Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                        ---------------                                                                                     ----------------                                                                                     <---------ANAC58                                                                                     <---------------                                                                                 --------->At4g35610                                                                       ---------->DOF2<--------------                                                                  <---------------AGL15                           --------->DAG2                         --------------->AGL15                 <---------GLK1(1)                               ----------------->AG<---------ANAC58                 --------->GLK1(1)                               ----------------->AGL1               <------ZmHOX2a(1)                                 ----------------->AGL3             <---------TOE1(2)  <-----------GT1     ------->TEIL ----------------->AGL2<----------DOF2        <---------AHL20(2)---------->DOF2        <---------YAB1  ====================================   ttaagtgtattttcttaggaattctccaaaaagtttaccaattcatcaactatgaatataaaacgataccaaaaaaagaaaacagttgcctttgatggga  25087800 >AGL15                                                                                        ------ ->AGL1                          --------->AtMYB61                                            ------- --AGL1                       <----------ID1                                        --------->HSFB2a(2) -AGL15              <----------DOF2                                                <---------HSFB2a(2) =MADS_MADS         <---------DAG2            <-----------GT1 <-----------GT1    <----------DOF2   aaatgaacaaaaactcaaatacccttttcaaaacaccaaaactcattttctctatacttgtatataacaaaacatactcagccctttcagaaacaaaaaa  25087900                                                                                              =======                                                                                              ------>ZmHOX2a(2)                                                                                             <------ZmHOX2a(2)                                                                                            <--------                                                                                            ---------                  <----------DOF2                                                           <--------                 <---------DAG2                                                             <--------           <---------ICU4                                                                   ---------           <---------------AtSPL8                                                           ---------           --------------->AtSPL8                              <---------KAN4(2)            ---------        <---------ICU4                                     --------->ANAC58                <------ZmHOX2a(1)        --------->YAB1                                <---------HSFB2a(2)                <---------TOE1(2)        -------->HAHB4              <---------At4g35610  ---------->DOF2         <----------DOF2       --------->ICU4               --------->At4g35610<------NtERF2             <---------DAG2<-----     --------->YAB1                --------->ANAC46   --------->HSFB2a(2)     <---------ARR11(3) --->DAG2 --------->ICU4   <<<<<<<<<TBF1 --------->TOE2(3) --------->ANAC58   --------->ARR11(3) --->DOF2 <---------YAB1<<<<<<<<<TBF1  -------->P  <-----------HVH21      ---------->DOF2<---------TOE2(2)   gtagacataataatgagtaccttttcttcttcttcatcagcaacctctaaaaccgtcgggaaaggaattttcataccaaagagctttatcgcaggatctt  25088000         --------->ICU4 ==============================HOX2a_HOX2a -ARR14(2) >ARR14(2) -ARR11(3)     <---------TOE2(3) -ARR14(3)    <-----------GT1                --------->ANAC46 >ARR11(3)  <---------YAB1          <----------DOF2 --------->GLK1(2)                <---------LBD16 >ARR14(3)<---------ICU4        --------->ZAT18 <---------TOE1(2)                <----------DOF2 >GLK1(2)<---------YAB1         <---------ZAT18 <---------TOE2(2)            <----------DOF2 -----DOF2<--------HAHB4------>ZmHOX2a(1)<-----------GT1               <----------DOF2   tagtttccagcattattatcgttttcctaagatgtgctcttttttactcgtaagtttctgactctctgtgtctcttttcctttcttttcagggtgttttt  25088100                                                                                                    <                                                                                                    <                                                                                                  <--                              --------->ALFIN1                                               --------                          <---------ANAC46                                           --------->ANAC55(2)                     <---------ANAC46                                 --------->CCA1(2)      ========               --------->ARR11(3)    --------->MYB111(1)           ----------->ARR10 <---------ANAC55(2)               <---------ARR11(3)   <--------P              *TSS--------->TOE1(2)   <-------TEIL  ---   <-----------GT1   <-----------RAV1(1)                    <---------GLK1(1)   <---------YAB1-------   ttttgtttctcttcgaagatgttttgtggggggtttgggtagtttggaaatttttggtttggaaatcgtgagatttgggattttgatacgttttaaaaag  25088200            <-----------HVH21           <---------ZAT2           --------->TGA1a           --------->bZIP60(2)           ==================bZIP_DOF  --------->ALFIN1 ---------ANAC46 ---------bZIP60(2)                                                 <----------DOF2 -------ZAT14                                                    <-----------GT1 -->DOF2   --------->O2 <<<<<<<<<<MYB80         <-----------RAV1(1) <---------DAG2 ====================bZIP_DOF         --------->AtMYB61     <---------RVE1(1) ------>ZAT14     <----------DOF2<---------HSFB2a(2)   <---------At4g35610    <---------ALFIN1 -->DAG2 <-----------RAV1(2)     --------->HSFB2a(2) <---------ANAC46  ---------->ARF1 ---------->DOF2   tgaagtggatgccaggtcagcattttggtttgattctagaccacaagtttatgtggcctctgatattttacttttctcccaaaccccattaaaacccata  25088300                                                                                                 ----                                                                                                 ----                                                                                    <----------DOF2                                                                                --------->ZAT14  ----                                                                              --------->ANAC46 <-----                                                                            --------->ZAT6  <--------                                                                       <---------GLK1(2)  <---------MYB52(1)                 <---------AHL20(2)                                    <---------ARR11(3) --------->DOF5.7(2)       <----------DOF2                                 <---------AHL20(2)   <-----------GT1--------->WRKY38(1)  <---------AHL20(2)<----------DOF2             --------->GLK1(2)      --------->ARR11(3)<-------GAMYB   gcatataatcttttgttattttctttaaactttgtcaaaactattcgaagaatcgatttttttatatgttttagattttcactaaactttccgttaacca  25088400        --------->DAG2       ---------->DOF2                                                                      ---------   <------ZmHOX2a(2)                                                            <---------TOE1(1) ----->MYB52(1)                                                                 <---------TOE2(1) -->MYB46(1)                <-------TEIL                                      ------>ZmHOX2a(1) -->MYB83           ----------->GT1      <-------TEIL                   --------->ALFIN1   <---------ATHB12 ----MYB59 --------->ARR11(3)       --------->MYB46(3)           --------->MYB52(1) <------ZmHOX2a(1) -DOF5.7(2)<---------ARR11(3)  --------->ANAC46           ----------->GT1    --------->TOE1(2)   aacagatcaaaaaggtcttatgtagttatatacatggaacaaatgcataacaagtttgaacgataaaaaacgaagtgctcctacgaggatgcaataaagt  25088500                                                                 --------->TOE2(3)                                      --------->YAB1           <---------ARR11(3)                                     <---------AHL20(2)        --------->ARR11(3)                                    --------->AHL20(2)         <-----------ARR10                       --------->ANAC46                       <---------CCA1(2)      --------->DAG2   --------->ANAC58              --------->GLK1(1)     ---------->DOF2   --------->ANAC58             <---------ARR11(3)     <-----------GT1 ->DOF2       <---------YAB1  <---------MYB52(1)    --------->ARR11(3)    --------->AHL20(2)   tttcagaaaaagtgtttttataaacacgcttcgttatatataatactgatataagatttctaacatatcttaacaattatctatctattgttgaattgaa  25088600                                                                                        <---------At4g35610                                                                                        --------->At4g35610                                                                                   ==================                                                                                   --------->ANAC58                                                                                   <---------TGA1a                                                                                   <---------O2                                                                     <-----------RAV1(1)--------->ZAT2                                                                     <---------AtMYB61  <---------ZAT2                                                                   <----------DOF2 --------->ANAC46                                        ----------->GT1            ==========================bZIP_DOF                                        <------MYB83              <---------ANAC58 --------->ANAC58 <                                        <------MYB46(1)           <---------ANAC58 --------->TGA1a  <                                       --------->MYB111(1) <------NtERF2           --------->O2     <                                       --------->MYB111(2)--------->LBD16     ----------->HVH21     -                                       --------->MYB46(2)<---------LBD16      <---------ZAT18<-------             <---------ANAC55(2)       --------->MYB59   <---------ANAC46   <---------At4g35610     <           --------->YAB1             <---------MYB55(1)<---------LBD16     --------->At4g35610     <          --------->ICU4              <--------P   <---------At4g35610      --------->ZAT2   <-------          <---------ATHB51     <----------DOF2     --------->At4g35610      <---------ZAT2   <-------   gaaaaaaaaacaattatgtaaactgtttagaaacttttgggtaggtaaatgtcagcatcgcggggatggctttggtgcagctcacacgagagctgtcttg  25088700  Previous    Next  AGI:  At5g62430.1    Description:  CDF1 (CYCLING DOF FACTOR 1); DNA binding / protein binding / transcription factor. Identical to Dof zinc finger protein DOF5.5 (DOF5.5) [Arabidopsis Thaliana] (GB:Q8W1E3;GB:Q9FJJ9); similar to CDF3 (CYCLING DOF FACTOR 3), DNA binding / protein binding / transcription factor [Arabidopsis thaliana] (TAIR:AT3G47500.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64539.1); contains InterPro domain Zinc finger, Dof-type; (InterPro:IPR003851) Range:  from: 25086319    to: 25088160    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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