Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100          <----------DOF2            --------->TOE1(3) ------->ICU4                    ------->TEIL --ZmHOX2a(1)            --------->ZAT18            --------->CCA1(2) ----->GT1               <---------ZAT18           <---------AHL20(1)                     --------->TOE1(3) ---TOE2(3)             ---------->ID1             --------->AHL20(1)                     --------->TOE2(3) ---TOE1(3)        --------->ARR11(3)              <---------AHL20(2)                    ----------->RAV1(2) ---AGL15          --------->ARR14(2)        ----------->GT1                   <---------ZAT14 -->AGL15          <---------ARR14(2)    ---------->DOF2    ---------->DOF2    --------->ZAT14------- ----AGL2          <---------ARR11(3)  >>>>>>>>>MYB98    ------->TEIL --------->YAB1   <-----------GT1   aaaaattagcctttatatgaagatttgtccacttgaaccctaacaaagagtaatatatgaatcaaagctaaatcaaaacagagcagttttaacctgaatc  25169400                                                      ---------->DOF2                       --------->AHL20(2)         ---------->DOF2                       <---------AHL20(2)    ------>MYB83                                     -------                 ----------->RAV1(1)         ------>MYB46(1)                                  -------             --------->REM1(1)              ----------->RAV1(1)                   ---------->DOF2         <---------At4g35610              --------->MYB46(3)            ----------->GT1       ------- >TEIL   --------->At4g35610            <-----------GT1            <---------TOE2(3)       <---------REM1(2)   taaactcatacagctacaacaacaattaatcccaattcgatttcaccaacaaaaaagaaagggaagattgagaatggagaaaacaaaagcccttacacgc  25169500                    <---------ANAC58                    <---------ANAC58               <---------ARR14(2)               ------->TEIL               <---------ARR11(1)               --------->ARR14(2)                                                        <---------MYB52(1)               <-----------ARR10                                                     <---------At5g28300               --------->GLK1(2)                                ---------->ID1     --------->WRKY12              <---------CCA1(2)--------->YAB1         <---------ANAC58             --------->WRKY38(1) -->ANAC58    <---------ARR14(1)           <-------TEIL ------>NtERF2             <---------MYB52(1) -->ANAC46  <---------ANAC58 --------->ANAC58         <---------ANAC58          <---------ANAC46 -->ANAC58  <---------ANAC58 --------->ANAC58     <----------DOF2            <-----------GT1   ttaatttctctcttgcgaatctgcttgcgataagcatcagtagggttcatcactttgcctcccttcgtcgtcttcatattttccgtttaccgttcttcaa  25169600                                                       <------ZmHOX2a(2)                                                      --------->AGP1                                                      --------->ARR11(3)                                                      <---------AGP1                               <---------CCA1(1)      <---------ARR14(2)                               <---------RVE1(1)      <---------ARR11(3)                   --------->GLK1(1)                  <---------ARR14(3)                   <---------GLK1(1)                  --------->ARR14(3)                  --------->ARR14(2)                  --------->ARR14(2)                  <---------ARR14(2)    --------->ANAC58                                 <---------YAB1                 <------ZmHOX2a(1)      --------->ANAC58                                 <---------AHL20(2)               <---------TOE2(3)        --------->ANAC46------>ZmHOX2a(2)                --------->AHL20(2)      <---------ALFIN1--------->At4g35610   <---------KAN4(2)                           --------->AHL20(1)     --------->MYB46(3)       <---------ARR11(3)    ----------->ARR10   <----------DOF2 <---------AHL20(1)     <---------MYB55(2)       --------->ARR11(3)  ---------->DOF2    <-----------GT1    --------->AHL20(2)   tctccctcccaccgatttaggatttgctcacagatattttacaaggaataaacaaagatcttgtggagatttatcttttctctcgcacaatataatttga  25169700                                      ----------->HVH21                                       <------                                    ----------->RAV1(2)                          ---------->ID1    --                       <---------GLK1(2)                             --------->ANAC58      ----------                 --------->ATHB12 ------>ZmHOX2a(1)                  --------->ANAC58  <------------CBF        ------>ZmHOX2a(1)   <-----------GT1                        *TSS       --------------->AtSPL8       --------->TOE2(3)  <-----------GT1                         --------->ANAC46  ------>ZmHOX2a(1)   attttgtttcctcaatacaagattggattttctctcctccctgactctcgctcgatctatgtctatctacgaagcaaatttttgtccttcattgtcaatt  25169800                 <---------ARR14(2)                                   --------->ANAC55(2)                 --------->ARR14(2)                                   <---------ANAC58            <---------ANAC58                                          <---------ANAC58            <---------ANAC46                                      <---------YAB1            <---------ANAC58                                     <---------AHL20(2)         <---------SPL7               --------->DAG2  <---------AHL20(2)        --------->YAB1 ------CBF<---------MYB52(1) --------->ZAT14         <---------AHL20(2)        <---------ATHB12 ----->TEIL --------->MYB52(2)       ---------->DOF2 --------->AHL20(2)    --------->MYB46(3) -->CBF <---------MYB46(3)   <---------ZAT14   --------->YAB1  <---------AHL20(2)       ----------->GT1   gaatcttgggccgttcgtggattttcttatgtatactgaaaaagcccattagtaattttatacatattattttcgtaaccaatgataaaaatgttataaa  25169900         --------------->AGL15                                                           <---------AHL20(2)        <---------YAB1                                                                <---------AHL20(1)      <-----------GT1                                                                 --------->AHL20(1)     <---------YAB1                                                                   --------->ARR11(3)   --------->ATHB51                                              --------->AHL20(1)   <---------ARR11(3)   <---------ICU4                                     --------->ANAC58              --------->AHL20(1)   -------->ATHB1                                     --------->ANAC58       ----------->GT1  <---------AHL20(2)                                 --------->ZAT18    <---------bZIP60(1)     <----  --------->ICU4                                     --------->SPL7     --------->bZIP60(1)<---------  --------->AHL20(2)                            ---------->DOF2  --------->AHL20(2) --------->ARR11(3)  --------->AHL20(1)                         <-------TEIL        <---------AHL20(2) <---------AHL20(1)  <---------YAB1      ----------->GT1   <-----------GT1 <---------------------WRI1  <---------ARR11(3)   caaaattattactattgagagcatgggtgaaaaattgcattttcacgttcaaaagtacgccgataaataaaatgacatcgggtaaaaatattttttcaac  25170000        --------->TOE2(3)     ------->GAMYB                   <---------ANAC55(2)                  ----------->HVH21    <---------MYB52(2)               --------->ANAC55(2)    --------->ANAC46    --------->MYB46(3)               ----------->GT1        --------->ANAC58                   <----- <----------ID1                 <---------YAB1              --------->ANAC58                 <------- -----ICU4                 <---------ICU4      <---------ANAC58      <------MYB83            <------- --GT1  --------->YAB1 ---------->DOF2         <---------ANAC58      <------MYB46(1)<------ZmHOX2a(1)   atgacaacaaacttaatacatgcctaaaagcattacaataagtaactaggcttgagcaattcacacaagataggttatgacccataggatgtgtttcgtt  25170100                                                                                       ------>ZmHOX2a(2)                                                                                      <---------GLK1(1)                                                                                      <------ZmHOX2a(2)                                                                                      --------->GLK1(1)                                                                                     <---------ARR11(3)                                                                                     <---------ARR14(2)                              --------->ARR14(2)                           --------->MYB46(3)                          --------->ZAT2                                 ----------->RAV1(1)                   --------->MYB46(3)                             ===================================                ----------->HVH21                                 --------->TGA1a    <---------AGP1<-              --------->O2<---------ZAT2                          <---------TGA1a    --------->ARR11(3)              <---------O2--------->At4g35610                    <---------TOE1(2)   <-----------ARR10      <---------ALFIN1 ------->GAMYB         <---------ALFIN1   ------>NtERF2        --------->GLK1(2) ----MYB52(1) <---------ANAC55(2)    =======================================bZIP_DOF --------->ARR14(2) --ANAC58     --------->ANAC55(2)    <----------DOF2           --------->DEAR3(1)    <---------ARR14(3) --ANAC58     --------->ANAC46<---------ARR14(2)               ----------->HVH21    <------ZmHOX2a(1)   actggtcatcacctctacgtgacaaccgagcagaaccagctttagccaaacccgaatagtagtctccgacgtttgcaacaaatagaggatctctctcttc  25170200                                 --------->KAN4(2)                                  <---------ANAC58                                ------>ZmHOX2a(2)                        >>>>>>>>>>>>>>>>>LFY <----------DOF2              <---------ARR11(3)<---------WOX13(1)   --------->ARR11(3) ===========bZIP_DOF        <---------YAB1 <---------At4g35610       <---------ARR11(3) --------ATHB12           --------->YAB1 --------->REM1(1)     ----------->GT1      <---------ANAC58   aatctttagagagtcgtaacgttttgaaccatgatcgttcccttcatcagattgctccaagtcttctgttaaatcttccattgttttcttgagattagcc  25170300  Previous    Next  AGI:  At5g62640.1    Description:  ELF5 (EARLY FLOWERING 5). similar to unnamed protein product [Vitis vinifera] (GB:CAO62481.1); contains domain PTHR13361:SF1 (PTHR13361:SF1); contains domain PTHR13361 (PTHR13361) Range:  from: 25166659    to: 25169767    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g62650.1    Description:  similar to hypothetical protein OsI_000940 [Oryza sativa (indica cultivar-group)] (GB:EAY73093.1); similar to hypothetical protein OsJ_000926 [Oryza sativa (japonica cultivar-group)] (GB:EAZ11101.1); similar to Os01g0225300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042459.1) Range:  from: 25169851    to: 25173161    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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