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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                      --------->ATERF1(1)
                                      <------NtERF2
                                     ------>NtERF2
                                    <---------DEAR3(1)
                                    --------->DEAR3(1)
                                    ----------->HVH21
                                   --------->ATERF1(1)
                                  ------>NtERF2
                                  <---------ORA47(2)
                                  <---------RAP2.3(1)
                                  <---------RRTF1(1)
                                  <---------ERF1
                                  <---------ATERF1(1)
                                 <---------DEAR3(1)
                                 <---------RAP2.3(3)
                                 --------->ATERF1(2)
                                 <---------ANAC46
                                 <---------ATERF1(2)
                                 <---------RAP2.3(2)
                                 --------->DEAR3(1)
                                ------>NtERF2
                                <------NtERF2
                               <---------RAP2.3(1)
                               <---------RRTF1(1)
                               <---------ATERF1(1)
                    <-------PIF5--------->ATERF1(1)
                    ------->PIF5<---------ABI4(1)
                   <---------ANAC58--------->RAP2.3(1)
           --------->O2        <---------DEAR4(2)
           --------->TGA1a    <---------RAP2.6(2)
        <---------DEAR3(1)    <---------RAP2.3(2)
        --------->DEAR3(1)    <---------RRTF1(2)                    <-------GAMYB
        --------->ETT(2)      <---------DEAR3(1)                   --------->MYB46(2)            ---
     ------>ZmHOX2a(2)       --------->ATERF1(1)                   --------->MYB111(1)           <--
    <------ZmHOX2a(2)      --------->ARR14(2) <---------ANAC58     --------->MYB52(2)        <------
   --------->ARR14(2)    <---------MYB46(3)   <---------ANAC46     <---------MYB46(3)        ------>ZmHOX2a(1)
   <---------ARR14(2)--------->ALFIN1<---------ATERF1(1)           --------->MYB55(2)       --------
 --------->LBD16   <---------ANAC58<------NtERF2                   --------->MYB111(2) <---------MYB52(1)
---------LBD16 --------->HSFB2a(2)<---------RAP2.6(1)     <------MYB46(1)              --------->DOF5.7(2)
----->TEIL <---------O2 <---------ANAC46------>NtERF2     <------MYB83     <---------ANAC46---------
------SPL7 <---------TGA1a <---------ARR14(2) <---------ANAC58    <--------P        ---------->ID1<-
-->At4g35610   <---------HSFB2a(2)<---------DEAR4(2)     --------->MYB59<---------AtMYB61 <---------YAB1
 
gtaccggatcgtcgacgtctggacgtggtggatgcggcggcgacgacttgcgtttctagtttggtttgggtagttgtggtttgtttagtcgttatcctaa  24864200
                                          --------------->AGL15
                                          <----------DOF2
                                        ---------->ID1
                                       <-----------GT1
                                      <<<<<<<<<<GT-3b
------>AHL20(2)                   --------->AHL20(2)
-------AHL20(2)                   <---------AHL20(2)        <---------AHL20(2)                   ---
---YAB1    <---------AHL20(2)    --------->AHL20(2)         --------->AHL20(2)          --------->ANAC46
->TOE2(3)  --------->AHL20(2)    --------->AHL20(1)       <----------DOF2               --------->ANAC58
>YAB1    <----------DOF2         <---------AHL20(1)      --------->TOE1(3)              --------->ANAC58
----------GT1                    <---------AHL20(2)      --------->TOE2(3)           <---------REM1(2)
 
ttaactattagtctttaatttagtcttcttggctaatttatttttctttttttgtcaaaacctttaatttgttatggctaatttgttatacacgcagttt  24864300
             <---------ARR14(2)
             --------->ARR14(2)         ---------->DOF2                        <-----------GT1
        --------->MYB52(1)     --------->WRKY18(1)                  <---------ZAT14              ---
        <---------DOF5.7(2)  <------MYB46(1)         <-------TEIL   --------->ZAT18           <-----
      --------->DOF5.7(2)    <------MYB83           --------->CCA1(2)   ----------->GT1       ------
------>TOE2(3)              --------->MYB59      <---------TOE2(3)  --------->ZAT14   --------->YAB1
 
tcttaatgcgttaacggattttaaaaccaatttggtcaaactcaaaagtactaagatacatttgagttaagagcactgaaaataaccattcatacatcga  24864400
                                   --------->YAB1
                                   <--------ATHB1
                                   <---------ICU4
                                   --------->ATHB51
                            --------->WOX13(1)
                           --------->AHL20(2)
                           <---------AHL20(2)                                                      <
                       <---------YAB1    ----------------->AGL1                                  ---
                  <---------ICU4   <------------ATHB5     --------->CCA1(2)                    <----
                 --------->ICU4   <---------ATHB51       --------->AHL20(1)              <---------ANAC46
------->DOF2   <---------bZIP60(1)--------->ICU4         --------->ARR11(3)              <---------ANAC58
----HSFB2a(2)  --------->bZIP60(1)<---------ATHB12      --------->AHL20(2)               <---------ANAC58
--->HSFB2a(2)<-----------HVH21<---------ATHB12   <----------ID1          <----------ID1 <---------DEAR3(1)
 
gaaagaactgtgaaggtgtcatcagtataattaatcaataatgggccagtttgagacaaatatatgggcctggtttgagacaaatagatgggccgtggat  24864500
       <---------ANAC58
       <---------ANAC46 ------------------------>ANAC81
       <---------ANAC58 <---------------------WRI1
---------AHL20(2)  ------------------------>ANAC81                                          <-------
-------->TBP     <------------CBF          --------->GLK1(2)           <---------ARR14(2)   <-------
-------TBP<-----------HVH21         ---------->DOF2 *TSS               --------->ARR14(2)   <-------
 
atataaacttgtgtgtcagaaattgcaaacgaagaaaacaaaagagaatttgagaaacgactgtttgaaattcgaatccatttctcttcggacttgtgtg  24864600
                                                                                <---------DEAR3(1)
                                                                   --------->RAP2.3(1)
                                                                  ------>NtERF2 <---------ANAC46 ---
                           --------->LBD16                        <---------ATERF1(1)     --------->ALFIN1
                           ------>NtERF2                          --------->LBD16     ---------->DOF2
                          --------->ANAC58               --------->ANAC46    --------->ANAC46    <--
                          --------->ANAC58          --------->GLK1(2)       <---------LBD16   ------
                          --------->ANAC46        --------->HSFB2a(1)     <---------REM1(2)---------
    <---------GLK1(1)    <---------LBD16          <---------HSFB2a(1) <------NtERF2  ===============
    --------->GLK1(1)<---------GLK1(1)            --------->HSFC1(2) ------>NtERF2   <------ZmHOX2a(1)
--ANAC58             --------->GLK1(1)         --------->LBD16   --------->ANAC46 <------NtERF2 ----
--ANAC46    ------>ZmHOX2a(1)                 --------->ANAC46   <---------DEAR3(1)  ===============
--ANAC58 ------>ZmHOX2a(1)<<<<<<<<<<E2Fa     <---------LBD16    <---------LBD16<---------LBD16<-----
 
ataactgatttcctcctacaatggagttcccgccaagagcgttttatccacggagattccaggcctctccggcgcaatacacggcggaggaaagtgctgc  24864700
              <---------GLK1(1)
              <------ZmHOX2a(2)
              --------->GLK1(1)
             --------->ARR14(2)
             <---------ARR11(3)
             --------->ARR11(3)
             <---------ARR14(2)
             <---------AGP1
             --------->ARR14(3)
             --------->AGP1
         <------NtERF2
         --------->ATERF1(1)
        ----------->RAV1(1)
        ------>NtERF2
       --------->ANAC46
       --------->DEAR3(1)
      --------->RAP2.3(1)
     <---------RAP2.3(1)
    <---------DEAR3(1)                                             <---------ANAC46
  <---------ARR14(2)      --------->ZAT2                           <---------ANAC58
  --------->ARR14(2)      --------->At4g35610                      <---------ANAC58              ---
------>At4g35610       --------->CCA1(2)      --------->ZAT18     --------------->AtSPL8       <----
-------At4g35610   --------->LBD16           ------>ZmHOX2a(2)    <-----------------------TaNAC69(2)
--->At4g35610<---------ARR14(3)          --------->ETT(2)         <---------------AtSPL8      <-----
>At4g35610  <---------CCA1(2)  --------->ANAC46                   --------------->AtSPL3      <-----
======================HOX2a_HOX2a <---------ALFIN1      ----------->GT1                     ------>ZmHOX2a(2)
------->RAV1(1)------>ZmHOX2a(2)<<<<<<<<<<<<<<<<<LFY  ---------->DOF2                      <------ZmHOX2a(2)
=====================HOX2a_HOX2a----------->RAV1(1) --------->ANAC58  --------->SPL7      <---------ARR14(2)
----At4g35610<-----------ARR10 ----------->HVH21    --------->ANAC58<---------SPL7        --------->ARR14(2)
 
agcagtatcggcgccagatctccgagataagctcgcgacactggtcgatcgcaccaagaaagtgaaaatggcgtaccatcaactccaatcgcagatcgcg  24864800
      <---------HSFB2a(2)                                   <---------ARR14(2)
      --------->HSFB2a(2)                                   <---------ARR11(3)
  <---------ANAC58                                          --------->ARR11(3)
  <---------ANAC58                           <-------TEIL   <-----------ARR10
------>NtERF2                               --------->ARR14(1)------>ZmHOX2a(2)
------>SPL7                                <---------GLK1(2)<---------AGP1
-----SPL7                                  --------->ARR11(1)--------->CCA1(2)
----ANAC58     ----------->GT1       <---------MYB46(3)     --------->AGP1
----ANAC58   ---------->DOF2       --------------------->WRI1<------ZmHOX2a(2)   ------->TEIL      -
 
ttcggccttgtcgaagtaaagataaatgctcttctctagtttgttagattcgatttctaagtagatctaagcttgattcaaacgaatttgagagaggtaa  24864900
                                                   <---------ZAT18
                                                   --------->ZAT18
                      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)
                   <-------TEIL                   <---------ANAC46
                  --------->CCA1(2)               <---------ANAC58
                 <---------ARR14(2)               --------->ANAC55(2)
                 --------->ARR11(1)               <---------ANAC58
              <--------P                          <---------ANAC55(2)
            <------MYB46(1)                      --------------->AtSPL3
            <---------ANAC46                     --------------->AtSPL8
            <------MYB83                     <---------ZAT6
           <---------AtMYB61                 <-----------RAV1(1)                                   <
           --------->MYB111(2)            --------->LBD16   <---------AHL20(2)                    --
           --------->MYB59 --------->ATHB12  --------->ALFIN1                                   <---
           --------->MYB111(1)           <---------ANAC58  <---------AHL20(2)                   <---
           --------->MYB46(2)            <---------ANAC58  --------->AHL20(2)                  <----
           <---------MYB46(3)    <-----------GT1<---------ANAC46   <--------P--------->TOE2(3)<-----
----->ZmHOX2a(1) --------->ARR14(2)   --------->GLK1(2)  <----------DOF2     --------->YAB1 <-------
 
tcctattatctggtttggtagattcgagcttgatttgaacgattccgagtgttgcgtactctttaaattggtagtttcaagcttaatttgaacaattgtg  24865000
                                                                                       <---------At4g35610
                                                                                       --------->At4g35610
                                                                                     <------MYB46(1)
                                                                                   <--------P
                                                                                  <---------ANAC58
                                                                                 --------->MYB52(2)
         ------->TEIL                   <------MYB46(1)                          <------MYB46(1)
-------GAMYB                            --------->At4g35610          <----------DOF2 <------MYB83
------->ALFIN1                          <------MYB83             <------ZmHOX2a(2)<---------ANAC46
------ANAC58                            <---------At4g35610     --------->ARR14(2)<-------GAMYB <---
------ANAC58                     ---------->DOF2                <---------ARR14(2)<---------ANAC58<-
-----MYB46(3)                   <---------AHL20(2)            <---------ANAC58   <---------MYB46(3)
----ANAC46           --------->GLK1(2)<-----------RAV1(2)     <---------ANAC58   --------->MYB55(2)
----RAV1(1) <---------YAB1     <---------AHL20(2)    <---------GLK1(2)           <------MYB83   ----
 
ggtgttgcaacgaatttgatagagaatttgataatttaaaggcaggtgaagttttcgattctctggcgatccctttgatgaagttggttgggctgaaaac  24865100
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AGI:  At5g61850.1   
Description:  LFY (LEAFY); transcription factor. Identical to Protein LEAFY (LFY) [Arabidopsis Thaliana] (GB:Q00958;GB:Q8LSH2;GB:Q8LSH3); similar to LEAFY transcription factor [Brassica juncea] (GB:ABF06559.1); contains InterPro domain Floricaula/leafy protein; (InterPro:IPR002910)
Range:  from: 24861521    to: 24864159    Orientation: Forward
Links:  TAIR  MIPS 
 
AGI:  At5g61865.1   
Description:  similar to hypothetical protein [Vitis vinifera] (GB:CAN73072.1)
Range:  from: 24864553    to: 24867018    Orientation: Forward
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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