Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                  --------->ARR11(3)                                                <---------ARR11(3)                                         --------->LBD16                                       <---------LBD16                                <-----------------AG                          --------->ALFIN1  ---------->DOF2                                  --------                         <-------MYC3--------->ARR14(2)                                      <-------         --------->HSFB2a(2)    ----------------->AGL1                             ---------->DOF2---         <---------HSFB2a(2)   <-----------------------TaNAC69(2)                 ---------->DOF2---- --------->At4g35610     ------->MYC3<---------ARR14(2)                 <---------GLK1(2)<------NtERF2   atcagcaccatcgagaaccatatcaaacgtggaagcctgaatcgggaaaagagcttcaataccattcgccttaagcttctccctcaaaggcgcagaaatc  25000800                                             --------->ANAC46                                            ------->GAMYB                                           --------->DEAR3(1) ->GLK1(1)                               ---------->DOF2                           <---------ZAT2 --GLK1(1)        <---------TOE2(3)    ------>ZmHOX2a(1)                           --------->ZAT2 ------>LBD16     <---------TOE1(3)   --------->TOE2(3)          <---------At4g35610 ----->ANAC46 <----------DOF2      <---------ARR11(3)<-----------GT1     <<<<<<<<<TBF1   cgaaacttagaaacagcattagggttatcaacttcaacatcctcaacgcccaacttaaccttcttgctgctcttcttcttctccgagcttgaatcgctct  25000900                       <---------SPL7               --------->ANAC46              <---------LBD16              --------->LBD16              ------>ZmHOX2a(1)              --------->HSFB2a(2)                                                                  <-           ------>ZmHOX2a(1)                          <<<<<<<<<TBF1                           <------          <---------ALFIN1                   <-----------GT1                                 --------        ------>ZmHOX2a(1)             ------>ZmHOX2a(1)       ------>NtERF2                  <-------   tcacttcatcctcctcctcggaagccttacgcttcttatccttcttcttactcttcttcttctccgactcttcttcatccgaatcagatagtttcagctt  25001000                                          --------->ANAC58                                          --------->ANAC58                                        ---------->DOF2                                    --------->ARR14(2)                                    <---------ARR14(2)    ------>ZmHOX2a(1)              <---------GLK1(1) --------At4g35610                 --------->GLK1(1) ---GLK1(2)<---------------AGL15 <---------ANAC58                                 --------->At4g35610 ->At4g35610                     <---------ANAC58                       <----------DOF2 --At4g35610                 <---------LBD16         <<<<<<<<<TBF1    ------>ZmHOX2a(1)   ctgctccttcttccccttcttagaatcaagctctggggtatccaaagccatcttcttcttcatcttcttctcctctttcttatcagataacattagggaa  25001100                                      <---------ANAC58                            ------->TEIL                            <-----------ARR10                                                  ------                            <---------ARR11(1)                                                 ------                           <---------GLK1(2)                                                  -------                           <---------CCA1(2)                                                 <------ZmHOX2a(1)                           <---------ARR14(1)                                     --------->ANAC58                       --------->GLK1(2)<---------MYB46(3)                        <----------ID1               --------->MYB52(1)     <---------ANAC58                            --------->ANAC58  <             <---------ARR11(3)     <---------YAB1                  ---------->DOF2    ---------->DOF2             --------->ARR11(3)   <---------At4g35610<---------TOE2(3)          --------->CCA1(2)  *TSS   ggcatttagaaggaagataatggagaatcgaatctcttctgcttgttgagagattgaggctatgaagtgcgaaagcagggagagacgacaaaagaggacg  25001200                                                             <---------------AGL15                <--    <---------ANAC58                               --------->TOE2(3)                         <-------    <---------ANAC58    --------->AHL20(2)         --------->TOE1(3)                     --------->AHL20(2) --->ANAC58             <-----------TBP         --------->GLK1(1)    ------------>CBF  <---------MYB52(1) --->ANAC58           <-----------TBP --------->ARR11(3)     --------------->AGL15   <---------ANAC46 -->SPL7    <-----------GT1           <---------ARR11(3)    --------->ZAT6      <---------At4g35610 ------------CBF    <----------DOF2 <---------TOE2(3)     <-----------GT1       --------->At4g35610   acaattgctagggtttacctctctttttatatagttttgagattttagagaaaccctaatttactctaatgtgcaatctctaatctgccgtttatttatt  25001300                          --------->WRKY18(1)                         <--------ZAP1                         <-----------HVH21                      --------->HSFB2a(2)                <---------ANAC58                                                              <------                <---------ANAC58                                                             <-------                <---------ANAC46          --------->ARR11(3)                                 <-------           <---------ANAC58               <---------ARR11(3)                           <-----------RAV1(1)           --------->ANAC55(2)           --------->CCA1(1)                     --------->ARR14(2)           <---------ANAC58              --------->RVE1(1)                     --------->ARR11(3)           <---------ANAC55(1)   --------->ANAC46                              <---------ARR11(3)           <---------ANAC46      --------->ANAC58           <---------AHL20(2)--------->RVE1(1) -------YAB1   <-----------------------TaNAC69(2)     <----------DOF2         --------->CCA1(1) --AHL20(2)<---------ANAC55(2)   --------->ANAC58<----------DOF2 ---------->DOF2     <----------DOF2   ctgataagagaatgcgtgtcgtttctaggtcaaacactcaaaaatatctatctttcctttttttaatcaaagactcaaaaatatcttctttgttggcttt  25001400        --------->YAB1        ----------->GT1    <---------YAB1                           ---------->DOF2   --------->AHL20(2)                       --------->AtMYB61   <---------AHL20(2)               --------->YAB1  --------->YAB1                    ----------->GT1 ----DOF2                          <---------YAB1 --ANAC58     <----------DOF2    --------->CCA1(2)           <---------ICU4 --ANAC58  <-----------GT1      <---------ARR14(2)     --------->YAB1                            <---   tctattaaaatagtaactttcttcatttttcgacgatatgataaaaccaaagctcaaacataatcaattcgttttctatcacatatatagttgatgaact  25001500                                                                        --------->YAB1                                                                <-----------GT1                                            --------->GLK1(2)--------->ANAC58              <---------ANAC55(2)                          <---------At4g35610       --------->ICU4     <---------YAB1      --------->ANAC55(2)                      --------->ANAC46     <---------GLK1(2) --------->ANAC55(2)      >>>>>>>>>GT-1                   <-------TEIL       <-----------GT1        <---------ANAC55(2)   ----------->GT1                  --------->CCA1(2) --------->CCA1(2)        ----------->GT1      <---------TOE1(3)                 --------->ARR14(2)--------->ARR11(3)        --------->ANAC58     <---------TOE2(3) --------HVH21   <---------ARR14(2)<---------ARR11(3)   <------ZmHOX2a(1)         <---------YAB1<----   gtcacaaatttctaaaatggatacacactgctcataagatttacagactctgtaattaggagtaagtaacttcatcatagatttatggttaatacttaat  25001600                            <-------TEIL                            <---------ZAT18                        <---------------AtSPL8                        --------------->AtSPL3                        --------------->AtSPL8                      --------->MYB52(1)                   --------->ANAC46                  <---------------AGL15                  --------------->AGL15                  --------->LBD16                 ----------------->AGL2                                            <---------At4g35610                 ----------------->AG                           --------->ANAC46   --------->At4g35610                 ----------------->AGL1                       <-----------GT1  --------->MYB52(1)                 <-----------------AGL1                 <---------YAB1 --------->LBD16                 <-----------------AG                  <---------AHL20(1)   --------->YAB1 -------GT1   --------->ARR14(2)                   ------>ZmHOX2a(1) <---------LBD16               --   acagttctgagacccatttccccaaaacggtacacatttattcttcacaagtcctaatatgtttatacaaaaccggaaacataacagcttacaagagcaa  25001700  Previous    Next  AGI:  At5g62190.1    Description:  PRH75 (plant RNA helicase 75); ATP-dependent helicase. Identical to DEAD-box ATP-dependent RNA helicase 7 (RH7) [Arabidopsis Thaliana] (GB:Q39189;GB:Q94BX7;GB:Q9LVB7); similar to EMB1138 (EMBRYO DEFECTIVE 1138), ATP binding / ATP-dependent helicase [Arabidopsis thaliana] (TAIR:AT5G26742.2); similar to EMB1138 (EMBRYO DEFECTIVE 1138), ATP binding / ATP-dependent helicase [Arabidopsis thaliana] (TAIR:AT5G26742.1); similar to RNA helicase [Vigna radiata] (GB:AAF40306.1); similar to DEAD/DEAH box helicase family protein [Oryza brachyantha] (GB:ABG73436.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49765.1); contains InterPro dom Range:  from: 24997494    to: 25001199    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g62200.1    Description:  embryo-specific protein-related. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G41475.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49764.1); contains InterPro domain Embryo-specific 3 (InterPro:IPR010417); contains InterPro domain Lipase/lipooxygenase, PLAT/LH2 (InterPro:IPR008976) Range:  from: 25001462    to: 25002937    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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