Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                   --------->ANAC46                                                 --------->ANAC58                                                --------->SPL7                                                ------->TEIL                                                <-------TEIL                                              --------->TOE2(2)<---------TGA2(1)                                              <---------SPL7----------->HVH21                                             <---------ANAC55(1)                                             <---------ANAC58  --------->TGA2(1)                                             <---------ANAC46  --------->bZIP60(1)                                             <---------ANAC55(2)                                             --------->ANAC55(2) <---------YAB1                                             <---------ANAC58  <---------bZIP60(1)                                            --------------->AtSPL3                                            <---------------AtSPL8     <---------TOE2(3)                                            --------------->AtSPL8 --------->TOE2(3)                                 <---------ANAC58--------->ANAC55(2)   <---------TOE1(3)        <----------DOF2-------->P<---------ANAC58--------->ANAC58--------->ICU4    --------->GLK1(1)------>ZmHOX2a(1)      <---------------AtSPL3<---------ICU4 ----->GAMYB       <---------ICU4--------->ANAC55(2)  <---------YAB1  <---------DOF5.7(2) ---->MYB52(1)   <-----------GT1--------------->AtSPL8--------->ICU4--------->DOF5.7(2)   acggagaattcttttgtttaatccttaccacattttcgtaacctattacgtacgtcatttttgtgacatcattaacgtttgaatattcaatatacagaag  25227300                                   <---------YAB1                                 <---------ANAC46                                 --------->bZIP60(1)                      <-----------GT1                                 <---------bZIP60(1)                <---------YAB1                            <---------ANAC46                       <---------ARR11(3)                         --------->ANAC55(2)                     ----------->GT1                         <---------ANAC58                   ---------->DOF2                         <---------ANAC55(2)            <---------bZIP60(1)       --------->MYB52(1)<---------ANAC58            ----------->HVH21  --------->AHL20(2)        <--       ------>MYB46(1) <-----------GT1             --------->ANAC46--------->ARR11(3)     --------->ZAT14       ------>MYB83--------->AHL20(2)              --------->ANAC55(2)  <---------AHL20(2)--------->ARR14(2)  <-----------GT1  <---------AHL20(2) <---------WOX13(1)--------->bZIP60(1)         <---------AtLEC2   aaaataaccaaatggataagttttattacgtcgtgatgtgattgtctgattaaacgtgacatcaaagaagataattaaacaatttttcatggtatactct  25227400                                                                                                  <--                                                                                                  ---                                                                                                  <--                                                                                                  <--                                                                                                 <---        --------->AHL20(2)                  --------->ALFIN1                                 <-------       --------->YAB1                   ---------->DOF2           <---------YAB1      <---------TOE1(3)      --------->AHL20(2)        <---------AHL20(2)             <---------AHL20(2)     <---------TOE2(3)  <---------YAB1               --------->AHL20(2)              --------->AHL20(2)<---------MYB46(3) --------DOF2          <---------ARR14(2)--------->DAG2      <----------DOF2     ----------->GT1 <---   ctttataaataaaaataccaagaccgataccgatttatttgaaaaagtggagagacttatcttcttttattattctcaacaagtggttaagtttaaacgt  25227500         --------->AHL20(2)         <---------AHL20(2)                                               <---------TOE2(3)        --------->AHL20(2)      <---------MYB46(3)                      <---------AHL20(2) <---------MYB46(3)          --------->MYB52(2)                      <---------ICU4 ----MYB46(1)              <---------MYB52(1)                       --------->ICU4         ------>ZmHOX2a(1) ------>MYB52(2)      --------->bZIP60(1)                           <---------YAB1         --------->LBD16 ----MYB83            <---------bZIP60(1)                         --------->YAB1         --------->At4g35610 -------MYB46(3)      <---------bZIP60(2)                        --------->ICU4          ----------->RAV1(2) ------DEAR3(1)       --------->O2        <---------ICU4         <---------YAB1 --------->ARR11(3) --TOE2(3)            <---------O2<----------DOF2              <---------ICU4   <---------GLK1(2)   - ------AtMYB61     ----------->HVH21     <-------TEIL          --------->YAB1 ----------->ARR10------   tggtggtttatttaatttcatttgacgtcgttagtggtttatgttcattacgctccttgttagaatcatgataattaagttagattttggctcctgaata  25227600                                                                                                   --                                                                                                  ---                                                                                                 ----                                                                                                 <---                          <--------HAHB4                ----------->GT1                          ----                          <---------ICU4             <---------ATHB12                           <----           --------->PCF2 --------->ATHB12         --------->WOX13(1)                           -----       ---------->DOF2    --------->YAB1          <---------WRKY12                         --------->KAN4(2)      --------->AHL20(2) <---------ATHB12        <---------MYB52(1)                       <---------ICU4      <---------ICU4     --------->ICU4          ------------>CBF                     ----------->TBP      <---------AHL20(2) <---------YAB1         <-----------HVH21                     <---------AHL20(2) -------->YAB1     <---------TOE2(3)            --------->LBD16                <-----------GT1 <----- --->AHL20(2) <---------ALFIN1------------>CBF --------->ANAC46        <----------DOF2--------->AHL20(2)   aataacaattaatgccccactaatgtaatcatttcaatttgtttcttctccgtcaatgaagaaaatacaaagactttatatttcccatataaatattccc  25227700       <<<<<<<<<CBP60g       <<<<<<<<<SARD1  --------->ANAC58  --------->ANAC58   *TSS --------->PCF2    ------------>CBF --------->HVH21   --------->SPL7 ------>LBD16    --------->ZAT18                                                                    < ----->ANAC46   <---------ANAC58                                                                   <- ------LBD16    ----------->GT1                                                                    <- ----->LBD16    <---------ANAC58                                                                   -- -----LBD16    --------------->AtSPL3                                                              <- ---->LBD16    --------------->AtSPL8             <---------HSFB2a(2)                              <- ----LBD16<---------------------WRI1              --------->HSFB2a(2)       <----------DOF2     -----   cgggacccaaatttcgaagcgtacaatcttctctctcaaaaacgtttcagtttcagaaaacagagcaagaagaaacaactttctctcaaatgcagacgag  25227800                                                       <---------WRKY18(1)                                                      --------->WRKY45                                                      ----------->HVH21                                                      --------->WRKY38(1)                                                      --------->WRKY12                                                     --------->DOF5.7(2)                                                     <---------MYB52(1)                                                 ------>NtERF2                                                 --------->LBD16                                                --------->ANAC46                                                --------->DEAR3(1)          ------>ZmHOX2a(1)                   ------>ZmHOX2a(1) <---------ARR14(2)                    <---------GLK1(2) <---------MYB52(1)                   <---------HSFC1(2) --------->ARR14(2)                   <---------HSFB2a(1) -------GAMYB                         <---------ZAT2<-------GAMYB --------DEAR3(2)                     <------NtERF2--------->DEAR3(1)                              <- -----MYB46(1)                        <---------At4g35610                          <------NtERF2  --- --------->GT1                        --------->At4g35610                ------>NtERF2            <-- -----MYB83                --------->LBD16    <---------ATERF1(1)       --------->DEAR3(1)       ---- --------MYB46(3)    --------->ZAT6   --------->HSFC1(2)             ------->GAMYB <----------------- ------->AtMYB77------>ZmHOX2a(1)     --------->HSFB2a(1)           --------->MYB46(3)    <---------GLK1(1)   tcggttactctccttctcctctaactctccgagttttggcagcttctcctccgccgttgacctcgctgcaatcgccgctcgagtcgtcgaagaattcaga  25227900                                                                                   ------->MYC4                                                                                   ------->MYC2                                                                                   <-------MYC4                                                                                   <-------MYC2                                                                                   ------->MYC3                                                                                   <-------MYC3                                                -------->HAHB4                    <---------O2                                                <---------ICU4                    --------->O2                                             <---------ICU4                       ===================                                    <---------ATERF1(1)                           --------->TGA1a        ------>MYB46(1)            ----------->HVH21                              <---------TGA1a        ------>MYB83           ------>NtERF2 --------->YAB1                       --------->ANAC55(2)      <---------MYB59         --------->ANAC46  <--------ATHB1                    <---------ANAC55(2)      --------->MYB46(3)      <---------ALFIN1  --------->ATHB12                <---------ALFIN1      --------->AtMYB61      <---------MYB55(2)<---------YAB1              --------->ANAC58 -----ZmHOX2a(2)    --------->ARR14(2) ------>NtERF2                       --------->AtLEC2 ------>ARR11(3)    <-----------ARR10 --------->DEAR3(1)                   --------->ANAC58 -------ARR11(3)   <---------GLK1(2)------>NtERF2                          --------->ANAC46       --- ----->GLK1(1)--------->ARR14(2) --------->DEAR3(1)           ==============================bZIP_DOF ----WRI1 --------->YAB1     --------->MYB46(3)--------->ICU4 <----------DOF2 ----------->RAV1(1) ---   gatcacgaccaaacacaatccgattcttctccccaccgcgacgacgataatgattccgacttcgctttcgactgtccaagcaacacgtgttctcagcctc  25228000                                                 <---------SPL1(2)              <---------GLK1(2)              <---------ARR14(2)            ----------->ARR10                --------->ARR14(2)         <------NtERF2                  <-------GAMYB        ------>NtERF2                 --------->SPL7       --------->At1g77200           <---------MYB52(1)       --------->RAP2.3(3)          <-----------HVH21       --------->DEAR3(1)         <-------TEIL  <---------ANAC58       --------->DREB2C(2)        ------>ZmHOX2a(2)  <---------ANAC46       ----------->HVH21         <------ZmHOX2a(2) --------->SPL1(2)      --------->DEAR3(2)        <---------ARR14(2) --------->SPL7      --------->ERF1            --------->ARR14(2)<---------SPL1(1)      --------->ORA47(2)       --------->At4g35610<---------MYB52(1)      --------->RAP2.3(1)      <---------At4g35610--------->SPL1(1)     ------>NtERF2            ----------->ARR10 <---------ANAC58                 ----------->HVH21    ------->GAMYB   --------->HSFB2a(2) --------->At4g35610        --------->LBD16    --------->DEAR3(1)     <-----------HVH21 ------------------>SPL14            --------->DEAR3(1)   --------->DEAR3(2)     ------->GAMYB--------->MYB52(2) --------->ARR14(2)     --------->TOE2(2)   --------->MYB46(3)    XXXXXXXXXXXXXXXXXXXX>MIR842 ----------->GT1             ------->GAMYB  <---------ATERF1(1)  --------->MYB52(1)<---------MYB52(1)<---------GLK1(1)    --------->MYB46(3) ===========MYC_MYB <---------HSFB2a(2)<---------MYB46(3) <---------ARR14(2)    <---------MYB55(2) ------>ANAC58<---------ARR11(3)--------->AGP1<------------------SPL14  <---------GLK1(2) <---------YAB1 ------>ANAC58--------->ARR11(3)<---------GLK1(2)<---------SPL7  <---------LBD16--------->DEAR3(2)   tcgctaccgccgacgagattttctgtaacggtcagatccgtccgttgaatccgtacggtggaaatgctccggtggaatctcaaccgacgagtaagattac  25228100                                                               --------------------->WRI1                                                            --------->LBD16                                                           <---------RAP2.6(2)                                                          <---------LBD16                                                          ------>ZmHOX2a(2)                                                         --------->CCA1(2)                                                         <------ZmHOX2a(2)                                                         --------->ARR14(1)                                                        --------->AGP1                                                        <---------ARR14(2)                    ------>ZmHOX2a(2)                                                        --------->ARR14(2)                    =======                                                        --------->ARR14(3)                   <------ZmHOX2a(2)                                                        <---------ARR14(3)                   ========                                  <---------ARR14(2)    <---------ARR11(3)                  <--------                                 ===============================HOX2a_HOX2a                 <--------                                 ==========================HOX2a_HOX2a                      ---------                           <-------GAMYB                --------->ARR11(3)                  ---------                   --------->ETT(2)                    <---------GLK1(1)                    ---------                   --------->WRKY38(1)                ----------->ARR10                     <--------                   --------->WRKY12                 ------>ZmHOX2a(2)                       ---------                <---------ANAC46 <------ZmHOX2a(1)--------->ARR14(2)                        <--------               <------NtERF2     ================================HOX2a_HOX2a               <------ZmHOX2a(1)             <---------DEAR3(1)<---------TOE2(3)  <---------ARR14(2)              <---------At4g35610         ------>ZmHOX2a(1) <----------DOF2       ===============HOX2a_HOX2a       --------->At4g35610        <---------ALFIN1  <---------DEAR3(1)     ================HOX2a_HOX2a      <---------ZAT2      ------>ZmHOX2a(1)   <---------ANAC46       <------ZmHOX2a(1)                --------->ZAT2   <-   tactcttcctcctcgtcgtcgtagaccggcgttgaggaaactgatgagcgaggatcgagatccggcttcgaattcttcgtcggaagctgaagaggatctt  25228200  Previous    Next  AGI:  At5g62770.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G27880.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN65788.1); contains InterPro domain Protein of unknown function DUF1645 (InterPro:IPR012442) Range:  from: 25227721    to: 25228833    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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