------DOF2 <----- ----->ANAC58   --------->MYB52(1)--------->At5g28300                   <---------AHL20(2)     ------   aggacctttttattaaggtaacgacaacttgtaagtggtaaataatccagtcttactatgttcccattttctatttgatttctttagagtattaaacagc  25234800                                          <---------YAB1                                       --------->ICU4                                       <---------YAB1                                     <---------ICU4                                     --------->YAB1                                     <---------AHL20(2)                                     <--------HAHB4                                     -------->HAHB4                                     --------->ATHB51                                     -------->ATHB1               --------->YAB1       --------->ICU4            --------->WOX13(1)      <---------YAB1         --------->TOE2(3)          <---------ATHB51        --------->YAB1            --------->YAB1 -------->GLK1(2)                <---------YAB1 ---------ARR14(2)              --------->AHL20(1) -------->ARR14(2)              <---------AHL20(1)                             --------->GLK1(1) --------ARR14(2)               --------->AHL20(2)                             <---------GLK1(1) --------GLK1(2)               --------->YAB1                                <------ZmHOX2a(1)     -- ----At4g35610 <---------AHL20(2)--------->AHL20(2)                        <---------TOE1(3)    ----- --->At4g35610 --------->AHL20(2)<---------AHL20(2)                        <---------TOE2(3)   ------   agaatctgtatcatcaattatatagtttgtcaaatataattattattagaaatatgcattacaagggattaatggttaaggatttctctcttacaaaata  25234900                                                      <---------AHL20(2)                                                   --------->TOE2(3)      --------->DAG2                             --------->ARR11(3)     ---------->DOF2                             <---------ARR14(2) <----------ID1                                  <---------ARR11(3) -------->DOF2                    ------->TEIL  --------->RVE1(1)                           <-------- ---->AHL20(2)         <---------TOE1(2)    <---------YAB1--------->AHL20(2)          --------->At4g35610 --->AHL20(2)<---------TOE2(3) <---------YAB1  ------->TEIL                           <---------At4g35610   aaaaagaaaaagtttatggtattcgttcgtattatgaatttttgatatgaatatcttaaattgaatatgttttgactaacatgttgtatgctgtcttttt  25235000                               <------------------------ANAC81               <---------ANAC55(2)               --------->ANAC55(2)             <-----------GT1   <<<<<<<<<TBF1                                         <---------YAB1           <-----------HVH21 <------------------------ANAC81 <-------TEIL           --------->AHL20(2)    --------->AHL20(2) <------------------------ANAC81   <---------------AtSPL8    --------->YAB1 --------->YAB1<---------ANAC55(1)    <----------DOF2    --------->DAG2        --------->ICU4 --DOF2   ----------->GT1  <-----------GT1              ---------->DOF2   ----------->GT1   caaaaataaaacatgttacatgttttttttttcttcttctcttttttttttttttttataaagtacatgttatatgctgtaacaattataatccaaatgt  25235100                       --------->AHL20(2)                ----------->HVH21              <----------DOF2                                                   <----------DOF2             ------>ZmHOX2a(2)                                       <-----------GT1            <------ZmHOX2a(2)                                        --------->ZAT6           <---------AGP1                                          <-----------GT1           --------->ARR11(3)                                  --------->ARR11(3)           <---------ARR11(3)      <----------DOF2             <---------AHL20(1)           --------->AGP1       <-----------GT1      <---------ANAC55(2)   --------->YAB1          <---------CCA1(2)    <---------AHL20(1)    --------->ANAC55(2)  <---------YAB1         ----------->ARR10 <---------AHL20(2)   <---------ICU4 <---------ARR11(3) --------->TOE2(3)   ----------->GT1    <----------DOF2        --------->AHL20(1)                   <   caaacttagtttagatctttgacaagtatataatatacttttctttttaaaaattatgtattgaatatttttcactatcattcttttttttttgtcaaca  25235200  Previous    Next  AGI:  At5g62790.1    Description:  DXR (1-DEOXY-D-XYLULOSE 5-PHOSPHATE REDUCTOISOMERASE). Identical to 1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplast precursor (DXR) [Arabidopsis Thaliana] (GB:Q9XFS9;GB:Q9M6U2); similar to 1-deoxy-D-xylulose-5-phosphate reductoisomerase [Hevea brasiliensis] (GB:BAF98290.1); similar to 1-deoxy-D-xylulose 5-phosphate reductoisomerase [Hevea brasiliensis] (GB:ABD92702.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64331.1); contains InterPro domain 1-deoxy-D-xylulose 5-phosphate reductoisomerase; (InterPro:IPR003821); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040); contains InterPro domain 1-deoxy-D-x Range:  from: 25231351    to: 25234665    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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